BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00000778
         (1471 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18223.3| unnamed protein product [Vitis vinifera]              678   0.0  
ref|XP_002265125.1| PREDICTED: 60S ribosomal protein L3-like [Vi...   678   0.0  
gb|AAQ96335.1| ribosomal protein L3A [Nicotiana tabacum]              677   0.0  
emb|CAN63848.1| hypothetical protein VITISV_039858 [Vitis vinifera]   676   0.0  
ref|NP_001233997.1| ribosomal protein L3 [Solanum lycopersicum] ...   676   0.0  

>emb|CBI18223.3| unnamed protein product [Vitis vinifera]
          Length = 449

 Score =  678 bits (1750), Expect = 0.0
 Identities = 335/389 (86%), Positives = 351/389 (90%), Gaps = 11/389 (2%)
 Frame = +1

Query: 118  RMSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPNKPCKLTAFLGYKAGMTHIVRD 297
            RMSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDP+KPC+LTAFLGYKAGMTHIVR+
Sbjct: 60   RMSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRE 119

Query: 298  VEKPGSKLHKKETCEAVTIVETPPMVIVGVVAYVKTPRGLRSLNTV-----------XXX 444
            VEKPGSKLHKKETCEAVTIVETPPMVIVGVVAYVKTPRGLRSLNTV              
Sbjct: 120  VEKPGSKLHKKETCEAVTIVETPPMVIVGVVAYVKTPRGLRSLNTVWAQHLSEEVKRRFY 179

Query: 445  XXXXXXXXXXXXXXXXXXXTDAGKKDIQSQLEKMKKYGTVIRVLAHTQIRKMKGLKQKKA 624
                               T+ GKK IQ+QLEKMKKY +VIRVLAHTQIRKMKGLKQKKA
Sbjct: 180  KNWCKSKKKAFTKYSKQYETEEGKKSIQAQLEKMKKYASVIRVLAHTQIRKMKGLKQKKA 239

Query: 625  HLMEIQVNGGTIAQKVDFAYGFFEKQVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 804
            HLMEIQVNGGTIAQKVD+AYGFFEKQVPVDA+FQKDEMIDIIGVTKGKGYEGVVTRWGVT
Sbjct: 240  HLMEIQVNGGTIAQKVDYAYGFFEKQVPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVT 299

Query: 805  RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKASQESHTAM 984
            RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKK+YKLGK  QESHTA+
Sbjct: 300  RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKIEQESHTAL 359

Query: 985  TEFDRTEKDITPIGGFPHYGVVKEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIK 1164
            TEFDRTEKDITP+GGFPHYGVVK+DY++IKGCCVGPKKRVVTLRQSLLKQTSR+ALEEIK
Sbjct: 360  TEFDRTEKDITPMGGFPHYGVVKDDYVMIKGCCVGPKKRVVTLRQSLLKQTSRVALEEIK 419

Query: 1165 LKFIDTSSKFGHGRFQTTQEKQKFYGRVK 1251
            LKFIDTSSKFGHGRFQTTQEKQKFYGR+K
Sbjct: 420  LKFIDTSSKFGHGRFQTTQEKQKFYGRMK 448


>ref|XP_002265125.1| PREDICTED: 60S ribosomal protein L3-like [Vitis vinifera]
          Length = 397

 Score =  678 bits (1750), Expect = 0.0
 Identities = 335/389 (86%), Positives = 351/389 (90%), Gaps = 11/389 (2%)
 Frame = +1

Query: 118  RMSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPNKPCKLTAFLGYKAGMTHIVRD 297
            RMSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDP+KPC+LTAFLGYKAGMTHIVR+
Sbjct: 8    RMSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRE 67

Query: 298  VEKPGSKLHKKETCEAVTIVETPPMVIVGVVAYVKTPRGLRSLNTV-----------XXX 444
            VEKPGSKLHKKETCEAVTIVETPPMVIVGVVAYVKTPRGLRSLNTV              
Sbjct: 68   VEKPGSKLHKKETCEAVTIVETPPMVIVGVVAYVKTPRGLRSLNTVWAQHLSEEVKRRFY 127

Query: 445  XXXXXXXXXXXXXXXXXXXTDAGKKDIQSQLEKMKKYGTVIRVLAHTQIRKMKGLKQKKA 624
                               T+ GKK IQ+QLEKMKKY +VIRVLAHTQIRKMKGLKQKKA
Sbjct: 128  KNWCKSKKKAFTKYSKQYETEEGKKSIQAQLEKMKKYASVIRVLAHTQIRKMKGLKQKKA 187

