BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00000843
         (1189 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30112.3| unnamed protein product [Vitis vinifera]              365   1e-98
ref|XP_002273311.1| PREDICTED: ribosomal RNA small subunit methy...   363   5e-98
ref|XP_002275293.1| PREDICTED: ribosomal RNA small subunit methy...   363   5e-98
ref|XP_002531546.1| Nucleolar essential protein, putative [Ricin...   357   4e-96
gb|AFK49467.1| unknown [Lotus japonicus]                              355   1e-95

>emb|CBI30112.3| unnamed protein product [Vitis vinifera]
          Length = 319

 Score =  365 bits (937), Expect = 1e-98
 Identities = 185/278 (66%), Positives = 214/278 (76%)
 Frame = +2

Query: 86  EMVRPYSVKGRKRKRRDESYKVEKRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXANELPG 265
           EMVRPY++KG KRKRR+E+Y  E+                               +ELPG
Sbjct: 48  EMVRPYTIKGHKRKRREENYDKEE-------VKQLLEEETAATATQDENKAEEITHELPG 100

Query: 266 IPIEPSDQKSKTGVIFVLERASLEVAKVGKSYQLLNSDDHSNFLRKHNKNPGDYRPDIAH 445
           IP+ P    +KTGV F+LERA LEVAKVGKSYQLL+S+DH+NFLRK+NKNP DYRPDI H
Sbjct: 101 IPLVPFKSNNKTGVTFILERACLEVAKVGKSYQLLSSEDHANFLRKNNKNPADYRPDILH 160

Query: 446 QALLAILDSPLNKAGRLRALYVRTEKGVLFEVKPHVRMPRTFKRFCGVILQLLQKLSISA 625
           QALL ILDSPLNKAGRLRA+YVRTEKGVLFEVKPHVR+PRT+KRF G++LQLLQKLSI+A
Sbjct: 161 QALLTILDSPLNKAGRLRAVYVRTEKGVLFEVKPHVRIPRTYKRFSGIMLQLLQKLSITA 220

Query: 626 TSKREKLLRIIKNPVTQHLPVNSRKIGLSYSSPKLVKLQDYVAAASEDVNLVFVVGAMAH 805
             KREKLLR+IKNPVTQ+LPVNSRKIG SYSS K   ++DYVAA S+DV+LVFVVGAMAH
Sbjct: 221 VGKREKLLRVIKNPVTQYLPVNSRKIGFSYSSEKSTPIRDYVAAVSDDVDLVFVVGAMAH 280

Query: 806 GKIDKEYADDFISVSGYPLSAACCISRICNTLEQKWTI 919
           GKI  +Y DDFI++SGYPLSA+ C   IC  L QKW I
Sbjct: 281 GKISNDYTDDFIAISGYPLSASWCTYLICGALMQKWNI 318


>ref|XP_002273311.1| PREDICTED: ribosomal RNA small subunit methyltransferase nep-1
           [Vitis vinifera]
          Length = 271

 Score =  363 bits (932), Expect = 5e-98
 Identities = 184/277 (66%), Positives = 213/277 (76%)
 Frame = +2

Query: 89  MVRPYSVKGRKRKRRDESYKVEKRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXANELPGI 268
           MVRPY++KG KRKRR+E+Y  E+                               +ELPGI
Sbjct: 1   MVRPYTIKGHKRKRREENYDKEE-------VKQLLEEETAATATQDENKAEEITHELPGI 53

Query: 269 PIEPSDQKSKTGVIFVLERASLEVAKVGKSYQLLNSDDHSNFLRKHNKNPGDYRPDIAHQ 448
           P+ P    +KTGV F+LERA LEVAKVGKSYQLL+S+DH+NFLRK+NKNP DYRPDI HQ
Sbjct: 54  PLVPFKSNNKTGVTFILERACLEVAKVGKSYQLLSSEDHANFLRKNNKNPADYRPDILHQ 113

Query: 449 ALLAILDSPLNKAGRLRALYVRTEKGVLFEVKPHVRMPRTFKRFCGVILQLLQKLSISAT 628
           ALL ILDSPLNKAGRLRA+YVRTEKGVLFEVKPHVR+PRT+KRF G++LQLLQKLSI+A 
Sbjct: 114 ALLTILDSPLNKAGRLRAVYVRTEKGVLFEVKPHVRIPRTYKRFSGIMLQLLQKLSITAV 173

