BLASTX nr result

ID: Cimicifuga21_contig00000783 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00000783
         (1803 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285514.1| PREDICTED: protein transport protein Sec61 s...   919   0.0  
ref|XP_002316850.1| Sec61 transport protein [Populus trichocarpa...   916   0.0  
ref|XP_002331716.1| Sec61 transport protein [Populus trichocarpa...   915   0.0  
ref|XP_003540494.1| PREDICTED: protein transport protein Sec61 s...   909   0.0  
ref|XP_002522260.1| preprotein translocase secy subunit, putativ...   909   0.0  

>ref|XP_002285514.1| PREDICTED: protein transport protein Sec61 subunit alpha [Vitis
            vinifera]
          Length = 476

 Score =  919 bits (2376), Expect = 0.0
 Identities = 467/475 (98%), Positives = 475/475 (100%)
 Frame = +3

Query: 114  MGGGFRVLHLVRPFLSFLPEVQSADRKVPFREKVIYTVISLFIFLVCSQLPLYGIHSTTG 293
            MGGGFRVLHLVRPFLSFLPEVQSADRKVPFREKVIYTVISLFIFLVCSQLPLYGIHSTTG
Sbjct: 1    MGGGFRVLHLVRPFLSFLPEVQSADRKVPFREKVIYTVISLFIFLVCSQLPLYGIHSTTG 60

Query: 294  ADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNSVREDRALLNGAQK 473
            ADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDN+VREDRALLNGAQK
Sbjct: 61   ADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQK 120

Query: 474  LLGILIAVGEAVAYVLSGMYGSVNQLGVGNAILIIVQLCFAGIIVICLDELLQKGYGLGS 653
            LLGILIAVGEAVAYVLSGMYGSV+QLGVGNAILIIVQLCFAGIIVICLDELLQKGYGLGS
Sbjct: 121  LLGILIAVGEAVAYVLSGMYGSVSQLGVGNAILIIVQLCFAGIIVICLDELLQKGYGLGS 180

Query: 654  GISLFIATNICESIIWKAFSPTTINSGRGAEFEGAVIALFHLLITRTDKVRALREAFYRQ 833
            GISLFIATNICE+IIWKAFSPTTINSGRGAEFEGAVIALFHLLITRTDKVRALREAFYRQ
Sbjct: 181  GISLFIATNICENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITRTDKVRALREAFYRQ 240

Query: 834  NLPNVTNLLATVLIFLIVIYFQGFRVVLPVRSKNARGQQGSYPIKLFYTSNMPIILQSAL 1013
            NLPNVTNLLATVLIFLIVIYFQGFRVVLPVRSKNARGQQGSYPIKLFYTSNMPIILQSAL
Sbjct: 241  NLPNVTNLLATVLIFLIVIYFQGFRVVLPVRSKNARGQQGSYPIKLFYTSNMPIILQSAL 300

Query: 1014 VSNLYFISQLLYRRYSGNFLVNLLGKWKESEYSGGQFIPVGGIAYYITAPSSLADMAANP 1193
            VSNLYFISQLLYRRYSGNFLVNLLGKWKESEYSGGQ+IPVGG+AYYITAPSSLADMAANP
Sbjct: 301  VSNLYFISQLLYRRYSGNFLVNLLGKWKESEYSGGQYIPVGGLAYYITAPSSLADMAANP 360

Query: 1194 FHALFYLVFMLSACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRESNLQKELNRYIP 1373
            FHALFYL+FML+ACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRE+NLQKELNRYIP
Sbjct: 361  FHALFYLIFMLAACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHREANLQKELNRYIP 420

Query: 1374 TAAAFGGMCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFG 1538
            TAAAFGGMCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFG
Sbjct: 421  TAAAFGGMCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFG 475


>ref|XP_002316850.1| Sec61 transport protein [Populus trichocarpa]
            gi|118487035|gb|ABK95348.1| unknown [Populus trichocarpa]
            gi|222859915|gb|EEE97462.1| Sec61 transport protein
            [Populus trichocarpa]
          Length = 476

 Score =  916 bits (2368), Expect = 0.0
 Identities = 464/475 (97%), Positives = 473/475 (99%)
 Frame = +3

