BLASTX nr result

ID: Cimicifuga21_contig00000717 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00000717
         (1612 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABW89460.1| glutamine synthetase [Gossypium herbaceum] gi|159...   620   e-175
gb|ABW89463.1| glutamine synthetase [Gossypium raimondii]             620   e-175
ref|XP_002301683.1| predicted protein [Populus trichocarpa] gi|2...   620   e-175
gb|ABK94934.1| unknown [Populus trichocarpa] gi|118486859|gb|ABK...   620   e-175
gb|ABW89461.1| glutamine synthetase [Gossypium hirsutum]              618   e-174

>gb|ABW89460.1| glutamine synthetase [Gossypium herbaceum]
            gi|159138933|gb|ABW89466.1| glutamine synthetase
            [Gossypium hirsutum]
          Length = 356

 Score =  620 bits (1600), Expect = e-175
 Identities = 296/343 (86%), Positives = 310/343 (90%)
 Frame = +3

Query: 297  EITDKVIAEYIWIGGSGLDIRSKGRTLSGPVTDPKKLPKWNYDGSSTGQAPGEDSEVILY 476
            + TDK+IAEYIWIGGSG+D+RSK RTLSGPV+DP KLPKWNYDGSSTGQAPGEDSEVILY
Sbjct: 14   DCTDKIIAEYIWIGGSGMDLRSKARTLSGPVSDPSKLPKWNYDGSSTGQAPGEDSEVILY 73

Query: 477  PQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRCNAAKIFSHPDVVGEEPWYGIEQEYT 656
            PQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRCNAAKIFSHPDV  EEPWYGIEQEYT
Sbjct: 74   PQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRCNAAKIFSHPDVAAEEPWYGIEQEYT 133

Query: 657  LLQKDVKXXXXXXXXXXXXXXXXXXXXXXXDKAFGRDIVDAHYKACLYAGINISGINGEV 836
            LLQKDVK                       DKA+GRDIVD+HYKACLYAGINISGINGEV
Sbjct: 134  LLQKDVKWPIGWPLGGYPGPQGPYYCGVGVDKAYGRDIVDSHYKACLYAGINISGINGEV 193

Query: 837  MPGQWEFQVGPAVGISAGDELWVARYILERITEIAGVILSFDPKPIQGDWNGAGAHCNYS 1016
            MPGQWEFQVGPAVGISAGDELWVARYILERITEIAGV+LSFDPKPIQGDWNGAGAH NYS
Sbjct: 194  MPGQWEFQVGPAVGISAGDELWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHTNYS 253

Query: 1017 TKSMRNEGGYEVIKKAIDKLGLRHKEHIAAYGEGNERRLTGHHETADINSFKWGVANRGA 1196
            TKSMR++GGYEVIKKAI KLGLRHKEHIAAYGEGNERRLTG HETADIN+F WGVANRGA
Sbjct: 254  TKSMRSDGGYEVIKKAIAKLGLRHKEHIAAYGEGNERRLTGRHETADINTFLWGVANRGA 313

Query: 1197 SVRVGRETEKEGKGYFEDRRPASNMDPYVVTSMVAETTILWKP 1325
            S+RVGR+TEK GKGYFEDRRPASNMDPYVVTSM+AETTILWKP
Sbjct: 314  SIRVGRDTEKAGKGYFEDRRPASNMDPYVVTSMIAETTILWKP 356


>gb|ABW89463.1| glutamine synthetase [Gossypium raimondii]
          Length = 356

 Score =  620 bits (1599), Expect = e-175
 Identities = 295/343 (86%), Positives = 310/343 (90%)
 Frame = +3

Query: 297  EITDKVIAEYIWIGGSGLDIRSKGRTLSGPVTDPKKLPKWNYDGSSTGQAPGEDSEVILY 476
            + TDK+IAEYIWIGGSG+D+RSK RTLSGPV+DP KLPKWNYDGSSTGQAPGEDSEVILY
Sbjct: 14   DCTDKIIAEYIWIGGSGMDLRSKARTLSGPVSDPSKLPKWNYDGSSTGQAPGEDSEVILY 73

Query: 477  PQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRCNAAKIFSHPDVVGEEPWYGIEQEYT 656
            PQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRCNAAKIFSHPDV  EEPWYGIEQEYT
Sbjct: 74   PQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRCNAAKIFSHPDVAAEEPWYGIEQEYT 133

Query: 657  LLQKDVKXXXXXXXXXXXXXXXXXXXXXXXDKAFGRDIVDAHYKACLYAGINISGINGEV 836
            LLQKDVK                       DKA+GRDIVD+HYKACLYAGINISGINGEV
Sbjct: 134  LLQKDVKWPIGWPLGGYPGPQGPYYCGVGVDKAYGRDIVDSHYKACLYAGINISGINGEV 193