Query: 629 SKREKLLRIIKNPVTQHLPVNSRKIGLSYSSPKLVKLQDYVAAASEDVNLVFVVGAMAHG 808
            KREKLLR+IKNPVTQ+LPVNSRKIG SYSS K   ++DYVAA S+DV+LVFVVGAMAHG
Sbjct: 174 GKREKLLRVIKNPVTQYLPVNSRKIGFSYSSEKSTPIRDYVAAVSDDVDLVFVVGAMAHG 233

Query: 809 KIDKEYADDFISVSGYPLSAACCISRICNTLEQKWTI 919
           KI  +Y DDFI++SGYPLSA+ C   IC  L QKW I
Sbjct: 234 KISNDYTDDFIAISGYPLSASWCTYLICGALMQKWNI 270


>ref|XP_002275293.1| PREDICTED: ribosomal RNA small subunit methyltransferase nep-1
           [Vitis vinifera] gi|296085405|emb|CBI29137.3| unnamed
           protein product [Vitis vinifera]
          Length = 271

 Score =  363 bits (932), Expect = 5e-98
 Identities = 184/277 (66%), Positives = 215/277 (77%)
 Frame = +2

Query: 89  MVRPYSVKGRKRKRRDESYKVEKRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXANELPGI 268
           MVRPY++KG KRK+R+E+Y  E+                                ELPGI
Sbjct: 1   MVRPYAIKGHKRKKREENYDREE-------VEQLLEEETAATATQDEKKAEEVTLELPGI 53

Query: 269 PIEPSDQKSKTGVIFVLERASLEVAKVGKSYQLLNSDDHSNFLRKHNKNPGDYRPDIAHQ 448
           P+ PS+  +KTGV F+LERA LEVAKVGKSYQLL+S+DH+NFLRK+NKNP +YRPDI HQ
Sbjct: 54  PLVPSNLNNKTGVTFILERACLEVAKVGKSYQLLSSEDHANFLRKNNKNPAEYRPDILHQ 113

Query: 449 ALLAILDSPLNKAGRLRALYVRTEKGVLFEVKPHVRMPRTFKRFCGVILQLLQKLSISAT 628
           ALL ILDSPLNKAGRLRA+YVRTEKGVLFEVKPHVR+PRT+KRF G++LQLLQKLSI+A 
Sbjct: 114 ALLTILDSPLNKAGRLRAVYVRTEKGVLFEVKPHVRIPRTYKRFSGIMLQLLQKLSITAV 173

Query: 629 SKREKLLRIIKNPVTQHLPVNSRKIGLSYSSPKLVKLQDYVAAASEDVNLVFVVGAMAHG 808
            KREKLLR+IKNPVTQ+LPVNSRKIG SYSS K + ++DYVAA S+DV+LVFVVGAMAHG
Sbjct: 174 GKREKLLRVIKNPVTQYLPVNSRKIGFSYSSEKSIPMRDYVAAVSDDVDLVFVVGAMAHG 233

Query: 809 KIDKEYADDFISVSGYPLSAACCISRICNTLEQKWTI 919
           KI  +Y DDFI++SGYPLSAA C   IC  L QKW I
Sbjct: 234 KISNDYTDDFIAISGYPLSAAWCTYLICGALMQKWNI 270


>ref|XP_002531546.1| Nucleolar essential protein, putative [Ricinus communis]
           gi|223528837|gb|EEF30840.1| Nucleolar essential protein,
           putative [Ricinus communis]
          Length = 294

 Score =  357 bits (915), Expect = 4e-96
 Identities = 186/294 (63%), Positives = 222/294 (75%), Gaps = 16/294 (5%)
 Frame = +2

Query: 89  MVRPYSVKGRKRKRRDESY-----KVEKRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXAN 253
           MVRPY +KG KRK+R+E Y     +V+++                              +
Sbjct: 1   MVRPYGIKGPKRKKREEKYDKVGDEVDEQTEESAKRAMLSKTEMPLENCSKKTEQEEEGD 60