Query: 114  MGGGFRVLHLVRPFLSFLPEVQSADRKVPFREKVIYTVISLFIFLVCSQLPLYGIHSTTG 293
            MGGGFRVLHLVRPFLSFLPEVQSADRK+PFREKVIYTVI+LFIFLVCSQLPLYGIHSTTG
Sbjct: 1    MGGGFRVLHLVRPFLSFLPEVQSADRKIPFREKVIYTVIALFIFLVCSQLPLYGIHSTTG 60

Query: 294  ADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNSVREDRALLNGAQK 473
            ADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDN+VREDRALLNGAQK
Sbjct: 61   ADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQK 120

Query: 474  LLGILIAVGEAVAYVLSGMYGSVNQLGVGNAILIIVQLCFAGIIVICLDELLQKGYGLGS 653
            LLGILIAVGEAVAYVLSGMYGSV QLGVGNAILII+QLCFAGIIVICLDELLQKGYGLGS
Sbjct: 121  LLGILIAVGEAVAYVLSGMYGSVGQLGVGNAILIIIQLCFAGIIVICLDELLQKGYGLGS 180

Query: 654  GISLFIATNICESIIWKAFSPTTINSGRGAEFEGAVIALFHLLITRTDKVRALREAFYRQ 833
            GISLFIATNICE+IIWKAFSPTTINSGRGAEFEGAVIALFHLLITRTDKVRALREAFYRQ
Sbjct: 181  GISLFIATNICENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITRTDKVRALREAFYRQ 240

Query: 834  NLPNVTNLLATVLIFLIVIYFQGFRVVLPVRSKNARGQQGSYPIKLFYTSNMPIILQSAL 1013
            NLPNVTNLLATVLIFLIVIYFQGFRVVLPVRSKNARGQQGSYPIKLFYTSNMPIILQSAL
Sbjct: 241  NLPNVTNLLATVLIFLIVIYFQGFRVVLPVRSKNARGQQGSYPIKLFYTSNMPIILQSAL 300

Query: 1014 VSNLYFISQLLYRRYSGNFLVNLLGKWKESEYSGGQFIPVGGIAYYITAPSSLADMAANP 1193
            VSNLYFISQLLYRRYSGNFLVNLLGKWKESEYSGGQF+PVGG+AYYITAPSSLADMAANP
Sbjct: 301  VSNLYFISQLLYRRYSGNFLVNLLGKWKESEYSGGQFVPVGGLAYYITAPSSLADMAANP 360

Query: 1194 FHALFYLVFMLSACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRESNLQKELNRYIP 1373
            FHALFY VFMLSACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRESNLQKELNRYIP
Sbjct: 361  FHALFYFVFMLSACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRESNLQKELNRYIP 420

Query: 1374 TAAAFGGMCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFG 1538
            TAAAFGG+CIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKE+ASELGFFG
Sbjct: 421  TAAAFGGICIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKEKASELGFFG 475


>ref|XP_002331716.1| Sec61 transport protein [Populus trichocarpa]
            gi|222874322|gb|EEF11453.1| Sec61 transport protein
            [Populus trichocarpa]
          Length = 476

 Score =  915 bits (2365), Expect = 0.0
 Identities = 463/475 (97%), Positives = 473/475 (99%)
 Frame = +3

Query: 114  MGGGFRVLHLVRPFLSFLPEVQSADRKVPFREKVIYTVISLFIFLVCSQLPLYGIHSTTG 293
            MGGGFRVLHLVRPFLSFLPEVQSADRK+PFREKVIYTVI+LFIFLVCSQLPLYGIHSTTG
Sbjct: 1    MGGGFRVLHLVRPFLSFLPEVQSADRKIPFREKVIYTVIALFIFLVCSQLPLYGIHSTTG 60

Query: 294  ADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNSVREDRALLNGAQK 473
            ADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDN+VREDRALLNGAQK
Sbjct: 61   ADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQK 120

Query: 474  LLGILIAVGEAVAYVLSGMYGSVNQLGVGNAILIIVQLCFAGIIVICLDELLQKGYGLGS 653
            LLGILIAVGEAVAYVLSGMYGSV QLGVGNAILII+QLCFAGIIVICLDELLQKGYGLGS
Sbjct: 121  LLGILIAVGEAVAYVLSGMYGSVGQLGVGNAILIIIQLCFAGIIVICLDELLQKGYGLGS 180