Query: 625  HLMEIQVNGGTIAQKVDFAYGFFEKQVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 804
            HLMEIQVNGGTIAQKVD+AYGFFEKQVPVDA+FQKDEMIDIIGVTKGKGYEGVVTRWGVT
Sbjct: 188  HLMEIQVNGGTIAQKVDYAYGFFEKQVPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVT 247

Query: 805  RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKASQESHTAM 984
            RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKK+YKLGK  QESHTA+
Sbjct: 248  RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKIEQESHTAL 307

Query: 985  TEFDRTEKDITPIGGFPHYGVVKEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIK 1164
            TEFDRTEKDITP+GGFPHYGVVK+DY++IKGCCVGPKKRVVTLRQSLLKQTSR+ALEEIK
Sbjct: 308  TEFDRTEKDITPMGGFPHYGVVKDDYVMIKGCCVGPKKRVVTLRQSLLKQTSRVALEEIK 367

Query: 1165 LKFIDTSSKFGHGRFQTTQEKQKFYGRVK 1251
            LKFIDTSSKFGHGRFQTTQEKQKFYGR+K
Sbjct: 368  LKFIDTSSKFGHGRFQTTQEKQKFYGRMK 396


>gb|AAQ96335.1| ribosomal protein L3A [Nicotiana tabacum]
          Length = 389

 Score =  677 bits (1746), Expect = 0.0
 Identities = 336/388 (86%), Positives = 347/388 (89%), Gaps = 11/388 (2%)
 Frame = +1

Query: 121  MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPNKPCKLTAFLGYKAGMTHIVRDV 300
            MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPNKPCKLTAFLGYKAGMTHIVRDV
Sbjct: 1    MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPNKPCKLTAFLGYKAGMTHIVRDV 60

Query: 301  EKPGSKLHKKETCEAVTIVETPPMVIVGVVAYVKTPRGLRSLNTVXXXXXXXXXXXXXXX 480
            EKPGSKLHKKETCEAVTI+ETPPMVIVGVV YVKTPRGLR LNTV               
Sbjct: 61   EKPGSKLHKKETCEAVTIIETPPMVIVGVVGYVKTPRGLRCLNTVWAQHLSEELKRRFYK 120

Query: 481  XXXXXXX-----------TDAGKKDIQSQLEKMKKYGTVIRVLAHTQIRKMKGLKQKKAH 627
                              +D GKKDIQ+QLEK+KKY  VIRVLAHTQIRKMKGLKQKKAH
Sbjct: 121  NWCKSKKKAFLKYSKKYESDEGKKDIQTQLEKLKKYACVIRVLAHTQIRKMKGLKQKKAH 180

Query: 628  LMEIQVNGGTIAQKVDFAYGFFEKQVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 807
            LMEIQVNGGTIAQKVDFAYGFFEKQVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181  LMEIQVNGGTIAQKVDFAYGFFEKQVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 808  LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKASQESHTAMT 987
            LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKKVYKLGKA QESH A+T
Sbjct: 241  LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKLGKAGQESHAAVT 300

Query: 988  EFDRTEKDITPIGGFPHYGVVKEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 1167
            +FDRTEKDITP+GGFPHYGVVK+DYLLIKGCCVGPKKRVVTLRQSLL QTSR+ALEEIKL
Sbjct: 301  DFDRTEKDITPMGGFPHYGVVKDDYLLIKGCCVGPKKRVVTLRQSLLNQTSRVALEEIKL 360

Query: 1168 KFIDTSSKFGHGRFQTTQEKQKFYGRVK 1251
            KFIDTSSKFGHGRFQTTQEKQKFYGR+K
Sbjct: 361  KFIDTSSKFGHGRFQTTQEKQKFYGRLK 388


>emb|CAN63848.1| hypothetical protein VITISV_039858 [Vitis vinifera]
          Length = 389

 Score =  676 bits (1745), Expect = 0.0
 Identities = 334/388 (86%), Positives = 350/388 (90%), Gaps = 11/388 (2%)
 Frame = +1

Query: 121  MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPNKPCKLTAFLGYKAGMTHIVRDV 300
            MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDP+KPC+LTAFLGYKAGMTHIVR+V
Sbjct: 1    MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVREV 60

