BLASTX nr result

ID: Cimicifuga21_contig00000714 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00000714
         (407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276679.2| PREDICTED: probable ATP-dependent RNA helica...    85   7e-15
emb|CBI30650.3| unnamed protein product [Vitis vinifera]               85   7e-15
ref|XP_002522527.1| ATP-dependent RNA helicase, putative [Ricinu...    85   7e-15
emb|CAN78274.1| hypothetical protein VITISV_037787 [Vitis vinifera]    85   7e-15
ref|XP_004148780.1| PREDICTED: probable ATP-dependent RNA helica...    80   1e-13

>ref|XP_002276679.2| PREDICTED: probable ATP-dependent RNA helicase DHX35 [Vitis
           vinifera]
          Length = 695

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 41/48 (85%), Positives = 44/48 (91%)
 Frame = +2

Query: 56  EVLRKAVTAGFFANACRLEAFSQAGMYKTIRSSQEVYIHPSFVLFRIN 199
           EV+RKAVTAGFFANAC LEA SQ GMYKTIRS+QEVYIHPS VLFR+N
Sbjct: 603 EVVRKAVTAGFFANACCLEAHSQGGMYKTIRSAQEVYIHPSSVLFRVN 650


>emb|CBI30650.3| unnamed protein product [Vitis vinifera]
          Length = 694

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 41/48 (85%), Positives = 44/48 (91%)
 Frame = +2

Query: 56  EVLRKAVTAGFFANACRLEAFSQAGMYKTIRSSQEVYIHPSFVLFRIN 199
           EV+RKAVTAGFFANAC LEA SQ GMYKTIRS+QEVYIHPS VLFR+N
Sbjct: 602 EVVRKAVTAGFFANACCLEAHSQGGMYKTIRSAQEVYIHPSSVLFRVN 649


>ref|XP_002522527.1| ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223538218|gb|EEF39827.1| ATP-dependent RNA helicase,
           putative [Ricinus communis]
          Length = 696

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 39/47 (82%), Positives = 43/47 (91%)
 Frame = +2

Query: 59  VLRKAVTAGFFANACRLEAFSQAGMYKTIRSSQEVYIHPSFVLFRIN 199
           ++RKAVTAGFFANACRLEAFS  GMYKT+R SQEVYIHPS VLFR+N
Sbjct: 604 IVRKAVTAGFFANACRLEAFSHNGMYKTVRGSQEVYIHPSSVLFRVN 650


>emb|CAN78274.1| hypothetical protein VITISV_037787 [Vitis vinifera]
          Length = 235

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 41/48 (85%), Positives = 44/48 (91%)
 Frame = +2

Query: 56  EVLRKAVTAGFFANACRLEAFSQAGMYKTIRSSQEVYIHPSFVLFRIN 199
           EV+RKAVTAGFFANAC LEA SQ GMYKTIRS+QEVYIHPS VLFR+N
Sbjct: 143 EVVRKAVTAGFFANACCLEAHSQGGMYKTIRSAQEVYIHPSSVLFRVN 190


>ref|XP_004148780.1| PREDICTED: probable ATP-dependent RNA helicase DHX35-like [Cucumis
           sativus] gi|449515633|ref|XP_004164853.1| PREDICTED:
           probable ATP-dependent RNA helicase DHX35-like [Cucumis
           sativus]
          Length = 696

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 36/46 (78%), Positives = 42/46 (91%)
 Frame = +2

Query: 62  LRKAVTAGFFANACRLEAFSQAGMYKTIRSSQEVYIHPSFVLFRIN 199
           +RKAVTAGFFANAC++EA+S  GMYKT+R SQEVYIHPS VLFR+N
Sbjct: 605 IRKAVTAGFFANACQIEAYSHNGMYKTVRGSQEVYIHPSSVLFRVN 650


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