BLASTX nr result

ID: Cimicifuga21_contig00000877 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00000877
         (729 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22196.3| unnamed protein product [Vitis vinifera]              270   2e-70
ref|XP_002283325.1| PREDICTED: protein SET [Vitis vinifera]           270   2e-70
ref|XP_002275632.1| PREDICTED: protein SET [Vitis vinifera] gi|2...   265   9e-69
emb|CAN60194.1| hypothetical protein VITISV_038571 [Vitis vinifera]   265   9e-69
ref|XP_002323845.1| nucleosome/chromatin assembly factor group [...   258   1e-66

>emb|CBI22196.3| unnamed protein product [Vitis vinifera]
          Length = 253

 Score =  270 bits (690), Expect = 2e-70
 Identities = 140/204 (68%), Positives = 160/204 (78%), Gaps = 1/204 (0%)
 Frame = +3

Query: 120 MGADKGKKSKI-ERGEEDDSDQIDGXXXXXXXXXXXXXXXXXXXXIDGELVLSIEKLQEV 296
           M ADKGKKSK+ +R  EDD+D IDG                       ELVLSIEKLQE+
Sbjct: 1   MVADKGKKSKVSDRIVEDDADHIDG-----------------------ELVLSIEKLQEL 37

Query: 297 QDELEKVNEEASDKVLEVEQKYNEIRRPVYVKRTDIIKGIPQFWITAFTSHPAIADILNE 476
           QDELEKVNEEASDKVLEVEQKYNEIRRPVYVKR +IIK IP FW+TAF SHPA+ D+L+E
Sbjct: 38  QDELEKVNEEASDKVLEVEQKYNEIRRPVYVKRNEIIKSIPDFWLTAFLSHPALCDLLSE 97

Query: 477 EDHKIFKYLNYIDVEDFKDLKSGYSISFHFNPNPYFEETKLTKTFSFSDEGITKIDGTTI 656
           ED KIFKYL+ ++VEDFKD+KSGYSI+F+FN NPYFE+TKLTKTF+F DEG TKI GT I
Sbjct: 98  EDQKIFKYLDSLEVEDFKDVKSGYSIAFNFNQNPYFEDTKLTKTFTFFDEGTTKITGTAI 157

Query: 657 KWKEGNGIANGDNHEKKGNKRPFS 728
           KWKEG G +NG NH+KK NKRPF+
Sbjct: 158 KWKEGMGASNGVNHDKK-NKRPFA 180


>ref|XP_002283325.1| PREDICTED: protein SET [Vitis vinifera]
          Length = 255

 Score =  270 bits (690), Expect = 2e-70
 Identities = 140/204 (68%), Positives = 160/204 (78%), Gaps = 1/204 (0%)
 Frame = +3

Query: 120 MGADKGKKSKI-ERGEEDDSDQIDGXXXXXXXXXXXXXXXXXXXXIDGELVLSIEKLQEV 296
           M ADKGKKSK+ +R  EDD+D IDG                       ELVLSIEKLQE+
Sbjct: 1   MVADKGKKSKVSDRIVEDDADHIDG-----------------------ELVLSIEKLQEL 37

Query: 297 QDELEKVNEEASDKVLEVEQKYNEIRRPVYVKRTDIIKGIPQFWITAFTSHPAIADILNE 476
           QDELEKVNEEASDKVLEVEQKYNEIRRPVYVKR +IIK IP FW+TAF SHPA+ D+L+E
Sbjct: 38  QDELEKVNEEASDKVLEVEQKYNEIRRPVYVKRNEIIKSIPDFWLTAFLSHPALCDLLSE 97

Query: 477 EDHKIFKYLNYIDVEDFKDLKSGYSISFHFNPNPYFEETKLTKTFSFSDEGITKIDGTTI 656
           ED KIFKYL+ ++VEDFKD+KSGYSI+F+FN NPYFE+TKLTKTF+F DEG TKI GT I
Sbjct: 98  EDQKIFKYLDSLEVEDFKDVKSGYSIAFNFNQNPYFEDTKLTKTFTFFDEGTTKITGTAI 157

Query: 657 KWKEGNGIANGDNHEKKGNKRPFS 728
           KWKEG G +NG NH+KK NKRPF+
Sbjct: 158 KWKEGMGASNGVNHDKK-NKRPFA 180


>ref|XP_002275632.1| PREDICTED: protein SET [Vitis vinifera]
           gi|297733991|emb|CBI15238.3| unnamed protein product
           [Vitis vinifera]
          Length = 268

 Score =  265 bits (676), Expect = 9e-69
 Identities = 134/204 (65%), Positives = 158/204 (77%), Gaps = 1/204 (0%)
 Frame = +3

Query: 120 MGADKGKKSK-IERGEEDDSDQIDGXXXXXXXXXXXXXXXXXXXXIDGELVLSIEKLQEV 296
           M ADKGKK K  E+ EE +SD IDG                       +LVLSIEKLQE+
Sbjct: 1   MVADKGKKLKQSEKEEEVNSDHIDG-----------------------DLVLSIEKLQEI 37

