BLASTX nr result
ID: Cimicifuga21_contig00000833
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00000833
(1580 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001058481.1| Os06g0701100 [Oryza sativa Japonica Group] g... 657 0.0
ref|XP_002281247.2| PREDICTED: eukaryotic initiation factor 4A-1... 657 0.0
emb|CBI27885.3| unnamed protein product [Vitis vinifera] 657 0.0
gb|ADB07168.1| DEAD-box RNA helicase-like protein [Prunus persic... 655 0.0
gb|AAN74635.1| DEAD box RNA helicase [Pisum sativum] gi|40950574... 654 0.0
>ref|NP_001058481.1| Os06g0701100 [Oryza sativa Japonica Group]
gi|97536398|sp|P35683.2|IF4A1_ORYSJ RecName:
Full=Eukaryotic initiation factor 4A-1; Short=eIF-4A-1;
AltName: Full=ATP-dependent RNA helicase eIF4A-1;
AltName: Full=DEAD-box ATP-dependent RNA helicase 4
gi|53791892|dbj|BAD54014.1| eukaryotic initiation factor
4A [Oryza sativa Japonica Group]
gi|53792733|dbj|BAD53769.1| eukaryotic initiation factor
4A [Oryza sativa Japonica Group]
gi|113596521|dbj|BAF20395.1| Os06g0701100 [Oryza sativa
Japonica Group] gi|125598400|gb|EAZ38180.1| hypothetical
protein OsJ_22532 [Oryza sativa Japonica Group]
gi|215712230|dbj|BAG94357.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215740601|dbj|BAG97257.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215767366|dbj|BAG99594.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 414
Score = 657 bits (1695), Expect = 0.0
Identities = 338/374 (90%), Positives = 345/374 (92%)
Frame = +3
Query: 3 KPSAIQQRGIVPFCQGLDVIQQAQSGTGKTATFCSGILQQLDYGVXXXXXXXXXXXXXXX 182
KPSAIQQRGIVPFC+GLDVIQQAQSGTGKTATFCSGILQQLDY V
Sbjct: 63 KPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYAVVECQA---------- 112
Query: 183 XXXXXXXXXXXXLVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSNGV 362
LVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRIL++GV
Sbjct: 113 ------------LVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILASGV 160
Query: 363 HVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKVQVGVF 542
HVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPSK+QVGVF
Sbjct: 161 HVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKIQVGVF 220
Query: 543 SATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAI 722
SATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKL+TLCDLYETLAI
Sbjct: 221 SATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLDTLCDLYETLAI 280
Query: 723 TQSVIFVNTRRKVDWLTDKMRGRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLL 902
TQSVIFVNTRRKVDWLTDKMRGRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLL
Sbjct: 281 TQSVIFVNTRRKVDWLTDKMRGRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLL 340
Query: 903 ARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLQDIQRFYN 1082
ARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERML DIQRFYN
Sbjct: 341 ARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQRFYN 400
Query: 1083 VLIEELPSNVADLL 1124
V+IEELP+NVADLL
Sbjct: 401 VVIEELPANVADLL 414
>ref|XP_002281247.2| PREDICTED: eukaryotic initiation factor 4A-15-like [Vitis vinifera]
Length = 803
Score = 657 bits (1695), Expect = 0.0
Identities = 339/374 (90%), Positives = 345/374 (92%)
Frame = +3
Query: 3 KPSAIQQRGIVPFCQGLDVIQQAQSGTGKTATFCSGILQQLDYGVXXXXXXXXXXXXXXX 182
KPSAIQQRGIVPFC+GLDVIQQAQSGTGKTATFCSGILQQLDYG+
Sbjct: 452 KPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQA---------- 501
Query: 183 XXXXXXXXXXXXLVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSNGV 362
LVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILS+GV
Sbjct: 502 ------------LVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGV 549
Query: 363 HVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKVQVGVF 542
HVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKVQVGVF
Sbjct: 550 HVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKVQVGVF 609
Query: 543 SATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAI 722
SATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNV+KEEWKLETLCDLYETLAI
Sbjct: 610 SATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVDKEEWKLETLCDLYETLAI 669
Query: 723 TQSVIFVNTRRKVDWLTDKMRGRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLL 902
TQSVIFVNTRRKVDWLTDKMR RDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLL
Sbjct: 670 TQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLL 729
Query: 903 ARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLQDIQRFYN 1082
ARGIDVQQVSLVIN+DLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERML DIQRFYN
Sbjct: 730 ARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQRFYN 789
Query: 1083 VLIEELPSNVADLL 1124
V+IEELPSNVADLL
Sbjct: 790 VVIEELPSNVADLL 803
>emb|CBI27885.3| unnamed protein product [Vitis vinifera]
Length = 413
Score = 657 bits (1695), Expect = 0.0
Identities = 339/374 (90%), Positives = 345/374 (92%)
Frame = +3
Query: 3 KPSAIQQRGIVPFCQGLDVIQQAQSGTGKTATFCSGILQQLDYGVXXXXXXXXXXXXXXX 182
