BLASTX nr result

ID: Cimicifuga21_contig00000944 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00000944
         (1466 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9XG77.1|PSA6_TOBAC RecName: Full=Proteasome subunit alpha ty...   451   e-124
ref|XP_002532723.1| proteasome subunit alpha type, putative [Ric...   449   e-124
ref|XP_003541109.1| PREDICTED: proteasome subunit alpha type-6-l...   448   e-123
ref|XP_002271929.1| PREDICTED: proteasome subunit alpha type-6 i...   446   e-123
ref|XP_004141710.1| PREDICTED: proteasome subunit alpha type-6-l...   446   e-123

>sp|Q9XG77.1|PSA6_TOBAC RecName: Full=Proteasome subunit alpha type-6; AltName: Full=20S
           proteasome alpha subunit A; AltName: Full=20S proteasome
           subunit alpha-1 gi|4539545|emb|CAB39975.1| PRCI
           [Nicotiana tabacum]
          Length = 246

 Score =  451 bits (1161), Expect = e-124
 Identities = 223/246 (90%), Positives = 239/246 (97%)
 Frame = +1

Query: 184 MSRGSGAGYDRHITIFSPEGRLYQVEYAFKAVKASGITSIAVRGKDSVCVVTQKKVPDKL 363
           MSRGSG GYDRHITIFSPEGRL+QVEYAFKAVKA+GITSI VRGKDSVCVVTQKKVPDKL
Sbjct: 1   MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSVCVVTQKKVPDKL 60

Query: 364 LDQTSVTHLFSITKYLGLLATGMTADARSLVQQARNQAAEFRFKWGYEIPVDVLAKWIAD 543
           LDQTSV+HLF ITKYLGLLATGMTADAR+LVQQARN+AAEFRFK+GYE+PVDVL+KWIAD
Sbjct: 61  LDQTSVSHLFPITKYLGLLATGMTADARTLVQQARNEAAEFRFKYGYEMPVDVLSKWIAD 120

Query: 544 KAQVYTQHAYMRPLGVAAMVLGIDEENGPQLFKCDPAGHFFGHKATSAGVKEQEAINFLE 723
           K+QVYTQHAYMRPLGV AM+LGIDEE GPQLFKCDPAGHFFGHKATSAG KEQEAINFLE
Sbjct: 121 KSQVYTQHAYMRPLGVVAMILGIDEEKGPQLFKCDPAGHFFGHKATSAGSKEQEAINFLE 180

Query: 724 KKMKNDPAFSYEETVQTAISALQSVLQEDFKATEIEVGVVRKENPVFRVLSTDEIDEQLT 903
           KKMKNDPAFSYEETVQTAISALQSVLQEDFKA+EIEVGVV+KE+P+FRVL+T+EIDE LT
Sbjct: 181 KKMKNDPAFSYEETVQTAISALQSVLQEDFKASEIEVGVVKKEDPIFRVLTTEEIDEHLT 240

Query: 904 AISERD 921
           AISERD
Sbjct: 241 AISERD 246


>ref|XP_002532723.1| proteasome subunit alpha type, putative [Ricinus communis]
           gi|223527531|gb|EEF29654.1| proteasome subunit alpha
           type, putative [Ricinus communis]
          Length = 246

 Score =  449 bits (1155), Expect = e-124
 Identities = 223/246 (90%), Positives = 237/246 (96%)
 Frame = +1

Query: 184 MSRGSGAGYDRHITIFSPEGRLYQVEYAFKAVKASGITSIAVRGKDSVCVVTQKKVPDKL 363
           MSRGSG GYDRHITIFSPEGRL+QVEYAFKAVKASG+TSI V GKDSVCVVTQKKVPDKL
Sbjct: 1   MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKASGVTSIGVCGKDSVCVVTQKKVPDKL 60

Query: 364 LDQTSVTHLFSITKYLGLLATGMTADARSLVQQARNQAAEFRFKWGYEIPVDVLAKWIAD 543
           LD TSVTHLF ITKYLGLLATGMTADAR+LVQQARN+AAEFRFK+GYE+PVDVLAKWIAD
Sbjct: 61  LDHTSVTHLFPITKYLGLLATGMTADARTLVQQARNEAAEFRFKYGYEMPVDVLAKWIAD 120