Query: 297 QDELEKVNEEASDKVLEVEQKYNEIRRPVYVKRTDIIKGIPQFWITAFTSHPAIADILNE 476
           QD+LEK+NEEASDKVLEVEQKYNEIR+P+Y KR DIIK IP FW+TAF SHPA+ D+L+E
Sbjct: 38  QDDLEKINEEASDKVLEVEQKYNEIRKPIYDKRNDIIKSIPDFWLTAFLSHPALGDLLSE 97

Query: 477 EDHKIFKYLNYIDVEDFKDLKSGYSISFHFNPNPYFEETKLTKTFSFSDEGITKIDGTTI 656
           ED KIFKYL+ ++VEDFKD+KSGYSI+F+FNPNP+FE+TKL KTF+F DEGITKI  T+I
Sbjct: 98  EDQKIFKYLSSLEVEDFKDVKSGYSITFNFNPNPFFEDTKLKKTFTFLDEGITKISVTSI 157

Query: 657 KWKEGNGIANGDNHEKKGNKRPFS 728
           KWK+G GI NG NHEKKGNKRP +
Sbjct: 158 KWKDGMGIPNGVNHEKKGNKRPIA 181


>emb|CAN60194.1| hypothetical protein VITISV_038571 [Vitis vinifera]
          Length = 249

 Score =  265 bits (676), Expect = 9e-69
 Identities = 134/204 (65%), Positives = 158/204 (77%), Gaps = 1/204 (0%)
 Frame = +3

Query: 120 MGADKGKKSK-IERGEEDDSDQIDGXXXXXXXXXXXXXXXXXXXXIDGELVLSIEKLQEV 296
           M ADKGKK K  E+ EE +SD IDG                       +LVLSIEKLQE+
Sbjct: 1   MVADKGKKLKQSEKEEEVNSDHIDG-----------------------DLVLSIEKLQEI 37

Query: 297 QDELEKVNEEASDKVLEVEQKYNEIRRPVYVKRTDIIKGIPQFWITAFTSHPAIADILNE 476
           QD+LEK+NEEASDKVLEVEQKYNEIR+P+Y KR DIIK IP FW+TAF SHPA+ D+L+E
Sbjct: 38  QDDLEKINEEASDKVLEVEQKYNEIRKPIYDKRNDIIKSIPDFWLTAFLSHPALGDLLSE 97

Query: 477 EDHKIFKYLNYIDVEDFKDLKSGYSISFHFNPNPYFEETKLTKTFSFSDEGITKIDGTTI 656
           ED KIFKYL+ ++VEDFKD+KSGYSI+F+FNPNP+FE+TKL KTF+F DEGITKI  T+I
Sbjct: 98  EDQKIFKYLSSLEVEDFKDVKSGYSITFNFNPNPFFEDTKLKKTFTFLDEGITKISVTSI 157

Query: 657 KWKEGNGIANGDNHEKKGNKRPFS 728
           KWK+G GI NG NHEKKGNKRP +
Sbjct: 158 KWKDGMGIPNGVNHEKKGNKRPIA 181


>ref|XP_002323845.1| nucleosome/chromatin assembly factor group [Populus trichocarpa]
           gi|222866847|gb|EEF03978.1| nucleosome/chromatin
           assembly factor group [Populus trichocarpa]
          Length = 219

 Score =  258 bits (658), Expect = 1e-66
 Identities = 129/203 (63%), Positives = 150/203 (73%)
 Frame = +3

Query: 120 MGADKGKKSKIERGEEDDSDQIDGXXXXXXXXXXXXXXXXXXXXIDGELVLSIEKLQEVQ 299
           M ADKGKK K+   EE D                          IDGELV+SIEKLQE+Q
Sbjct: 1   MVADKGKKLKVTEEEETDH-------------------------IDGELVISIEKLQELQ 35

Query: 300 DELEKVNEEASDKVLEVEQKYNEIRRPVYVKRTDIIKGIPQFWITAFTSHPAIADILNEE 479
           DELEK+NE+ASD+VLE+EQKYNE+RRPVY KR DIIK IP FW+TAF SHPA+ D+L E+
Sbjct: 36  DELEKINEQASDEVLEIEQKYNEVRRPVYTKRNDIIKCIPDFWLTAFLSHPALCDLLTED 95

Query: 480 DHKIFKYLNYIDVEDFKDLKSGYSISFHFNPNPYFEETKLTKTFSFSDEGITKIDGTTIK 659
           D KIFKYL+ + VED KD+KSGYSI+F+F  NP+FE+TKL KTF+FSDEG TKI GT IK
Sbjct: 96  DQKIFKYLDSLHVEDSKDVKSGYSITFNFKENPHFEDTKLIKTFTFSDEGTTKITGTDIK 155

Query: 660 WKEGNGIANGDNHEKKGNKRPFS 728
           WKEG G ANG NHEKKGNKRP +
Sbjct: 156 WKEGMGTANGGNHEKKGNKRPLA 178


Top