BLASTX nr result

ID: Cimicifuga21_contig00000895 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00000895
         (1450 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279009.1| PREDICTED: uncharacterized protein LOC100266...   377   e-102
ref|XP_002298232.1| predicted protein [Populus trichocarpa] gi|2...   368   2e-99
gb|AFK33576.1| unknown [Lotus japonicus]                              364   3e-98
ref|XP_003546951.1| PREDICTED: uncharacterized protein LOC100785...   364   3e-98
ref|XP_002516000.1| nucleic acid binding protein, putative [Rici...   363   5e-98

>ref|XP_002279009.1| PREDICTED: uncharacterized protein LOC100266864 [Vitis vinifera]
          Length = 476

 Score =  377 bits (968), Expect = e-102
 Identities = 197/296 (66%), Positives = 233/296 (78%)
 Frame = +3

Query: 288  EAVKSPSLDYSHFVSLPLGIHPDLVDKLMNFQNSILGTNDNGKDEKVCSESWGEASDGTD 467
            E VKSP+LDYSHF+SLPL I+P+LVDKL++FQNSILG  +  KDE + SES  E SD  D
Sbjct: 187  EVVKSPNLDYSHFISLPLAIYPELVDKLVSFQNSILG--NPCKDENLDSESNEETSDDED 244

Query: 468  NNSQQLHGGVDVASKLKGKDEYEQVKAEIKKIPVVGYPPKASKSSNLSDLGIEKSIFIKP 647
               QQL   +DVA +LK +D+ + VK +I  I +  YPPK SK S  S+LGIEKSIFIKP
Sbjct: 245  ---QQLDRQLDVAVELKVEDDSKHVKVDITNISLRSYPPKTSKPSAPSELGIEKSIFIKP 301

Query: 648  KQFHLTVLMLKLWNNERVTVATAVLQRVSSKVIDALEGRPVSVRLKGLESMSGSFAEARV 827
            K FHLTVLMLKLWN ERV  A  VLQ +SSKV++AL+ RPVS+RLKGL+ M GS ++ARV
Sbjct: 302  KTFHLTVLMLKLWNKERVDAAAKVLQNISSKVMEALDDRPVSIRLKGLDCMRGSLSKARV 361

Query: 828  LYTPVEVIGGEDRLLRACQVITDAYIEAGLVLEKDARRKLKLHGTVMNARHRKRKSEERT 1007
            LY PV  IG EDRLL ACQVI DAY+EAGLVL+KD  +KLKLH TVMNARHRKRK  ++T
Sbjct: 362  LYAPVVEIGSEDRLLLACQVIIDAYVEAGLVLDKDRGQKLKLHATVMNARHRKRK--KKT 419

Query: 1008 KRFDSFDARGIVEQYGSEDWGEYIIPEVHLSQRFVFGENGYYHCCASIPLPKDEHV 1175
            ++ DSFDARGI +QYGSE+WG+YII E HLSQRFVF ENGYYHCCASIP P++  V
Sbjct: 420  RKSDSFDARGIFKQYGSEEWGDYIIREAHLSQRFVFDENGYYHCCASIPFPENMQV 475


>ref|XP_002298232.1| predicted protein [Populus trichocarpa] gi|222845490|gb|EEE83037.1|
            predicted protein [Populus trichocarpa]
          Length = 440

 Score =  368 bits (944), Expect = 2e-99
 Identities = 190/294 (64%), Positives = 228/294 (77%)
 Frame = +3

Query: 288  EAVKSPSLDYSHFVSLPLGIHPDLVDKLMNFQNSILGTNDNGKDEKVCSESWGEASDGTD 467
            EA++S SLDYSHF+SLPL I+P+L DKL+NFQNSILGTND   DE + S+S  +  D   
Sbjct: 149  EAIES-SLDYSHFISLPLAIYPELTDKLVNFQNSILGTNDVSADENLESDSIEDTLD-IK 206

Query: 468  NNSQQLHGGVDVASKLKGKDEYEQVKAEIKKIPVVGYPPKASKSSNLSDLGIEKSIFIKP 647
            N  Q+L  G DVA +LK +DE + VK ++  IP V YPPK  +  N SD GI+KSIFIKP
Sbjct: 207  NKGQELIKGRDVAVELKVEDE-KHVKVDLTSIPFVSYPPKPPRLPNASDFGIDKSIFIKP 265