Query: 837  MPGQWEFQVGPAVGISAGDELWVARYILERITEIAGVILSFDPKPIQGDWNGAGAHCNYS 1016
            MPGQWEFQVGPAVGISAGDELWVARYILERITE AGV+LSFDPKPIQGDWNGAGAH NYS
Sbjct: 194  MPGQWEFQVGPAVGISAGDELWVARYILERITETAGVVLSFDPKPIQGDWNGAGAHTNYS 253

Query: 1017 TKSMRNEGGYEVIKKAIDKLGLRHKEHIAAYGEGNERRLTGHHETADINSFKWGVANRGA 1196
            TKSMR++GGYEVIKKAI+KLGLRHKEHIAAYGEGNERRLTG HETADIN+F WGVANRGA
Sbjct: 254  TKSMRSDGGYEVIKKAIEKLGLRHKEHIAAYGEGNERRLTGRHETADINTFLWGVANRGA 313

Query: 1197 SVRVGRETEKEGKGYFEDRRPASNMDPYVVTSMVAETTILWKP 1325
            S+RVGR+TEK GKGYFEDRRPASNMDPYVVTSM+AETTILWKP
Sbjct: 314  SIRVGRDTEKAGKGYFEDRRPASNMDPYVVTSMIAETTILWKP 356


>ref|XP_002301683.1| predicted protein [Populus trichocarpa] gi|222843409|gb|EEE80956.1|
            predicted protein [Populus trichocarpa]
          Length = 358

 Score =  620 bits (1598), Expect = e-175
 Identities = 293/341 (85%), Positives = 309/341 (90%)
 Frame = +3

Query: 303  TDKVIAEYIWIGGSGLDIRSKGRTLSGPVTDPKKLPKWNYDGSSTGQAPGEDSEVILYPQ 482
            T+K+IAEYIW+GGSG+DIRSKGRTL GPV+DP KLPKWNYDGSSTGQAPGEDSEVILYPQ
Sbjct: 16   TEKIIAEYIWVGGSGMDIRSKGRTLPGPVSDPSKLPKWNYDGSSTGQAPGEDSEVILYPQ 75

Query: 483  AIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRCNAAKIFSHPDVVGEEPWYGIEQEYTLL 662
            AIFKDPFRRGNNILV+CD YTPAGEPIPTNKRC AAKIFSHPDVV E PWYG+EQEYTLL
Sbjct: 76   AIFKDPFRRGNNILVICDTYTPAGEPIPTNKRCKAAKIFSHPDVVAEVPWYGLEQEYTLL 135

Query: 663  QKDVKXXXXXXXXXXXXXXXXXXXXXXXDKAFGRDIVDAHYKACLYAGINISGINGEVMP 842
            QKDVK                       DKAFGRDIVDAHYKACLYAGINISGINGEVMP
Sbjct: 136  QKDVKWPLGWPIGGYPGPQGPYYCGAGVDKAFGRDIVDAHYKACLYAGINISGINGEVMP 195

Query: 843  GQWEFQVGPAVGISAGDELWVARYILERITEIAGVILSFDPKPIQGDWNGAGAHCNYSTK 1022
            GQWEFQVGP+VGIS+GDELW ARYILERITE+AGV+LSFDPKPIQGDWNGAGAH NYSTK
Sbjct: 196  GQWEFQVGPSVGISSGDELWAARYILERITEVAGVVLSFDPKPIQGDWNGAGAHTNYSTK 255

Query: 1023 SMRNEGGYEVIKKAIDKLGLRHKEHIAAYGEGNERRLTGHHETADINSFKWGVANRGASV 1202
            SMRNEGGYEVIKKAI+KLGLRHKEHIAAYGEGNERRLTG HETADIN+FKWGVANRGAS+
Sbjct: 256  SMRNEGGYEVIKKAIEKLGLRHKEHIAAYGEGNERRLTGRHETADINTFKWGVANRGASI 315

Query: 1203 RVGRETEKEGKGYFEDRRPASNMDPYVVTSMVAETTILWKP 1325
            RVGR+TEKEGKGYFEDRRPASNMDPYVVTSM+AETTILWKP
Sbjct: 316  RVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTILWKP 356


>gb|ABK94934.1| unknown [Populus trichocarpa] gi|118486859|gb|ABK95264.1| unknown
            [Populus trichocarpa]
          Length = 356

 Score =  620 bits (1598), Expect = e-175
 Identities = 293/341 (85%), Positives = 309/341 (90%)
 Frame = +3

Query: 303  TDKVIAEYIWIGGSGLDIRSKGRTLSGPVTDPKKLPKWNYDGSSTGQAPGEDSEVILYPQ 482
            T+K+IAEYIW+GGSG+DIRSKGRTL GPV+DP KLPKWNYDGSSTGQAPGEDSEVILYPQ
Sbjct: 16   TEKIIAEYIWVGGSGMDIRSKGRTLPGPVSDPSKLPKWNYDGSSTGQAPGEDSEVILYPQ 75