Query: 544 KAQVYTQHAYMRPLGVAAMVLGIDEENGPQLFKCDPAGHFFGHKATSAGVKEQEAINFLE 723
           K+Q+YTQHAYMRPLGV AMVLGID+E GP+L+KCDPAGHFFGHKATSAG+KEQEAINFLE
Sbjct: 121 KSQIYTQHAYMRPLGVVAMVLGIDDEYGPRLYKCDPAGHFFGHKATSAGLKEQEAINFLE 180

Query: 724 KKMKNDPAFSYEETVQTAISALQSVLQEDFKATEIEVGVVRKENPVFRVLSTDEIDEQLT 903
           KKMKNDPAF+YEETVQTAISALQSVLQEDFKATEIEVGVVR ENPVFRVLST+EIDE LT
Sbjct: 181 KKMKNDPAFTYEETVQTAISALQSVLQEDFKATEIEVGVVRTENPVFRVLSTEEIDEHLT 240

Query: 904 AISERD 921
           AISERD
Sbjct: 241 AISERD 246


>ref|XP_003541109.1| PREDICTED: proteasome subunit alpha type-6-like [Glycine max]
          Length = 368

 Score =  448 bits (1152), Expect = e-123
 Identities = 221/247 (89%), Positives = 238/247 (96%)
 Frame = +1

Query: 181 KMSRGSGAGYDRHITIFSPEGRLYQVEYAFKAVKASGITSIAVRGKDSVCVVTQKKVPDK 360
           KMSRGSG GYDRHITIFSPEGRL+QVEYAFKAVKA+GITSI VRGKDS+CVVTQKKVPDK
Sbjct: 122 KMSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSICVVTQKKVPDK 181

Query: 361 LLDQTSVTHLFSITKYLGLLATGMTADARSLVQQARNQAAEFRFKWGYEIPVDVLAKWIA 540
           LLD TSVTHLF ITKYLGLLATGMTADAR+LVQQARN+AAEFRF +GYE+PVDVLAKWIA
Sbjct: 182 LLDNTSVTHLFPITKYLGLLATGMTADARTLVQQARNEAAEFRFTYGYEMPVDVLAKWIA 241

Query: 541 DKAQVYTQHAYMRPLGVAAMVLGIDEENGPQLFKCDPAGHFFGHKATSAGVKEQEAINFL 720
           DK+QVYTQHAYMRPLGV AMVLGID+E GPQL+KCDPAGH+FGHKATSAG+K+QEAINFL
Sbjct: 242 DKSQVYTQHAYMRPLGVVAMVLGIDDEYGPQLYKCDPAGHYFGHKATSAGLKDQEAINFL 301

Query: 721 EKKMKNDPAFSYEETVQTAISALQSVLQEDFKATEIEVGVVRKENPVFRVLSTDEIDEQL 900
           EKKMKNDP+F+YEETVQTAISALQSVLQEDFKATEIEVGVVRKENP FRVL+T+EIDE L
Sbjct: 302 EKKMKNDPSFTYEETVQTAISALQSVLQEDFKATEIEVGVVRKENPEFRVLTTEEIDEHL 361

Query: 901 TAISERD 921
           TAISERD
Sbjct: 362 TAISERD 368


>ref|XP_002271929.1| PREDICTED: proteasome subunit alpha type-6 isoform 1 [Vitis
           vinifera] gi|147797489|emb|CAN73517.1| hypothetical
           protein VITISV_005460 [Vitis vinifera]
           gi|297742984|emb|CBI35851.3| unnamed protein product
           [Vitis vinifera]
          Length = 246

 Score =  446 bits (1148), Expect = e-123
 Identities = 220/246 (89%), Positives = 237/246 (96%)
 Frame = +1

