BLASTX nr result

ID: Cimicifuga21_contig00000742 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00000742
         (623 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275967.1| PREDICTED: uncharacterized protein LOC100258...    75   7e-12
ref|XP_002523315.1| conserved hypothetical protein [Ricinus comm...    74   2e-11
ref|XP_002301419.1| predicted protein [Populus trichocarpa] gi|2...    72   6e-11
ref|XP_003528786.1| PREDICTED: uncharacterized protein LOC100804...    70   3e-10
ref|XP_004145950.1| PREDICTED: uncharacterized protein LOC101207...    68   2e-09

>ref|XP_002275967.1| PREDICTED: uncharacterized protein LOC100258972 [Vitis vinifera]
          Length = 75

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 46/80 (57%), Positives = 52/80 (65%), Gaps = 4/80 (5%)
 Frame = -1

Query: 485 MENSSLISYEKLDRVANWLSTSVASAFFASLERCSCINLS----XXXXXXXXXAKDRPLM 318
           MENSS +SYEKL+ +A W+ TSVASAFFASLERCSCINLS             AKDRPLM
Sbjct: 1   MENSSFLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTADMDDDNDDGEEAKDRPLM 60

Query: 317 LTKPIEHDVFETNDVDKLPV 258
           LT     +    +DV  LPV
Sbjct: 61  LT-----NESPKSDVVNLPV 75


>ref|XP_002523315.1| conserved hypothetical protein [Ricinus communis]
           gi|223537403|gb|EEF39031.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 88

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 40/63 (63%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
 Frame = -1

Query: 479 NSSLISYEKLDRVANWLSTSVASAFFASLERCSCINL-SXXXXXXXXXAKDRPLMLTKPI 303
           N SLIS +KLDRVA+W+ ++VASAFFASLERCSCINL +         AKDRPLML+KP 
Sbjct: 8   NCSLISCDKLDRVASWVGSNVASAFFASLERCSCINLNTADPEDDDEEAKDRPLMLSKPT 67

Query: 302 EHD 294
             D
Sbjct: 68  VRD 70


>ref|XP_002301419.1| predicted protein [Populus trichocarpa] gi|222843145|gb|EEE80692.1|
           predicted protein [Populus trichocarpa]
          Length = 72

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 36/60 (60%), Positives = 43/60 (71%)
 Frame = -1

Query: 491 PKMENSSLISYEKLDRVANWLSTSVASAFFASLERCSCINLSXXXXXXXXXAKDRPLMLT 312
           P   N + +S EKLDRVA+W+  +VASAFFASLERCSCINL+         A+DRPLMLT
Sbjct: 13  PNNNNCNFMSCEKLDRVASWVGVNVASAFFASLERCSCINLNTTDLEDDEEARDRPLMLT 72


>ref|XP_003528786.1| PREDICTED: uncharacterized protein LOC100804412 [Glycine max]
          Length = 90

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 36/72 (50%), Positives = 42/72 (58%)
 Frame = -1

Query: 521 TKPRNLRIRAPKMENSSLISYEKLDRVANWLSTSVASAFFASLERCSCINLSXXXXXXXX 342
           T   N    +    N   +S +KLDRVANW+  +VASAFFASLERCSCINLS        
Sbjct: 7   TNNSNSNSNSNSNNNCGFMSCDKLDRVANWVGANVASAFFASLERCSCINLSIKDNEDDT 66

Query: 341 XAKDRPLMLTKP 306
              DRPL L+ P
Sbjct: 67  NNDDRPLFLSHP 78


>ref|XP_004145950.1| PREDICTED: uncharacterized protein LOC101207351 [Cucumis sativus]
          Length = 124

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 43/96 (44%), Positives = 51/96 (53%), Gaps = 9/96 (9%)
 Frame = -1

Query: 518 KPRNLRIRAPKMENSSLISYEKLDRVANWLSTSVASAFFASLERCSCINLS-XXXXXXXX 342
           K +  +   P    S+ +SYEKL+ +A W+ TSVASAFFASLERCSCINLS         
Sbjct: 29  KKKKKKSPIPMENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDPE 88

Query: 341 XAKDRPLMLTKPIEHDVFET--------NDVDKLPV 258
            A DRPLM        V  +        NDV  LPV
Sbjct: 89  EAHDRPLMYCTSTSSSVIRSFEPLPPPVNDVANLPV 124


Top