BLASTX nr result
ID: Cimicifuga21_contig00000720
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00000720 (751 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_001241299.1| uncharacterized protein LOC100811201 [Glycin... 192 6e-47 ref|XP_002304206.1| hypothetical protein POPTRDRAFT_712066 [Popu... 191 2e-46 ref|XP_002284496.1| PREDICTED: photosystem I reaction center sub... 191 2e-46 ref|NP_001236618.1| uncharacterized protein LOC100499832 [Glycin... 190 3e-46 ref|XP_002516025.1| Photosystem I reaction center subunit VI, ch... 187 3e-45 >ref|NP_001241299.1| uncharacterized protein LOC100811201 [Glycine max] gi|255626535|gb|ACU13612.1| unknown [Glycine max] Length = 144 Score = 192 bits (488), Expect = 6e-47 Identities = 97/124 (78%), Positives = 103/124 (83%) Frame = -2 Query: 612 MASLATMAAVQPVAIKGLGGSSISGTKLSVKPARRTVARTNLRSGAVVAKYGDKSVYFDL 433 MASLAT+AAVQP A+ GL GSS+SGTKLS KP+R TV N RSGAVVAKYGDKSVYFDL Sbjct: 1 MASLATLAAVQPAALNGLAGSSLSGTKLSFKPSRHTVKSKNFRSGAVVAKYGDKSVYFDL 60 Query: 432 EDIGNTTGQWDVYGSDAPSPYNPLQSKFFETFAAPFTKRXXXXXXXXXXXGSTLAYLSAT 253 ED+GNTTGQWD+YGSDAPSPYNPLQSKFFETFAAPFTKR GSTLAY SAT Sbjct: 61 EDLGNTTGQWDLYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFSAT 120 Query: 252 ASGD 241 ASGD Sbjct: 121 ASGD 124 >ref|XP_002304206.1| hypothetical protein POPTRDRAFT_712066 [Populus trichocarpa] gi|118487059|gb|ABK95360.1| unknown [Populus trichocarpa] gi|222841638|gb|EEE79185.1| hypothetical protein POPTRDRAFT_712066 [Populus trichocarpa] Length = 144 Score = 191 bits (484), Expect = 2e-46 Identities = 97/124 (78%), Positives = 104/124 (83%) Frame = -2 Query: 612 MASLATMAAVQPVAIKGLGGSSISGTKLSVKPARRTVARTNLRSGAVVAKYGDKSVYFDL 433 MASLAT AAVQP IKGLGGSS+SGTKL VKP+R+ + +LRSGAVVAKYGDKSVYFDL Sbjct: 1 MASLATFAAVQPATIKGLGGSSLSGTKLHVKPSRQGLRPKSLRSGAVVAKYGDKSVYFDL 60 Query: 432 EDIGNTTGQWDVYGSDAPSPYNPLQSKFFETFAAPFTKRXXXXXXXXXXXGSTLAYLSAT 253 ED+GNTTGQWD+YGSDAPSPYNPLQSKFFETFAAPFTKR GSTLAY SAT Sbjct: 61 EDLGNTTGQWDLYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFSAT 120 Query: 252 ASGD 241 ASGD Sbjct: 121 ASGD 124 >ref|XP_002284496.1| PREDICTED: photosystem I reaction center subunit VI, chloroplastic isoform 1 [Vitis vinifera] gi|225442613|ref|XP_002284498.1| PREDICTED: photosystem I reaction center subunit VI, chloroplastic isoform 2 [Vitis vinifera] gi|359482927|ref|XP_003632861.1| PREDICTED: photosystem I reaction center subunit VI, chloroplastic [Vitis vinifera] gi|147865862|emb|CAN78973.1| hypothetical protein VITISV_006187 [Vitis vinifera] gi|297743260|emb|CBI36127.3| unnamed protein product [Vitis vinifera] Length = 144 Score = 191 bits (484), Expect = 2e-46 Identities = 98/124 (79%), Positives = 105/124 (84%) Frame = -2 Query: 612 MASLATMAAVQPVAIKGLGGSSISGTKLSVKPARRTVARTNLRSGAVVAKYGDKSVYFDL 433 MASLAT+AAVQP+ IKGL GSSISGTKLSVKPARR++ N R+GAVVAKYGDKSVYFDL Sbjct: 1 MASLATLAAVQPINIKGLAGSSISGTKLSVKPARRSLRVGNSRAGAVVAKYGDKSVYFDL 60 Query: 432 EDIGNTTGQWDVYGSDAPSPYNPLQSKFFETFAAPFTKRXXXXXXXXXXXGSTLAYLSAT 253 ED+GNTTGQWDVYGSDAPSPYNPLQSKFFETFAAPFTKR GS LAY+SAT Sbjct: 61 EDLGNTTGQWDVYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLLLGGGSVLAYVSAT 120 Query: 252 ASGD 241 AS D Sbjct: 121 ASDD 124 >ref|NP_001236618.1| uncharacterized protein LOC100499832 [Glycine max] gi|255627007|gb|ACU13848.1| unknown [Glycine max] Length = 144 Score = 190 bits (482), Expect = 3e-46 Identities = 96/124 (77%), Positives = 102/124 (82%) Frame = -2 Query: 612 MASLATMAAVQPVAIKGLGGSSISGTKLSVKPARRTVARTNLRSGAVVAKYGDKSVYFDL 433 MASLAT+AAVQP I GL GSS+SGTKLS KP+R +V N RSGAVVAKYGDKSVYFDL Sbjct: 1 MASLATLAAVQPATINGLAGSSLSGTKLSFKPSRHSVKSKNFRSGAVVAKYGDKSVYFDL 60 Query: 432 EDIGNTTGQWDVYGSDAPSPYNPLQSKFFETFAAPFTKRXXXXXXXXXXXGSTLAYLSAT 253 ED+GNTTGQWD+YGSDAPSPYNPLQSKFFETFAAPFTKR GSTLAY SAT Sbjct: 61 EDLGNTTGQWDLYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFSAT 120 Query: 252 ASGD 241 ASGD Sbjct: 121 ASGD 124 >ref|XP_002516025.1| Photosystem I reaction center subunit VI, chloroplast precursor, putative [Ricinus communis] gi|223544930|gb|EEF46445.1| Photosystem I reaction center subunit VI, chloroplast precursor, putative [Ricinus communis] Length = 144 Score = 187 bits (474), Expect = 3e-45 Identities = 93/124 (75%), Positives = 104/124 (83%) Frame = -2 Query: 612 MASLATMAAVQPVAIKGLGGSSISGTKLSVKPARRTVARTNLRSGAVVAKYGDKSVYFDL 433 MASLAT AAVQP +KGLGGSS++GTKL VKP+R+++ N R+GAV AKYGDKSVYFDL Sbjct: 1 MASLATFAAVQPATVKGLGGSSLTGTKLHVKPSRQSLRPKNRRNGAVEAKYGDKSVYFDL 60 Query: 432 EDIGNTTGQWDVYGSDAPSPYNPLQSKFFETFAAPFTKRXXXXXXXXXXXGSTLAYLSAT 253 ED+GNTTGQWD+YGSDAPSPYNPLQSKFFETFAAPFTKR GSTLAYLSAT Sbjct: 61 EDLGNTTGQWDLYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYLSAT 120 Query: 252 ASGD 241 A+GD Sbjct: 121 ATGD 124