Query: 648  KQFHLTVLMLKLWNNERVTVATAVLQRVSSKVIDALEGRPVSVRLKGLESMSGSFAEARV 827
              FHLTVLMLKLWN ERV  A+ VL+ +SSKVIDAL+ RP+S+RLKGL++M GS ++ARV
Sbjct: 266  TTFHLTVLMLKLWNKERVNAASGVLKSISSKVIDALDNRPISIRLKGLDTMRGSLSKARV 325

Query: 828  LYTPVEVIGGEDRLLRACQVITDAYIEAGLVLEKDARRKLKLHGTVMNARHRKRKSEERT 1007
            LY PVE IG E RLL ACQVI +A++EAGLVLEKDA++KLKLH TVMNARHRK +     
Sbjct: 326  LYAPVEEIGSEGRLLSACQVIINAFVEAGLVLEKDAKQKLKLHATVMNARHRKGR----- 380

Query: 1008 KRFDSFDARGIVEQYGSEDWGEYIIPEVHLSQRFVFGENGYYHCCASIPLPKDE 1169
            ++ DSFDARGI +Q+GSEDWGEY+I E HLSQRFVF ENGYYHCCASIP P  E
Sbjct: 381  RKNDSFDARGIFKQFGSEDWGEYLIREAHLSQRFVFDENGYYHCCASIPFPGKE 434


>gb|AFK33576.1| unknown [Lotus japonicus]
          Length = 504

 Score =  364 bits (935), Expect = 3e-98
 Identities = 191/298 (64%), Positives = 224/298 (75%), Gaps = 2/298 (0%)
 Frame = +3

Query: 288  EAVKSPSLDYSHFVSLPLGIHPDLVDKLMNFQNSILGTNDNGKDEKVCSESWGEASDGT- 464
            EAV+S +LDYSHFVSLPL I+P+LVDKL +FQ+SILG  D+  DE + ++S  E  D T 
Sbjct: 209  EAVRSRNLDYSHFVSLPLAIYPELVDKLFDFQHSILGDGDSCIDENLDTDS-NEDEDTTV 267

Query: 465  -DNNSQQLHGGVDVASKLKGKDEYEQVKAEIKKIPVVGYPPKASKSSNLSDLGIEKSIFI 641
             +   Q      DVA +LK  D+ E VK  +  I +V Y PKASKSS  SDLGI+KSIFI
Sbjct: 268  VEEADQLSKKNADVAVELKVADDSESVKVNLTNISLVSYAPKASKSSAPSDLGIDKSIFI 327

Query: 642  KPKQFHLTVLMLKLWNNERVTVATAVLQRVSSKVIDALEGRPVSVRLKGLESMSGSFAEA 821
            KPK FHLTVLMLKLWN +RV  AT +LQ +SSKVI+AL+ RPVS+RLKGLE M GS A+A
Sbjct: 328  KPKTFHLTVLMLKLWNKDRVKTATEILQNISSKVIEALDNRPVSIRLKGLECMKGSMAKA 387

Query: 822  RVLYTPVEVIGGEDRLLRACQVITDAYIEAGLVLEKDARRKLKLHGTVMNARHRKRKSEE 1001
            RVLY PVE IG E RL RACQVI DAY+EAGLVLE DA ++LK H TVMN+RHRKR  ++
Sbjct: 388  RVLYAPVEEIGCEGRLFRACQVIIDAYVEAGLVLENDANQRLKFHATVMNSRHRKRAKQK 447

Query: 1002 RTKRFDSFDARGIVEQYGSEDWGEYIIPEVHLSQRFVFGENGYYHCCASIPLPKDEHV 1175
            R    DSFDARGI +QYGSEDWGEY+I E HLSQRF F E GYYHCCASIP P++  V
Sbjct: 448  R--NVDSFDARGIFKQYGSEDWGEYLIREAHLSQRFSFDEKGYYHCCASIPFPENMQV 503


>ref|XP_003546951.1| PREDICTED: uncharacterized protein LOC100785531 [Glycine max]
          Length = 510

 Score =  364 bits (935), Expect = 3e-98
 Identities = 189/300 (63%), Positives = 225/300 (75%), Gaps = 4/300 (1%)
 Frame = +3

Query: 288  EAVKSPSLDYSHFVSLPLGIHPDLVDKLMNFQNSILGTNDNGKDEKVCSESWGEASDGTD 467
            E V S +LDYSHF+SLPL IHP+LV+KL++FQ+SILG   +  DE   +ES     +GT 
Sbjct: 218  ETVNSRNLDYSHFISLPLAIHPELVNKLISFQHSILGIG-SCMDENTYTESDSNEDEGTT 276

