BLASTX nr result

ID: Cimicifuga21_contig00000720 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00000720
         (751 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001241299.1| uncharacterized protein LOC100811201 [Glycin...   192   6e-47
ref|XP_002304206.1| hypothetical protein POPTRDRAFT_712066 [Popu...   191   2e-46
ref|XP_002284496.1| PREDICTED: photosystem I reaction center sub...   191   2e-46
ref|NP_001236618.1| uncharacterized protein LOC100499832 [Glycin...   190   3e-46
ref|XP_002516025.1| Photosystem I reaction center subunit VI, ch...   187   3e-45

>ref|NP_001241299.1| uncharacterized protein LOC100811201 [Glycine max]
           gi|255626535|gb|ACU13612.1| unknown [Glycine max]
          Length = 144

 Score =  192 bits (488), Expect = 6e-47
 Identities = 97/124 (78%), Positives = 103/124 (83%)
 Frame = -2

Query: 612 MASLATMAAVQPVAIKGLGGSSISGTKLSVKPARRTVARTNLRSGAVVAKYGDKSVYFDL 433
           MASLAT+AAVQP A+ GL GSS+SGTKLS KP+R TV   N RSGAVVAKYGDKSVYFDL
Sbjct: 1   MASLATLAAVQPAALNGLAGSSLSGTKLSFKPSRHTVKSKNFRSGAVVAKYGDKSVYFDL 60

Query: 432 EDIGNTTGQWDVYGSDAPSPYNPLQSKFFETFAAPFTKRXXXXXXXXXXXGSTLAYLSAT 253
           ED+GNTTGQWD+YGSDAPSPYNPLQSKFFETFAAPFTKR           GSTLAY SAT
Sbjct: 61  EDLGNTTGQWDLYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFSAT 120

Query: 252 ASGD 241
           ASGD
Sbjct: 121 ASGD 124


>ref|XP_002304206.1| hypothetical protein POPTRDRAFT_712066 [Populus trichocarpa]
           gi|118487059|gb|ABK95360.1| unknown [Populus
           trichocarpa] gi|222841638|gb|EEE79185.1| hypothetical
           protein POPTRDRAFT_712066 [Populus trichocarpa]
          Length = 144

 Score =  191 bits (484), Expect = 2e-46
 Identities = 97/124 (78%), Positives = 104/124 (83%)
 Frame = -2

Query: 612 MASLATMAAVQPVAIKGLGGSSISGTKLSVKPARRTVARTNLRSGAVVAKYGDKSVYFDL 433
           MASLAT AAVQP  IKGLGGSS+SGTKL VKP+R+ +   +LRSGAVVAKYGDKSVYFDL
Sbjct: 1   MASLATFAAVQPATIKGLGGSSLSGTKLHVKPSRQGLRPKSLRSGAVVAKYGDKSVYFDL 60

Query: 432 EDIGNTTGQWDVYGSDAPSPYNPLQSKFFETFAAPFTKRXXXXXXXXXXXGSTLAYLSAT 253
           ED+GNTTGQWD+YGSDAPSPYNPLQSKFFETFAAPFTKR           GSTLAY SAT
Sbjct: 61  EDLGNTTGQWDLYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFSAT 120

Query: 252 ASGD 241
           ASGD
Sbjct: 121 ASGD 124


>ref|XP_002284496.1| PREDICTED: photosystem I reaction center subunit VI, chloroplastic
           isoform 1 [Vitis vinifera]
           gi|225442613|ref|XP_002284498.1| PREDICTED: photosystem
           I reaction center subunit VI, chloroplastic isoform 2
           [Vitis vinifera] gi|359482927|ref|XP_003632861.1|
           PREDICTED: photosystem I reaction center subunit VI,
           chloroplastic [Vitis vinifera]
           gi|147865862|emb|CAN78973.1| hypothetical protein
           VITISV_006187 [Vitis vinifera]
           gi|297743260|emb|CBI36127.3| unnamed protein product
           [Vitis vinifera]
          Length = 144

 Score =  191 bits (484), Expect = 2e-46
 Identities = 98/124 (79%), Positives = 105/124 (84%)
 Frame = -2

Query: 612 MASLATMAAVQPVAIKGLGGSSISGTKLSVKPARRTVARTNLRSGAVVAKYGDKSVYFDL 433
           MASLAT+AAVQP+ IKGL GSSISGTKLSVKPARR++   N R+GAVVAKYGDKSVYFDL
Sbjct: 1   MASLATLAAVQPINIKGLAGSSISGTKLSVKPARRSLRVGNSRAGAVVAKYGDKSVYFDL 60

Query: 432 EDIGNTTGQWDVYGSDAPSPYNPLQSKFFETFAAPFTKRXXXXXXXXXXXGSTLAYLSAT 253
           ED+GNTTGQWDVYGSDAPSPYNPLQSKFFETFAAPFTKR           GS LAY+SAT
Sbjct: 61  EDLGNTTGQWDVYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLLLGGGSVLAYVSAT 120

Query: 252 ASGD 241
           AS D
Sbjct: 121 ASDD 124


>ref|NP_001236618.1| uncharacterized protein LOC100499832 [Glycine max]
           gi|255627007|gb|ACU13848.1| unknown [Glycine max]
          Length = 144

 Score =  190 bits (482), Expect = 3e-46
 Identities = 96/124 (77%), Positives = 102/124 (82%)
 Frame = -2

Query: 612 MASLATMAAVQPVAIKGLGGSSISGTKLSVKPARRTVARTNLRSGAVVAKYGDKSVYFDL 433
           MASLAT+AAVQP  I GL GSS+SGTKLS KP+R +V   N RSGAVVAKYGDKSVYFDL
Sbjct: 1   MASLATLAAVQPATINGLAGSSLSGTKLSFKPSRHSVKSKNFRSGAVVAKYGDKSVYFDL 60

Query: 432 EDIGNTTGQWDVYGSDAPSPYNPLQSKFFETFAAPFTKRXXXXXXXXXXXGSTLAYLSAT 253
           ED+GNTTGQWD+YGSDAPSPYNPLQSKFFETFAAPFTKR           GSTLAY SAT
Sbjct: 61  EDLGNTTGQWDLYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFSAT 120

Query: 252 ASGD 241
           ASGD
Sbjct: 121 ASGD 124


>ref|XP_002516025.1| Photosystem I reaction center subunit VI, chloroplast precursor,
           putative [Ricinus communis] gi|223544930|gb|EEF46445.1|
           Photosystem I reaction center subunit VI, chloroplast
           precursor, putative [Ricinus communis]
          Length = 144

 Score =  187 bits (474), Expect = 3e-45
 Identities = 93/124 (75%), Positives = 104/124 (83%)
 Frame = -2

Query: 612 MASLATMAAVQPVAIKGLGGSSISGTKLSVKPARRTVARTNLRSGAVVAKYGDKSVYFDL 433
           MASLAT AAVQP  +KGLGGSS++GTKL VKP+R+++   N R+GAV AKYGDKSVYFDL
Sbjct: 1   MASLATFAAVQPATVKGLGGSSLTGTKLHVKPSRQSLRPKNRRNGAVEAKYGDKSVYFDL 60

Query: 432 EDIGNTTGQWDVYGSDAPSPYNPLQSKFFETFAAPFTKRXXXXXXXXXXXGSTLAYLSAT 253
           ED+GNTTGQWD+YGSDAPSPYNPLQSKFFETFAAPFTKR           GSTLAYLSAT
Sbjct: 61  EDLGNTTGQWDLYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYLSAT 120

Query: 252 ASGD 241
           A+GD
Sbjct: 121 ATGD 124


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