BLASTX nr result

ID: Cimicifuga21_contig00000916 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00000916
         (2052 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276749.1| PREDICTED: 20 kDa chaperonin, chloroplastic ...   380   e-102
ref|XP_003546517.1| PREDICTED: 20 kDa chaperonin, chloroplastic-...   379   e-102
ref|XP_002516232.1| groes chaperonin, putative [Ricinus communis...   376   e-101
ref|NP_001241427.1| uncharacterized protein LOC100803033 [Glycin...   375   e-101
gb|AAM77651.1|AF522274_1 cp10-like protein [Gossypium hirsutum]       374   e-101

>ref|XP_002276749.1| PREDICTED: 20 kDa chaperonin, chloroplastic [Vitis vinifera]
           gi|50660327|gb|AAT80888.1| chloroplast chaperonin 21
           [Vitis vinifera] gi|297738526|emb|CBI27771.3| unnamed
           protein product [Vitis vinifera]
          Length = 251

 Score =  380 bits (975), Expect = e-102
 Identities = 195/249 (78%), Positives = 216/249 (86%), Gaps = 2/249 (0%)
 Frame = +1

Query: 193 TGSAISTRSLASFEGLRXXXXXXXXXXXXXI--GLNQRSFKGLVVKAATVVAPKYTTVKP 366
           T   ISTRSL SFEGLR                GL QRSF+ LVV+AATVV PKYT++KP
Sbjct: 3   TAPTISTRSLPSFEGLRPSTVRISSMGLPLKAGGLTQRSFRSLVVRAATVVTPKYTSLKP 62

Query: 367 LGDRVLVKIKTAEEKTTGGILLPSTAQSKPQGGEVVAVGEGKTIGKNKVEISVKTGTQIV 546
           LGDRVLVKIKTAEEKT GGILLP+TAQ+KPQGGEVVAVGEGKTIGKNK++I VKTG Q+V
Sbjct: 63  LGDRVLVKIKTAEEKTVGGILLPTTAQTKPQGGEVVAVGEGKTIGKNKLDICVKTGAQVV 122

Query: 547 YSKYAGTELDFNGSNHLLLKEDDIVGILETDDVKDLKPLNDRVLIKVLEAETQTAGGLFL 726
           YSKYAGTE++FNGSNHL+LKEDDIVGILETDDVKDLKPLNDRVLIKV EAE +TAGGL L
Sbjct: 123 YSKYAGTEVEFNGSNHLILKEDDIVGILETDDVKDLKPLNDRVLIKVAEAEEKTAGGLLL 182

Query: 727 TEASKDKPSIGTVIAVGPGTLDEEGNTKPLTIATGNTVLYSKYAGNDFKGSDGSDYIALR 906
           TEASK+KPSIGTV+AVGPG LDE+G  KPL+++ GNTVLYSKYAGNDFKGSDGSDYIAL+
Sbjct: 183 TEASKEKPSIGTVVAVGPGPLDEDGKRKPLSVSPGNTVLYSKYAGNDFKGSDGSDYIALK 242

Query: 907 ASDVMAVLS 933
           ASD+MAVLS
Sbjct: 243 ASDIMAVLS 251


>ref|XP_003546517.1| PREDICTED: 20 kDa chaperonin, chloroplastic-like [Glycine max]
           gi|255647873|gb|ACU24395.1| unknown [Glycine max]
          Length = 253

 Score =  379 bits (972), Expect = e-102
 Identities = 197/254 (77%), Positives = 217/254 (85%), Gaps = 1/254 (0%)
 Frame = +1

Query: 175 MAVVQVTGSAISTRSLASFEGLRXXXXXXXXXXXXXIG-LNQRSFKGLVVKAATVVAPKY 351
           MA  Q+T  A S+ S ASFEGLR             IG L+QRSF+GLVVKAATVVAPKY
Sbjct: 1   MASAQLTAIA-SSISTASFEGLRPSAVQFASTGRIRIGNLSQRSFRGLVVKAATVVAPKY 59

Query: 352 TTVKPLGDRVLVKIKTAEEKTTGGILLPSTAQSKPQGGEVVAVGEGKTIGKNKVEISVKT 531
           T +KPLGDRVL+KIK AEEKT GGILLPSTAQ+KPQGGEVVAVGEGKT+GKN VEISVKT
Sbjct: 60  TAIKPLGDRVLIKIKEAEEKTEGGILLPSTAQTKPQGGEVVAVGEGKTVGKNNVEISVKT 119