Query: 468  NNSQQLHG----GVDVASKLKGKDEYEQVKAEIKKIPVVGYPPKASKSSNLSDLGIEKSI 635
             +++++         VA +LK  D  E VK  +  IP+V Y PKASKSS  SDLGI+KSI
Sbjct: 277  TDTKEVDQLSKENSGVAVELKANDNSESVKVNLTNIPLVSYAPKASKSSAPSDLGIDKSI 336

Query: 636  FIKPKQFHLTVLMLKLWNNERVTVATAVLQRVSSKVIDALEGRPVSVRLKGLESMSGSFA 815
            FIKPK FHLTVLMLKLWNNER+  A+ VLQ +SSKV++AL+ RP+S+RLKGLE M GS A
Sbjct: 337  FIKPKTFHLTVLMLKLWNNERIKTASEVLQSISSKVMEALDNRPLSIRLKGLECMKGSLA 396

Query: 816  EARVLYTPVEVIGGEDRLLRACQVITDAYIEAGLVLEKDARRKLKLHGTVMNARHRKRKS 995
            +ARVLY PVE I  E RLLRACQVI DAY+EAGLVLE DA++KLKLH TVMNARHRKRK 
Sbjct: 397  KARVLYAPVEEIASEGRLLRACQVIIDAYVEAGLVLENDAKQKLKLHATVMNARHRKRK- 455

Query: 996  EERTKRFDSFDARGIVEQYGSEDWGEYIIPEVHLSQRFVFGENGYYHCCASIPLPKDEHV 1175
                   DSFDARGI +QYGSEDWG+Y+I E HLSQRF F ENGYYHCCASIP P++  V
Sbjct: 456  ------VDSFDARGIFKQYGSEDWGQYLIREAHLSQRFSFDENGYYHCCASIPFPENMQV 509


>ref|XP_002516000.1| nucleic acid binding protein, putative [Ricinus communis]
            gi|223544905|gb|EEF46420.1| nucleic acid binding protein,
            putative [Ricinus communis]
          Length = 416

 Score =  363 bits (933), Expect = 5e-98
 Identities = 190/292 (65%), Positives = 225/292 (77%)
 Frame = +3

Query: 288  EAVKSPSLDYSHFVSLPLGIHPDLVDKLMNFQNSILGTNDNGKDEKVCSESWGEASDGTD 467
            EAVKSPSLDYSHF+SLPL IHP+LVDKL NFQN+ILG  D    + + S+S  + SD  +
Sbjct: 124  EAVKSPSLDYSHFISLPLAIHPELVDKLFNFQNTILGEADASLVQTMESDSNEDTSDD-E 182

Query: 468  NNSQQLHGGVDVASKLKGKDEYEQVKAEIKKIPVVGYPPKASKSSNLSDLGIEKSIFIKP 647
            N  QQ      VA +LK +D+   VK ++  IP+V Y PKASKS  LS LGI++SIFIKP
Sbjct: 183  NKDQQSSKENGVAVELKVEDD-RHVKVDLTSIPLVSYAPKASKSPTLSGLGIDRSIFIKP 241

Query: 648  KQFHLTVLMLKLWNNERVTVATAVLQRVSSKVIDALEGRPVSVRLKGLESMSGSFAEARV 827
            K FHLTVLMLKLWN ER+  A+ VL+ VS KV+DAL+ RP+SVRLKGL+ M GS A+ARV
Sbjct: 242  KTFHLTVLMLKLWNKERINAASEVLKSVSLKVMDALDNRPLSVRLKGLDCMRGSMAKARV 301

Query: 828  LYTPVEVIGGEDRLLRACQVITDAYIEAGLVLEKDARRKLKLHGTVMNARHRKRKSEERT 1007
            LY  VE IG E RLLRACQVI DA++ AGLVLEKDA++KLKLH TVMN+RHRK K   R 
Sbjct: 302  LYATVEEIGNEGRLLRACQVIIDAFVGAGLVLEKDAKQKLKLHATVMNSRHRKGKM--RK 359

Query: 1008 KRFDSFDARGIVEQYGSEDWGEYIIPEVHLSQRFVFGENGYYHCCASIPLPK 1163
             ++DSFDARGI +Q+GSE+WGEY I E HLSQRFVF ENGYYHCCASIP P+
Sbjct: 360  NKYDSFDARGIFKQFGSEEWGEYPIREAHLSQRFVFDENGYYHCCASIPFPE 411


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