Query: 654  GISLFIATNICESIIWKAFSPTTINSGRGAEFEGAVIALFHLLITRTDKVRALREAFYRQ 833
            GISLFIATNICE+IIWKAFSPTTINSGRGAEFEGAVIALFHLLITRTDKVRALREAFYRQ
Sbjct: 181  GISLFIATNICENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITRTDKVRALREAFYRQ 240

Query: 834  NLPNVTNLLATVLIFLIVIYFQGFRVVLPVRSKNARGQQGSYPIKLFYTSNMPIILQSAL 1013
            NLPNVTNLLATVLIFLIVIYFQGFRVVLPVRSKNARGQQGSYPIKLFYTSNMPIILQSAL
Sbjct: 241  NLPNVTNLLATVLIFLIVIYFQGFRVVLPVRSKNARGQQGSYPIKLFYTSNMPIILQSAL 300

Query: 1014 VSNLYFISQLLYRRYSGNFLVNLLGKWKESEYSGGQFIPVGGIAYYITAPSSLADMAANP 1193
            VSNLYFISQLLYRRYSGNFLVNLLGKWKESEYSGGQF+PVGG+AYYITAPSSLADMAANP
Sbjct: 301  VSNLYFISQLLYRRYSGNFLVNLLGKWKESEYSGGQFVPVGGLAYYITAPSSLADMAANP 360

Query: 1194 FHALFYLVFMLSACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRESNLQKELNRYIP 1373
            FHALFY VFMLSACALFSKTWIEVSGSSA+DVAKQLKEQQMVMPGHRESNLQKELNRYIP
Sbjct: 361  FHALFYFVFMLSACALFSKTWIEVSGSSAKDVAKQLKEQQMVMPGHRESNLQKELNRYIP 420

Query: 1374 TAAAFGGMCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFG 1538
            TAAAFGG+CIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKE+ASELGFFG
Sbjct: 421  TAAAFGGICIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKEKASELGFFG 475


>ref|XP_003540494.1| PREDICTED: protein transport protein Sec61 subunit alpha-like
            [Glycine max]
          Length = 476

 Score =  909 bits (2349), Expect = 0.0
 Identities = 462/475 (97%), Positives = 471/475 (99%)
 Frame = +3

Query: 114  MGGGFRVLHLVRPFLSFLPEVQSADRKVPFREKVIYTVISLFIFLVCSQLPLYGIHSTTG 293
            MGGGFRVLHLVRPFLSFLPEVQ+ADRKVPFREKVIYTVISLFIFLVCSQLPLYGIHSTTG
Sbjct: 1    MGGGFRVLHLVRPFLSFLPEVQTADRKVPFREKVIYTVISLFIFLVCSQLPLYGIHSTTG 60

Query: 294  ADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNSVREDRALLNGAQK 473
            ADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDN+VREDRALLNGAQK
Sbjct: 61   ADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQK 120

Query: 474  LLGILIAVGEAVAYVLSGMYGSVNQLGVGNAILIIVQLCFAGIIVICLDELLQKGYGLGS 653
            LLGILIAVGEAVAYVLSGMYGSV QLGVGNAILII+QLCFAGIIVICLDELLQKGYGLGS
Sbjct: 121  LLGILIAVGEAVAYVLSGMYGSVGQLGVGNAILIIIQLCFAGIIVICLDELLQKGYGLGS 180

Query: 654  GISLFIATNICESIIWKAFSPTTINSGRGAEFEGAVIALFHLLITRTDKVRALREAFYRQ 833
            GISLFIATNICE+IIWKAFSPTTINSGRGAEFEGAVIALFHLLITRTDKVRALREAFYRQ
Sbjct: 181  GISLFIATNICENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITRTDKVRALREAFYRQ 240

Query: 834  NLPNVTNLLATVLIFLIVIYFQGFRVVLPVRSKNARGQQGSYPIKLFYTSNMPIILQSAL 1013
            NLPNVTNLLATVLIFLIVIYFQGFRVVLPVRSKNARGQQGSYPIKLFYTSNMPIILQSAL
Sbjct: 241  NLPNVTNLLATVLIFLIVIYFQGFRVVLPVRSKNARGQQGSYPIKLFYTSNMPIILQSAL 300