Query: 532 GTQIVYSKYAGTELDFNGSNHLLLKEDDIVGILETDDVKDLKPLNDRVLIKVLEAETQTA 711
           G Q+VYSKYAGTE+DFNG+ HL++K+DDIVGILETDD+KDLKPLNDRVLIKV EAE +T+
Sbjct: 120 GAQVVYSKYAGTEVDFNGTKHLIVKDDDIVGILETDDIKDLKPLNDRVLIKVAEAEEKTS 179

Query: 712 GGLFLTEASKDKPSIGTVIAVGPGTLDEEGNTKPLTIATGNTVLYSKYAGNDFKGSDGSD 891
           GGL LTEA+KDKPSIGTVIAVGPG LDEEGN KPL++  GNTVLYSKYAGNDFKG DGSD
Sbjct: 180 GGLLLTEATKDKPSIGTVIAVGPGHLDEEGNRKPLSVTPGNTVLYSKYAGNDFKGKDGSD 239

Query: 892 YIALRASDVMAVLS 933
           YI LR SDVMAVLS
Sbjct: 240 YITLRVSDVMAVLS 253


>ref|XP_002516232.1| groes chaperonin, putative [Ricinus communis]
           gi|223544718|gb|EEF46234.1| groes chaperonin, putative
           [Ricinus communis]
          Length = 253

 Score =  376 bits (965), Expect = e-101
 Identities = 190/255 (74%), Positives = 224/255 (87%), Gaps = 2/255 (0%)
 Frame = +1

Query: 175 MAVVQVTGSAIS--TRSLASFEGLRXXXXXXXXXXXXXIGLNQRSFKGLVVKAATVVAPK 348
           MA  Q+T S++S   R+L SFEGLR              GL+QRSF+ LVVKAATVVAPK
Sbjct: 1   MATAQLTASSVSLSARNLTSFEGLRPSTVKFASLKAG--GLSQRSFRSLVVKAATVVAPK 58

Query: 349 YTTVKPLGDRVLVKIKTAEEKTTGGILLPSTAQSKPQGGEVVAVGEGKTIGKNKVEISVK 528
           YT++KPLGDRVL+KIK AEEKT GGILLP++AQ+KPQGGEVVAVGEG+TIGKNK++ISVK
Sbjct: 59  YTSIKPLGDRVLLKIKVAEEKTDGGILLPTSAQTKPQGGEVVAVGEGRTIGKNKLDISVK 118

Query: 529 TGTQIVYSKYAGTELDFNGSNHLLLKEDDIVGILETDDVKDLKPLNDRVLIKVLEAETQT 708
           TG Q+VYSKYAGTE++FNGS+HL+LKEDDIVG+LETDD+KDLKPLNDRV IK+ +AE +T
Sbjct: 119 TGAQVVYSKYAGTEVEFNGSSHLILKEDDIVGVLETDDIKDLKPLNDRVFIKIADAEEKT 178

Query: 709 AGGLFLTEASKDKPSIGTVIAVGPGTLDEEGNTKPLTIATGNTVLYSKYAGNDFKGSDGS 888
           AGGL LTEA+K+KPSIGTVIAVGPGTLDEEGN +PL+++ GN+VLYSKYAGNDFKGSDG+
Sbjct: 179 AGGLLLTEATKEKPSIGTVIAVGPGTLDEEGNRRPLSVSPGNSVLYSKYAGNDFKGSDGT 238

Query: 889 DYIALRASDVMAVLS 933
           +YIALRASDVMAVLS
Sbjct: 239 NYIALRASDVMAVLS 253


>ref|NP_001241427.1| uncharacterized protein LOC100803033 [Glycine max]
           gi|255645102|gb|ACU23050.1| unknown [Glycine max]
          Length = 253

 Score =  375 bits (962), Expect = e-101
 Identities = 195/247 (78%), Positives = 214/247 (86%), Gaps = 2/247 (0%)
 Frame = +1