Query: 254 E----------LPGIPIEPSDQKSKT-GVIFVLERASLEVAKVGKSYQLLNSDDHSNFLR 400
           E          + GIPI PSD K+K  GVIFVLE+ASLEVAKVGK+YQ+LNSDDH+NFLR
Sbjct: 61  EGEELEGEVQEMEGIPIMPSDSKTKKPGVIFVLEKASLEVAKVGKTYQILNSDDHANFLR 120

Query: 401 KHNKNPGDYRPDIAHQALLAILDSPLNKAGRLRALYVRTEKGVLFEVKPHVRMPRTFKRF 580
           K+NKNP DYRPDI +QALL+ILDSPLNKAGRL+A+YV+TEKGVLFEVKP+VR+PRT+KRF
Sbjct: 121 KNNKNPADYRPDIVYQALLSILDSPLNKAGRLQAVYVKTEKGVLFEVKPYVRIPRTYKRF 180

Query: 581 CGVILQLLQKLSISATSKREKLLRIIKNPVTQHLPVNSRKIGLSYSSPKLVKLQDYVAAA 760
            G++LQLLQKLSI+A  KREKLLR+IKNPVTQ+LPVNSRKIG SYSS KLVK+ +YVAA 
Sbjct: 181 TGIMLQLLQKLSITAAGKREKLLRVIKNPVTQYLPVNSRKIGFSYSSDKLVKMSNYVAAV 240

Query: 761 SEDVNLVFVVGAMAHGKIDKEYADDFISVSGYPLSAACCISRICNTLEQKWTIV 922
            +DV LVFVVGAMAHGKID +Y DDFI++SGYPLSAA CISRIC  L  KW ++
Sbjct: 241 DDDVGLVFVVGAMAHGKIDCDYIDDFIAISGYPLSAAWCISRICEALADKWGVL 294


>gb|AFK49467.1| unknown [Lotus japonicus]
          Length = 272

 Score =  355 bits (911), Expect = 1e-95
 Identities = 183/279 (65%), Positives = 214/279 (76%), Gaps = 1/279 (0%)
 Frame = +2

Query: 89  MVRPYSVKGRKRKRRDESYKVEKRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXANELPGI 268
           M RP+ +KGRKRK ++  Y  E+                               +EL GI
Sbjct: 1   MTRPFGMKGRKRKDKEAKYDREE-------DEDEQVQPKRPMLQNAEVAAANEEDELVGI 53

Query: 269 PIEPSDQKSKT-GVIFVLERASLEVAKVGKSYQLLNSDDHSNFLRKHNKNPGDYRPDIAH 445
           PI PSD KS    VIF+LERASLEVAKVGK+YQLLNSDDH+NFLRK+NKNPGDYRPDI H
Sbjct: 54  PIMPSDHKSDNPNVIFILERASLEVAKVGKTYQLLNSDDHANFLRKNNKNPGDYRPDITH 113

Query: 446 QALLAILDSPLNKAGRLRALYVRTEKGVLFEVKPHVRMPRTFKRFCGVILQLLQKLSISA 625
           QALL+ILDSPLNKAGRL+A+Y++TEKGVL EVKP+VR+PRTFKRF GV+LQLLQKLSISA
Sbjct: 114 QALLSILDSPLNKAGRLQAVYIKTEKGVLIEVKPYVRIPRTFKRFSGVMLQLLQKLSISA 173

Query: 626 TSKREKLLRIIKNPVTQHLPVNSRKIGLSYSSPKLVKLQDYVAAASEDVNLVFVVGAMAH 805
             K EKLLR IKNPVTQ+LPVNSRKIGLS+SS KLV + DYV+    D+NLVFVVGAMAH
Sbjct: 174 AGKHEKLLRTIKNPVTQYLPVNSRKIGLSFSSEKLVNMNDYVSTVPSDMNLVFVVGAMAH 233

Query: 806 GKIDKEYADDFISVSGYPLSAACCISRICNTLEQKWTIV 922
           GK++ +Y +D+I+VSGYPLSAA CI+RICN LE KW I+
Sbjct: 234 GKVETDYTEDYIAVSGYPLSAAYCITRICNALEAKWKIL 272