BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00000709
         (699 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307627.1| hypothetical protein POPTRDRAFT_715100 [Popu...   122   5e-26
sp|Q41387.1|PSBW_SPIOL RecName: Full=Photosystem II reaction cen...   122   7e-26
ref|NP_001235636.1| uncharacterized protein LOC100306223 [Glycin...   122   7e-26
ref|XP_002264508.1| PREDICTED: photosystem II reaction center W ...   121   1e-25
gb|AFK39129.1| unknown [Lotus japonicus] gi|388511197|gb|AFK4366...   120   3e-25

>ref|XP_002307627.1| hypothetical protein POPTRDRAFT_715100 [Populus trichocarpa]
           gi|118486017|gb|ABK94852.1| unknown [Populus
           trichocarpa] gi|222857076|gb|EEE94623.1| hypothetical
           protein POPTRDRAFT_715100 [Populus trichocarpa]
          Length = 134

 Score =  122 bits (307), Expect = 5e-26
 Identities = 65/102 (63%), Positives = 70/102 (68%)
 Frame = -3

Query: 538 SIGVSSSPVLGLPAMARRGGARCSAEGKPSSSETXXXXXXXXXXXXXXXXXXXSNPALAL 359
           S+GVS SPVLGLPAMA++G   CS EGKPS  E                     +PALAL
Sbjct: 24  SLGVSCSPVLGLPAMAKKGRVSCSMEGKPSVEEKCKGMSASLMAAVCAASMS--SPALAL 81

Query: 358 VDERLSTEGTGLPFGLSNNLLGWILFGVFGLIWTLYFTYTAT 233
           VDER+STEGTGLPFGLSNNLL WIL GVF LIW LYFTYTAT
Sbjct: 82  VDERMSTEGTGLPFGLSNNLLVWILLGVFALIWALYFTYTAT 123


>sp|Q41387.1|PSBW_SPIOL RecName: Full=Photosystem II reaction center W protein,
           chloroplastic; AltName: Full=PSII 6.1 kDa protein;
           Flags: Precursor gi|728716|emb|CAA59409.1| protein of
           photosystem II [Spinacia oleracea]
          Length = 137

 Score =  122 bits (306), Expect = 7e-26
 Identities = 61/102 (59%), Positives = 71/102 (69%), Gaps = 2/102 (1%)
 Frame = -3

Query: 535 IGVSSSPVLGLPAMARRGGARCSAEGKPSSSETXXXXXXXXXXXXXXXXXXXS--NPALA 362
           +GVSSSP+LGLP+M +R    CS E KPS++ET                   +  NPA+A
Sbjct: 24  VGVSSSPILGLPSMTKRSKVTCSIENKPSTTETTTTTNKSMGASLLAAAAAATISNPAMA 83

Query: 361 LVDERLSTEGTGLPFGLSNNLLGWILFGVFGLIWTLYFTYTA 236
           LVDER+STEGTGLPFGLSNNLLGWILFGVFGLIW LYF Y +
Sbjct: 84  LVDERMSTEGTGLPFGLSNNLLGWILFGVFGLIWALYFVYAS 125


>ref|NP_001235636.1| uncharacterized protein LOC100306223 [Glycine max]
           gi|255627917|gb|ACU14303.1| unknown [Glycine max]
          Length = 132

 Score =  122 bits (306), Expect = 7e-26
 Identities = 64/101 (63%), Positives = 69/101 (68%)
 Frame = -3

Query: 535 IGVSSSPVLGLPAMARRGGARCSAEGKPSSSETXXXXXXXXXXXXXXXXXXXSNPALALV 356
           +G SSS VLGLPAMA+ G  RCS E KPSSS                      +PA+ALV
Sbjct: 24  VGASSSTVLGLPAMAKAGKVRCSMEEKPSSSSNIGMGASLLAAAVAATMS---SPAMALV 80

Query: 355 DERLSTEGTGLPFGLSNNLLGWILFGVFGLIWTLYFTYTAT 233
           DERLSTEGTGLPFGLSNNLLGWILFGVFGLIW LYF Y +T
Sbjct: 81  DERLSTEGTGLPFGLSNNLLGWILFGVFGLIWALYFVYAST 121


>ref|XP_002264508.1| PREDICTED: photosystem II reaction center W protein, chloroplastic
           [Vitis vinifera] gi|296087925|emb|CBI35208.3| unnamed
           protein product [Vitis vinifera]
          Length = 135

 Score =  121 bits (304), Expect = 1e-25
 Identities = 64/98 (65%), Positives = 69/98 (70%), Gaps = 1/98 (1%)
 Frame = -3

Query: 523 SSPVLGLPAMARRGGARCSAEGKPSSSETXXXXXXXXXXXXXXXXXXXS-NPALALVDER 347
           SSPVLGLPAMA++G  RC +E KP  S+                    S  PA+ALVDER
Sbjct: 27  SSPVLGLPAMAKKGRVRCMSEEKPCGSDMGSSISMGASLMAAAAAVAASAGPAMALVDER 86

Query: 346 LSTEGTGLPFGLSNNLLGWILFGVFGLIWTLYFTYTAT 233
           LSTEGTGLPFGLSNNLLGWILFGVFGLIW LYFTYTAT
Sbjct: 87  LSTEGTGLPFGLSNNLLGWILFGVFGLIWALYFTYTAT 124


>gb|AFK39129.1| unknown [Lotus japonicus] gi|388511197|gb|AFK43660.1| unknown
           [Lotus japonicus]
          Length = 136

 Score =  120 bits (300), Expect = 3e-25
 Identities = 62/99 (62%), Positives = 70/99 (70%), Gaps = 1/99 (1%)
 Frame = -3

Query: 529 VSSSPVLGLPAMARRGGARCSAEGKPSSSETXXXXXXXXXXXXXXXXXXXSNPA-LALVD 353
           +SSSPVLGLPA+A+ G  RCS EGKPS  E+                   S+PA +ALVD
Sbjct: 26  ISSSPVLGLPALAKVGRVRCSMEGKPSGQESSSKMGMGASLMAAASAAAMSSPAAMALVD 85

Query: 352 ERLSTEGTGLPFGLSNNLLGWILFGVFGLIWTLYFTYTA 236
           ERLSTEGTGLPFGLSNNLLGWILFGVFGLIW +YF Y +
Sbjct: 86  ERLSTEGTGLPFGLSNNLLGWILFGVFGLIWAVYFVYAS 124