Query: 199 SAISTR-SLASFEGLRXXXXXXXXXXXXXIG-LNQRSFKGLVVKAATVVAPKYTTVKPLG 372
           SAIS+  S ASFEGLR             IG L+QRSF+GLVVKAATVVAPKYT +KPLG
Sbjct: 7   SAISSSISTASFEGLRPSAVQFASAGRIRIGNLSQRSFRGLVVKAATVVAPKYTAIKPLG 66

Query: 373 DRVLVKIKTAEEKTTGGILLPSTAQSKPQGGEVVAVGEGKTIGKNKVEISVKTGTQIVYS 552
           DRVL+KIK AEEKT GGILLPSTAQ+KPQGGEVVAVGEGKTIGKN VEISVKTG Q+VYS
Sbjct: 67  DRVLIKIKEAEEKTEGGILLPSTAQTKPQGGEVVAVGEGKTIGKNNVEISVKTGAQVVYS 126

Query: 553 KYAGTELDFNGSNHLLLKEDDIVGILETDDVKDLKPLNDRVLIKVLEAETQTAGGLFLTE 732
           KYAGTE+DF+G+ HL++K+DDIVGILETDD+KDLKPLNDRVLIKV EAE +T+GGL LTE
Sbjct: 127 KYAGTEVDFDGTKHLIVKDDDIVGILETDDIKDLKPLNDRVLIKVAEAEEKTSGGLLLTE 186

Query: 733 ASKDKPSIGTVIAVGPGTLDEEGNTKPLTIATGNTVLYSKYAGNDFKGSDGSDYIALRAS 912
           A+KDKPSIGTVIAVGPG LDEEGN KPL++  GNTVLYSKYAGNDFKG DGSDYI LR S
Sbjct: 187 ATKDKPSIGTVIAVGPGHLDEEGNRKPLSVTPGNTVLYSKYAGNDFKGKDGSDYITLRVS 246

Query: 913 DVMAVLS 933
           DVMAVLS
Sbjct: 247 DVMAVLS 253


>gb|AAM77651.1|AF522274_1 cp10-like protein [Gossypium hirsutum]
          Length = 256

 Score =  374 bits (959), Expect = e-101
 Identities = 195/256 (76%), Positives = 218/256 (85%), Gaps = 3/256 (1%)
 Frame = +1

Query: 175 MAVVQVTGSAI--STRSLASFEGLRXXXXXXXXXXXXXIG-LNQRSFKGLVVKAATVVAP 345
           MA  Q+T S++  S R+LAS +GLR              G +  RSF+GLVVKAATVVAP
Sbjct: 1   MATSQLTASSVTASARNLASLQGLRLSTVKFSSFGTLKPGAVTSRSFRGLVVKAATVVAP 60

Query: 346 KYTTVKPLGDRVLVKIKTAEEKTTGGILLPSTAQSKPQGGEVVAVGEGKTIGKNKVEISV 525
           KYT+VKPLGDRVLVKIK  EEKT GGILLP+TAQSKPQGGEVVAVGEGKTIG  K E SV
Sbjct: 61  KYTSVKPLGDRVLVKIKETEEKTEGGILLPTTAQSKPQGGEVVAVGEGKTIGNTKSESSV 120

Query: 526 KTGTQIVYSKYAGTELDFNGSNHLLLKEDDIVGILETDDVKDLKPLNDRVLIKVLEAETQ 705
           KTG Q++YSKYAGTE++FNG+NHLLLKEDDIVG+LETDD+KDLKPLNDRV IKV EAE +
Sbjct: 121 KTGAQVIYSKYAGTEVEFNGANHLLLKEDDIVGLLETDDIKDLKPLNDRVFIKVSEAEEK 180

Query: 706 TAGGLFLTEASKDKPSIGTVIAVGPGTLDEEGNTKPLTIATGNTVLYSKYAGNDFKGSDG 885
           TAGGL LTEASK+KPSIGTVIAVGPGTLDEEGN KPL+++ GNTVLYSKYAGNDFKG+DG
Sbjct: 181 TAGGLLLTEASKEKPSIGTVIAVGPGTLDEEGNLKPLSVSPGNTVLYSKYAGNDFKGNDG 240

Query: 886 SDYIALRASDVMAVLS 933
           S+YIALRASDVMAVLS
Sbjct: 241 SNYIALRASDVMAVLS 256


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