BLASTX nr result

ID: Cimicifuga21_contig00000812 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00000812
         (655 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322584.1| predicted protein [Populus trichocarpa] gi|2...    87   2e-15
ref|XP_002307940.1| predicted protein [Populus trichocarpa] gi|2...    87   2e-15
emb|CBX25413.1| hypothetical_protein [Oryza glaberrima]                87   4e-15
emb|CBX25410.1| hypothetical_protein [Oryza glaberrima]                87   4e-15
ref|XP_004165341.1| PREDICTED: LOW QUALITY PROTEIN: alpha-L-arab...    86   5e-15

>ref|XP_002322584.1| predicted protein [Populus trichocarpa] gi|222867214|gb|EEF04345.1|
           predicted protein [Populus trichocarpa]
          Length = 667

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 39/46 (84%), Positives = 40/46 (86%)
 Frame = -3

Query: 653 FVEGEWLRNAFC*RESIGPWE*RLVHFCDVWMYWTDDGLGYFEFLQ 516
           FVEGEWLRNAF  +ESIGPWE R  HF DVWMYWTDDGLGYFEFLQ
Sbjct: 268 FVEGEWLRNAFRWKESIGPWEERPGHFGDVWMYWTDDGLGYFEFLQ 313



 Score = 43.1 bits (100), Expect(2) = 1e-06
 Identities = 18/25 (72%), Positives = 22/25 (88%)
 Frame = -2

Query: 513 NYLKFYDALKDAYPDIRIISNVTGS 439
           NYLKFY+A++ AYPDI+IISN  GS
Sbjct: 396 NYLKFYNAIRSAYPDIKIISNCDGS 420



 Score = 34.7 bits (78), Expect(2) = 1e-06
 Identities = 18/35 (51%), Positives = 23/35 (65%), Gaps = 5/35 (14%)
 Frame = -3

Query: 437 LDHPA-----YMFTHANNLFSMARQFDHTSCGGPK 348
           LDHPA     +++T A+NLFSM  +FD TS   PK
Sbjct: 424 LDHPADYYDYHVYTSASNLFSMTHKFDCTSRSCPK 458


>ref|XP_002307940.1| predicted protein [Populus trichocarpa] gi|222853916|gb|EEE91463.1|
           predicted protein [Populus trichocarpa]
          Length = 670

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 39/46 (84%), Positives = 40/46 (86%)
 Frame = -3

Query: 653 FVEGEWLRNAFC*RESIGPWE*RLVHFCDVWMYWTDDGLGYFEFLQ 516
           FVEGEWLRNAF  +ESIGPWE R  HF DVWMYWTDDGLGYFEFLQ
Sbjct: 264 FVEGEWLRNAFRWKESIGPWEERPGHFGDVWMYWTDDGLGYFEFLQ 309



 Score = 46.2 bits (108), Expect(2) = 1e-09
 Identities = 20/25 (80%), Positives = 22/25 (88%)
 Frame = -2

Query: 513 NYLKFYDALKDAYPDIRIISNVTGS 439
           NYLKFYDA+K AYPDI+IISN  GS
Sbjct: 392 NYLKFYDAIKSAYPDIKIISNCDGS 416



 Score = 42.0 bits (97), Expect(2) = 1e-09
 Identities = 20/35 (57%), Positives = 25/35 (71%), Gaps = 5/35 (14%)
 Frame = -3

Query: 437 LDHPA-----YMFTHANNLFSMARQFDHTSCGGPK 348
           LDHPA     +++T A++LFSM  QFDHTS  GPK
Sbjct: 420 LDHPADYYDFHIYTSASHLFSMTHQFDHTSRSGPK 454


>emb|CBX25413.1| hypothetical_protein [Oryza glaberrima]
          Length = 677

 Score = 86.7 bits (213), Expect = 4e-15
 Identities = 38/49 (77%), Positives = 42/49 (85%)
 Frame = -3

Query: 653 FVEGEWLRNAFC*RESIGPWE*RLVHFCDVWMYWTDDGLGYFEFLQGIT 507
           FVEG+WLRNAF  RE+IGPWE R  HF DVW YWTDDGLGY+EFLQGI+
Sbjct: 291 FVEGDWLRNAFRWRETIGPWEQRPGHFGDVWNYWTDDGLGYYEFLQGIS 339



 Score = 43.1 bits (100), Expect(2) = 1e-06
 Identities = 18/25 (72%), Positives = 22/25 (88%)
 Frame = -2

Query: 513 NYLKFYDALKDAYPDIRIISNVTGS 439
           NYLKFYDA++ AYPDI++ISN  GS
Sbjct: 404 NYLKFYDAIRKAYPDIQMISNCDGS 428



 Score = 34.7 bits (78), Expect(2) = 1e-06
 Identities = 21/40 (52%), Positives = 25/40 (62%), Gaps = 5/40 (12%)
 Frame = -3

Query: 437 LDHPA-----YMFTHANNLFSMARQFDHTSCGGPKGHEVF 333
           LDHPA     +++T A NLF M  +FD TS  GPK  EVF
Sbjct: 432 LDHPADLYDFHVYTSAANLFIMKNKFDRTSRIGPK--EVF 469


>emb|CBX25410.1| hypothetical_protein [Oryza glaberrima]
          Length = 624

 Score = 86.7 bits (213), Expect = 4e-15
 Identities = 39/51 (76%), Positives = 41/51 (80%)
 Frame = -3

Query: 653 FVEGEWLRNAFC*RESIGPWE*RLVHFCDVWMYWTDDGLGYFEFLQGITSS 501
           FVEGEWLRNAF  RESIGPWE R  HF DVW YWTDDGLGY+EFLQ +  S
Sbjct: 263 FVEGEWLRNAFRWRESIGPWEERPGHFGDVWHYWTDDGLGYYEFLQDVLDS 313


>ref|XP_004165341.1| PREDICTED: LOW QUALITY PROTEIN: alpha-L-arabinofuranosidase 1-like
           [Cucumis sativus]
          Length = 676

 Score = 86.3 bits (212), Expect = 5e-15
 Identities = 38/46 (82%), Positives = 40/46 (86%)
 Frame = -3

Query: 653 FVEGEWLRNAFC*RESIGPWE*RLVHFCDVWMYWTDDGLGYFEFLQ 516
           FVEGEWLRNAF  +E+IGPWE R  HF DVWMYWTDDGLGYFEFLQ
Sbjct: 268 FVEGEWLRNAFRWKETIGPWEQRPGHFGDVWMYWTDDGLGYFEFLQ 313



 Score = 41.2 bits (95), Expect(2) = 5e-07
 Identities = 20/37 (54%), Positives = 26/37 (70%), Gaps = 5/37 (13%)
 Frame = -3

Query: 443 VQLDHPA-----YMFTHANNLFSMARQFDHTSCGGPK 348
           V+LDHPA     +++T AN +FSMA +FD TS  GPK
Sbjct: 422 VKLDHPADYYDFHIYTSANQMFSMAHKFDKTSRSGPK 458



 Score = 38.1 bits (87), Expect(2) = 5e-07
 Identities = 16/25 (64%), Positives = 19/25 (76%)
 Frame = -2

Query: 513 NYLKFYDALKDAYPDIRIISNVTGS 439
           NY+K Y+A+K  YPDI IISN  GS
Sbjct: 396 NYIKIYNAIKRVYPDIEIISNCDGS 420


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