Query: 301  EKPGSKLHKKETCEAVTIVETPPMVIVGVVAYVKTPRGLRSLNTV-----------XXXX 447
            EKPGSKLHKKETCEAVTIVETPPMVIVGVVAYVKTPRGLRSLNTV               
Sbjct: 61   EKPGSKLHKKETCEAVTIVETPPMVIVGVVAYVKTPRGLRSLNTVWAQHLSEEVKRRFYK 120

Query: 448  XXXXXXXXXXXXXXXXXXTDAGKKDIQSQLEKMKKYGTVIRVLAHTQIRKMKGLKQKKAH 627
                              T+ GKK IQ+QLEKMKKY +VIRVLAHTQIRKMKGLKQKKAH
Sbjct: 121  NWCKSKKKAFTKYSKQYETEEGKKSIQAQLEKMKKYASVIRVLAHTQIRKMKGLKQKKAH 180

Query: 628  LMEIQVNGGTIAQKVDFAYGFFEKQVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 807
            LMEIQVNGGTIAQKVD+AYGFFEKQVPVDA+FQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181  LMEIQVNGGTIAQKVDYAYGFFEKQVPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 808  LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKASQESHTAMT 987
            LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKK+YKLGK  QESHTA+T
Sbjct: 241  LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKIEQESHTALT 300

Query: 988  EFDRTEKDITPIGGFPHYGVVKEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 1167
            EFDRTEKDITP+GGFPHYGVVK+DY++IKGCCVGPKKRVVTLRQSLLKQTSR+ALEEIKL
Sbjct: 301  EFDRTEKDITPMGGFPHYGVVKDDYVMIKGCCVGPKKRVVTLRQSLLKQTSRVALEEIKL 360

Query: 1168 KFIDTSSKFGHGRFQTTQEKQKFYGRVK 1251
            KFIDTSSKFGHGRFQTTQEKQKFYGR+K
Sbjct: 361  KFIDTSSKFGHGRFQTTQEKQKFYGRMK 388


>ref|NP_001233997.1| ribosomal protein L3 [Solanum lycopersicum]
            gi|38327504|gb|AAR17783.1| ribosomal protein L3 [Solanum
            lycopersicum]
          Length = 389

 Score =  676 bits (1744), Expect = 0.0
 Identities = 338/388 (87%), Positives = 346/388 (89%), Gaps = 11/388 (2%)
 Frame = +1

Query: 121  MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPNKPCKLTAFLGYKAGMTHIVRDV 300
            MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDP+KPCKLTAFLGYKAGMTHIVR+V
Sbjct: 1    MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCKLTAFLGYKAGMTHIVREV 60

Query: 301  EKPGSKLHKKETCEAVTIVETPPMVIVGVVAYVKTPRGLRSLNTVXXXXXXXXXXXXXXX 480
            EKPGSKLHKKETCEAVTIVETPPMVIVGVV YVKTPRGLR LNTV               
Sbjct: 61   EKPGSKLHKKETCEAVTIVETPPMVIVGVVGYVKTPRGLRCLNTVWAQHLSEDIKRRFYK 120

Query: 481  XXXXXXX-----------TDAGKKDIQSQLEKMKKYGTVIRVLAHTQIRKMKGLKQKKAH 627
                              TD GKKDIQ+QLEK+KKY  VIRVLAHTQIRKMKGLKQKKAH
Sbjct: 121  NWCKSKKKAFLKYSKKYETDEGKKDIQAQLEKLKKYACVIRVLAHTQIRKMKGLKQKKAH 180

Query: 628  LMEIQVNGGTIAQKVDFAYGFFEKQVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 807
            LMEIQVNGG+IAQKVDFAYGFFEKQVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181  LMEIQVNGGSIAQKVDFAYGFFEKQVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 808  LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKASQESHTAMT 987
            LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGK  QESHTA+T
Sbjct: 241  LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKVGQESHTALT 300

Query: 988  EFDRTEKDITPIGGFPHYGVVKEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 1167
            EFDRTEKDITPIGGFPHYGVVKEDYLLIKGCCVG KKRVVTLRQSLL QTSR+ALEEIKL
Sbjct: 301  EFDRTEKDITPIGGFPHYGVVKEDYLLIKGCCVGTKKRVVTLRQSLLNQTSRVALEEIKL 360

Query: 1168 KFIDTSSKFGHGRFQTTQEKQKFYGRVK 1251
            KFIDTSSKFGHGRFQTTQEKQKFYGR+K
Sbjct: 361  KFIDTSSKFGHGRFQTTQEKQKFYGRLK 388