Query: 1014 VSNLYFISQLLYRRYSGNFLVNLLGKWKESEYSGGQFIPVGGIAYYITAPSSLADMAANP 1193
            VSNLYFISQLL+R+YSGNF V+LLGKWKESEY GGQ +PVGGIAYYITAPSSLADMAANP
Sbjct: 301  VSNLYFISQLLHRKYSGNFFVDLLGKWKESEYGGGQSVPVGGIAYYITAPSSLADMAANP 360

Query: 1194 FHALFYLVFMLSACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRESNLQKELNRYIP 1373
            FHALFYLVFMLSACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRESNLQKELNRYIP
Sbjct: 361  FHALFYLVFMLSACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRESNLQKELNRYIP 420

Query: 1374 TAAAFGGMCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFG 1538
            TAAAFGG+CIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFG
Sbjct: 421  TAAAFGGICIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFG 475


>ref|XP_002522260.1| preprotein translocase secy subunit, putative [Ricinus communis]
            gi|223538513|gb|EEF40118.1| preprotein translocase secy
            subunit, putative [Ricinus communis]
          Length = 476

 Score =  909 bits (2349), Expect = 0.0
 Identities = 459/475 (96%), Positives = 473/475 (99%)
 Frame = +3

Query: 114  MGGGFRVLHLVRPFLSFLPEVQSADRKVPFREKVIYTVISLFIFLVCSQLPLYGIHSTTG 293
            MGGGFRVLHLV+PFLS LPEVQ+ADRK+PFREKVIYTVISLFIFLVCSQLPLYGIHSTTG
Sbjct: 1    MGGGFRVLHLVKPFLSVLPEVQNADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTG 60

Query: 294  ADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNSVREDRALLNGAQK 473
            ADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDN+VREDRALLNGAQK
Sbjct: 61   ADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQK 120

Query: 474  LLGILIAVGEAVAYVLSGMYGSVNQLGVGNAILIIVQLCFAGIIVICLDELLQKGYGLGS 653
            LLGILIAVGEAVAYVLSGMYGSV+QLG GNAILII+QLCFAGIIVICLDELLQKGYGLGS
Sbjct: 121  LLGILIAVGEAVAYVLSGMYGSVSQLGAGNAILIIIQLCFAGIIVICLDELLQKGYGLGS 180

Query: 654  GISLFIATNICESIIWKAFSPTTINSGRGAEFEGAVIALFHLLITRTDKVRALREAFYRQ 833
            GISLFIATNICE+IIWKAFSPTTINSGRGAEFEGAVIALFHLLITR+DKVRALREAFYRQ
Sbjct: 181  GISLFIATNICENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITRSDKVRALREAFYRQ 240

Query: 834  NLPNVTNLLATVLIFLIVIYFQGFRVVLPVRSKNARGQQGSYPIKLFYTSNMPIILQSAL 1013
            NLPNVTNLLATVLIFLIVIYFQGFRVVLPVRSKNARGQQGSYPIKLFYTSNMPIILQSAL
Sbjct: 241  NLPNVTNLLATVLIFLIVIYFQGFRVVLPVRSKNARGQQGSYPIKLFYTSNMPIILQSAL 300

Query: 1014 VSNLYFISQLLYRRYSGNFLVNLLGKWKESEYSGGQFIPVGGIAYYITAPSSLADMAANP 1193
            VSNLYFISQLLYR+YSGNFLVNLLGKWKESEYSGGQFIPVGG+AYY+TAP+SLADMAANP
Sbjct: 301  VSNLYFISQLLYRKYSGNFLVNLLGKWKESEYSGGQFIPVGGLAYYVTAPASLADMAANP 360

Query: 1194 FHALFYLVFMLSACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRESNLQKELNRYIP 1373
            FHALFYLVFMLSACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHR+SNLQKELNRYIP
Sbjct: 361  FHALFYLVFMLSACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDSNLQKELNRYIP 420

Query: 1374 TAAAFGGMCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFG 1538
            TAAAFGG+CIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFG
Sbjct: 421  TAAAFGGICIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFG 475


Top