BLASTX nr result

ID: Cimicifuga21_contig00000898 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00000898
         (715 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK35283.1| deoxyxylulose-5-phosphate synthase [Adonis aestiv...   134   2e-29
dbj|BAF98289.1| 1-deoxy-D-xylulose 5-phosphate synthase [Hevea b...   101   2e-19
gb|ABF18929.1| putative 1-deoxy-D-xylulose 5-phosphate synthase ...   101   2e-19
ref|XP_002266925.1| PREDICTED: probable 1-deoxy-D-xylulose-5-pho...   100   2e-19
ref|XP_003530592.1| PREDICTED: probable 1-deoxy-D-xylulose-5-pho...   100   3e-19

>gb|ABK35283.1| deoxyxylulose-5-phosphate synthase [Adonis aestivalis var.
           palaestina]
          Length = 717

 Score =  134 bits (336), Expect = 2e-29
 Identities = 76/143 (53%), Positives = 91/143 (63%), Gaps = 1/143 (0%)
 Frame = -2

Query: 477 MSVSTYLGTRTST-FTPSLQVRKQANLNSRRGPFFVKACATSSDGEEIKLVKKENEXAYP 301
           M+VS++L TRTST F PS++   Q   NSRR                             
Sbjct: 1   MTVSSFLPTRTSTTFCPSVRTPAQPLFNSRR----------------------------- 31

Query: 300 SSNSSGLYQFFVKACATSSDGEEIKLVKKENEGVKIEYTAEKPLTPLLDTINYPPHMKNL 121
                   +FFVKAC  SSDG+E+KLV++E+E +++EYT EKP TPLLDTINYPPHMKNL
Sbjct: 32  --------KFFVKACVNSSDGQEVKLVRQESEPLQVEYTKEKPQTPLLDTINYPPHMKNL 83

Query: 120 TTQELEQLASELRADIVHSVSKT 52
            TQELEQLA+ELRADIVHSVSKT
Sbjct: 84  NTQELEQLAAELRADIVHSVSKT 106


>dbj|BAF98289.1| 1-deoxy-D-xylulose 5-phosphate synthase [Hevea brasiliensis]
          Length = 711

 Score =  101 bits (251), Expect = 2e-19
 Identities = 51/84 (60%), Positives = 64/84 (76%)
 Frame = -2

Query: 303 PSSNSSGLYQFFVKACATSSDGEEIKLVKKENEGVKIEYTAEKPLTPLLDTINYPPHMKN 124
           P SN  G  QF ++A A   D E   +++KE +G KI+++ EKP TPLLDTINYP H KN
Sbjct: 21  PRSNLCGRKQFCLRASAGHPDEEGKMMIRKEKDGWKIDFSGEKPPTPLLDTINYPVHTKN 80

Query: 123 LTTQELEQLASELRADIVHSVSKT 52
           L+TQ+LEQLA+ELRADIV+SVSKT
Sbjct: 81  LSTQDLEQLAAELRADIVYSVSKT 104


>gb|ABF18929.1| putative 1-deoxy-D-xylulose 5-phosphate synthase [Hevea
           brasiliensis]
          Length = 711

 Score =  101 bits (251), Expect = 2e-19
 Identities = 51/84 (60%), Positives = 64/84 (76%)
 Frame = -2

Query: 303 PSSNSSGLYQFFVKACATSSDGEEIKLVKKENEGVKIEYTAEKPLTPLLDTINYPPHMKN 124
           P SN  G  QF ++A A   D E   +++KE +G KI+++ EKP TPLLDTINYP H KN
Sbjct: 21  PRSNLCGRKQFCLRASAGHPDEEGKMMIRKEKDGWKIDFSGEKPPTPLLDTINYPVHTKN 80

Query: 123 LTTQELEQLASELRADIVHSVSKT 52
           L+TQ+LEQLA+ELRADIV+SVSKT
Sbjct: 81  LSTQDLEQLAAELRADIVYSVSKT 104


>ref|XP_002266925.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
           chloroplastic [Vitis vinifera]
           gi|296090521|emb|CBI40852.3| unnamed protein product
           [Vitis vinifera]
          Length = 718

 Score =  100 bits (250), Expect = 2e-19
 Identities = 57/87 (65%), Positives = 68/87 (78%), Gaps = 3/87 (3%)
 Frame = -2

Query: 303 PSSNSSGLYQFFVKACATS-SDGEE-IKLVKKENEGV-KIEYTAEKPLTPLLDTINYPPH 133
           P  + SG  Q  ++ACA + SDGEE  K+ +KE +G  KIE+T EKP TPLLDTINYP H
Sbjct: 21  PRPSLSGRKQSCLRACAANTSDGEEGNKMTRKEKDGGWKIEFTGEKPPTPLLDTINYPVH 80

Query: 132 MKNLTTQELEQLASELRADIVHSVSKT 52
           MKNL+TQ+LEQLA+ELRADIV SVSKT
Sbjct: 81  MKNLSTQDLEQLAAELRADIVQSVSKT 107


>ref|XP_003530592.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
           chloroplastic-like [Glycine max]
          Length = 714

 Score =  100 bits (249), Expect = 3e-19
 Identities = 50/84 (59%), Positives = 62/84 (73%)
 Frame = -2

Query: 303 PSSNSSGLYQFFVKACATSSDGEEIKLVKKENEGVKIEYTAEKPLTPLLDTINYPPHMKN 124
           PS    G  +F V+  A+ S  EE  +++KE  G KI Y+ EKP TPLLDT+N+P HMKN
Sbjct: 24  PSPYQGGRNKFCVRVSASGSADEERTIIRKEKVGWKINYSGEKPATPLLDTVNHPIHMKN 83

Query: 123 LTTQELEQLASELRADIVHSVSKT 52
           L+TQ+LEQLA+ELRADIVHSVS T
Sbjct: 84  LSTQDLEQLAAELRADIVHSVSDT 107


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