KPSAIQQRGIVPFC+GLDVIQQAQSGTGKTATFCSGILQQLDYG+
Sbjct: 62 KPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQA---------- 111
Query: 183 XXXXXXXXXXXXLVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSNGV 362
LVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILS+GV
Sbjct: 112 ------------LVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGV 159
Query: 363 HVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKVQVGVF 542
HVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKVQVGVF
Sbjct: 160 HVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKVQVGVF 219
Query: 543 SATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAI 722
SATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNV+KEEWKLETLCDLYETLAI
Sbjct: 220 SATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVDKEEWKLETLCDLYETLAI 279
Query: 723 TQSVIFVNTRRKVDWLTDKMRGRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLL 902
TQSVIFVNTRRKVDWLTDKMR RDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLL
Sbjct: 280 TQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLL 339
Query: 903 ARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLQDIQRFYN 1082
ARGIDVQQVSLVIN+DLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERML DIQRFYN
Sbjct: 340 ARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQRFYN 399
Query: 1083 VLIEELPSNVADLL 1124
V+IEELPSNVADLL
Sbjct: 400 VVIEELPSNVADLL 413
>gb|ADB07168.1| DEAD-box RNA helicase-like protein [Prunus persica]
gi|283049402|gb|ADB07169.1| DEAD-box RNA helicase-like
protein [Prunus persica]
Length = 413
Score = 655 bits (1691), Expect = 0.0
Identities = 339/374 (90%), Positives = 342/374 (91%)
Frame = +3
Query: 3 KPSAIQQRGIVPFCQGLDVIQQAQSGTGKTATFCSGILQQLDYGVXXXXXXXXXXXXXXX 182
KPSAIQQRGIVPFC+GLDVIQQAQSGTGKTATFCSGILQQLDY V
Sbjct: 62 KPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYAVVQCQA---------- 111
Query: 183 XXXXXXXXXXXXLVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSNGV 362
LVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRIL GV
Sbjct: 112 ------------LVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGV 159
Query: 363 HVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKVQVGVF 542
HVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKVQVGVF
Sbjct: 160 HVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKVQVGVF 219
Query: 543 SATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAI 722
SATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNV+KEEWKLETLCDLYETLAI
Sbjct: 220 SATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVDKEEWKLETLCDLYETLAI 279
Query: 723 TQSVIFVNTRRKVDWLTDKMRGRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLL 902
TQSVIFVNTRRKVDWLTDKMR RDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLL
Sbjct: 280 TQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLL 339
Query: 903 ARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLQDIQRFYN 1082
ARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERML DIQRFYN
Sbjct: 340 ARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLYDIQRFYN 399
Query: 1083 VLIEELPSNVADLL 1124
V+IEELPSNVADLL
Sbjct: 400 VVIEELPSNVADLL 413
>gb|AAN74635.1| DEAD box RNA helicase [Pisum sativum] gi|40950574|gb|AAR97917.1| DEAD
box RNA helicase [Pisum sativum]
Length = 413
Score = 654 bits (1686), Expect = 0.0
Identities = 336/374 (89%), Positives = 344/374 (91%)
Frame = +3
Query: 3 KPSAIQQRGIVPFCQGLDVIQQAQSGTGKTATFCSGILQQLDYGVXXXXXXXXXXXXXXX 182
KPSAIQQRGIVPFC+GLDVIQQAQSGTGKTATFCSGILQQLDY V
Sbjct: 62 KPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYSVTECQA---------- 111
Query: 183 XXXXXXXXXXXXLVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSNGV 362
LVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILS+GV
Sbjct: 112 ------------LVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGV 159
Query: 363 HVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKVQVGVF 542
HVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPSK+QVGVF
Sbjct: 160 HVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKIQVGVF 219
Query: 543 SATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAI 722
SATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNV+KEEWKL+TLCDLYETLAI
Sbjct: 220 SATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVDKEEWKLDTLCDLYETLAI 279
Query: 723 TQSVIFVNTRRKVDWLTDKMRGRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLL 902
TQSVIFVNTRRKVDWLTDKMR RDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLL
Sbjct: 280 TQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLL 339
Query: 903 ARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLQDIQRFYN 1082
ARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVT+DDERML DIQ+FYN
Sbjct: 340 ARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTKDDERMLGDIQKFYN 399
Query: 1083 VLIEELPSNVADLL 1124
VLIEELPSNVA+LL
Sbjct: 400 VLIEELPSNVAELL 413