Query: 184 MSRGSGAGYDRHITIFSPEGRLYQVEYAFKAVKASGITSIAVRGKDSVCVVTQKKVPDKL 363
           MSRGSG GYDRHITIFSPEGRL+QVEYAFKAVKASGITSI VRGKDSVCVVTQKKVPDKL
Sbjct: 1   MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKASGITSIGVRGKDSVCVVTQKKVPDKL 60

Query: 364 LDQTSVTHLFSITKYLGLLATGMTADARSLVQQARNQAAEFRFKWGYEIPVDVLAKWIAD 543
           LDQTSVTHLF ITK+LGLLATGMTADAR+LVQQARN+AAEFRF++GYE+PVDVLA+WIAD
Sbjct: 61  LDQTSVTHLFPITKFLGLLATGMTADARTLVQQARNEAAEFRFRYGYEMPVDVLARWIAD 120

Query: 544 KAQVYTQHAYMRPLGVAAMVLGIDEENGPQLFKCDPAGHFFGHKATSAGVKEQEAINFLE 723
           K+QVYTQHAYMRPLGV AM+LGID+ENGP+LFKCDPAGHFFGHKATSAG+KEQEAINFLE
Sbjct: 121 KSQVYTQHAYMRPLGVVAMILGIDDENGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLE 180

Query: 724 KKMKNDPAFSYEETVQTAISALQSVLQEDFKATEIEVGVVRKENPVFRVLSTDEIDEQLT 903
           KKMKNDPAFSY+ETVQTAISALQSVLQEDFK  EIEVGVVR ++P FRVLST+EIDE LT
Sbjct: 181 KKMKNDPAFSYDETVQTAISALQSVLQEDFKPNEIEVGVVRTDSPAFRVLSTEEIDEHLT 240

Query: 904 AISERD 921
           AISERD
Sbjct: 241 AISERD 246


>ref|XP_004141710.1| PREDICTED: proteasome subunit alpha type-6-like [Cucumis sativus]
           gi|449480500|ref|XP_004155912.1| PREDICTED: proteasome
           subunit alpha type-6-like [Cucumis sativus]
          Length = 246

 Score =  446 bits (1146), Expect = e-123
 Identities = 218/246 (88%), Positives = 239/246 (97%)
 Frame = +1

Query: 184 MSRGSGAGYDRHITIFSPEGRLYQVEYAFKAVKASGITSIAVRGKDSVCVVTQKKVPDKL 363
           MSRGSG GYDRHITIFSPEGRL+QVEYAFKAVK++G TSI V+G+DSVCVVTQKKVPDKL
Sbjct: 1   MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKSAGTTSIGVKGRDSVCVVTQKKVPDKL 60

Query: 364 LDQTSVTHLFSITKYLGLLATGMTADARSLVQQARNQAAEFRFKWGYEIPVDVLAKWIAD 543
           LDQTSVTHLFSITKYLGLLATG+TADARSLVQQARN+AAEFRF++GYE+PVDVLAKWIAD
Sbjct: 61  LDQTSVTHLFSITKYLGLLATGITADARSLVQQARNEAAEFRFQYGYEMPVDVLAKWIAD 120

Query: 544 KAQVYTQHAYMRPLGVAAMVLGIDEENGPQLFKCDPAGHFFGHKATSAGVKEQEAINFLE 723
           K+QVYTQHAYMRPLGV AMVLGID+E GP+LFKCDPAGHFFGHKATSAG+KEQEAINFLE
Sbjct: 121 KSQVYTQHAYMRPLGVVAMVLGIDDEYGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLE 180

Query: 724 KKMKNDPAFSYEETVQTAISALQSVLQEDFKATEIEVGVVRKENPVFRVLSTDEIDEQLT 903
           KKMKNDPAF+Y+ETVQTAISALQSVLQEDFKATEIEVGVVR +NP+FRVL+T+E+DE LT
Sbjct: 181 KKMKNDPAFTYDETVQTAISALQSVLQEDFKATEIEVGVVRSDNPIFRVLTTEEVDEHLT 240

Query: 904 AISERD 921
           AISERD
Sbjct: 241 AISERD 246


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