Query: 483  AIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRCNAAKIFSHPDVVGEEPWYGIEQEYTLL 662
            AIFKDPFRRGNNILV+CD YTPAGEPIPTNKRC AAKIFSHPDVV E PWYG+EQEYTLL
Sbjct: 76   AIFKDPFRRGNNILVICDTYTPAGEPIPTNKRCKAAKIFSHPDVVAEVPWYGLEQEYTLL 135

Query: 663  QKDVKXXXXXXXXXXXXXXXXXXXXXXXDKAFGRDIVDAHYKACLYAGINISGINGEVMP 842
            QKDVK                       DKAFGRDIVDAHYKACLYAGINISGINGEVMP
Sbjct: 136  QKDVKWPLGWPIGGYPGPQGPYYCGAGVDKAFGRDIVDAHYKACLYAGINISGINGEVMP 195

Query: 843  GQWEFQVGPAVGISAGDELWVARYILERITEIAGVILSFDPKPIQGDWNGAGAHCNYSTK 1022
            GQWEFQVGP+VGIS+GDELW ARYILERITE+AGV+LSFDPKPIQGDWNGAGAH NYSTK
Sbjct: 196  GQWEFQVGPSVGISSGDELWAARYILERITEVAGVVLSFDPKPIQGDWNGAGAHTNYSTK 255

Query: 1023 SMRNEGGYEVIKKAIDKLGLRHKEHIAAYGEGNERRLTGHHETADINSFKWGVANRGASV 1202
            SMRNEGGYEVIKKAI+KLGLRHKEHIAAYGEGNERRLTG HETADIN+FKWGVANRGAS+
Sbjct: 256  SMRNEGGYEVIKKAIEKLGLRHKEHIAAYGEGNERRLTGRHETADINTFKWGVANRGASI 315

Query: 1203 RVGRETEKEGKGYFEDRRPASNMDPYVVTSMVAETTILWKP 1325
            RVGR+TEKEGKGYFEDRRPASNMDPYVVTSM+AETTILWKP
Sbjct: 316  RVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTILWKP 356


>gb|ABW89461.1| glutamine synthetase [Gossypium hirsutum]
          Length = 356

 Score =  618 bits (1594), Expect = e-174
 Identities = 295/343 (86%), Positives = 309/343 (90%)
 Frame = +3

Query: 297  EITDKVIAEYIWIGGSGLDIRSKGRTLSGPVTDPKKLPKWNYDGSSTGQAPGEDSEVILY 476
            + TDK+IAEYIWIGGSG+D+RSK RTLSGPV+DP KLPKWNYDGSSTGQAPGEDSEVILY
Sbjct: 14   DCTDKIIAEYIWIGGSGMDLRSKARTLSGPVSDPSKLPKWNYDGSSTGQAPGEDSEVILY 73

Query: 477  PQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRCNAAKIFSHPDVVGEEPWYGIEQEYT 656
            PQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRCNAAKIFSHPDV  EEPWYGIEQEYT
Sbjct: 74   PQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRCNAAKIFSHPDVAAEEPWYGIEQEYT 133

Query: 657  LLQKDVKXXXXXXXXXXXXXXXXXXXXXXXDKAFGRDIVDAHYKACLYAGINISGINGEV 836
            LLQKDVK                       DKA+GRDIVD+HYKACLYAGINISGINGEV
Sbjct: 134  LLQKDVKWPIGWPLGGYPGPQGPYYCGVGVDKAYGRDIVDSHYKACLYAGINISGINGEV 193

Query: 837  MPGQWEFQVGPAVGISAGDELWVARYILERITEIAGVILSFDPKPIQGDWNGAGAHCNYS 1016
            MPGQWEFQVGPAVGISAGDELWVARYILERITEIAGV+LSFDPKPIQGDWNGAGAH NYS
Sbjct: 194  MPGQWEFQVGPAVGISAGDELWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHTNYS 253

Query: 1017 TKSMRNEGGYEVIKKAIDKLGLRHKEHIAAYGEGNERRLTGHHETADINSFKWGVANRGA 1196
            TKSMR++GGYEVIKKAI KLGLRHKEHIAAYGEGNERRLTG HETADIN+F WGVANRGA
Sbjct: 254  TKSMRSDGGYEVIKKAIAKLGLRHKEHIAAYGEGNERRLTGRHETADINTFLWGVANRGA 313

Query: 1197 SVRVGRETEKEGKGYFEDRRPASNMDPYVVTSMVAETTILWKP 1325
            S+RVGR+ EK GKGYFEDRRPASNMDPYVVTSM+AETTILWKP
Sbjct: 314  SIRVGRDIEKAGKGYFEDRRPASNMDPYVVTSMIAETTILWKP 356


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