BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00000706
         (1783 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285721.1| PREDICTED: tubulin alpha-1 chain [Vitis vini...   802   0.0  
ref|XP_002532068.1| tubulin alpha chain, putative [Ricinus commu...   795   0.0  
ref|NP_197478.1| tubulin alpha-3/alpha-5 chain [Arabidopsis thal...   795   0.0  
ref|XP_001782790.1| predicted protein [Physcomitrella patens sub...   795   0.0  
ref|XP_001777081.1| predicted protein [Physcomitrella patens sub...   795   0.0  

>ref|XP_002285721.1| PREDICTED: tubulin alpha-1 chain [Vitis vinifera]
          Length = 449

 Score =  802 bits (2071), Expect = 0.0
 Identities = 393/430 (91%), Positives = 399/430 (92%)
 Frame = +1

Query: 157  MREIISVHIGQAGIQVGNSCWELYCLEHGIQPDGKMPSDTTIGVGHDAFNTFFSETGAGK 336
            MREIIS+HIGQAGIQVGNSCWELYCLEHGIQPDG MPSDTT+GVGHDAFNTFFSETGAGK
Sbjct: 1    MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVGHDAFNTFFSETGAGK 60

Query: 337  HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 516
            HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD
Sbjct: 61   HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120

Query: 517  RIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTA 696
            R+RKLADNCTGLQGFLVFNAV                 VDYGKKSKLGFTIYPSPQVSTA
Sbjct: 121  RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180

Query: 697  VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRXXXXXXXXXXX 876
            VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNR           
Sbjct: 181  VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTT 240

Query: 877  XXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITSAVFEPSS 1056
              RFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEIT+AVFEPSS
Sbjct: 241  SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSS 300

Query: 1057 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVSTIKTKRTVQFVDWCPTGFKCGINYQPP 1236
            MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAV+TIKTKRTVQFVDWCPTGFKCGINYQPP
Sbjct: 301  MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPP 360

Query: 1237 TVVPGGDLAKVQRAVCMISNNTAVAEVFARIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1416
            TVVPGGDLAKVQRAVCMISNNTAVAEVF+RIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361  TVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420

Query: 1417 AREDLAALEK 1446
            AREDLAALEK
Sbjct: 421  AREDLAALEK 430


>ref|XP_002532068.1| tubulin alpha chain, putative [Ricinus communis]
            gi|223528272|gb|EEF30323.1| tubulin alpha chain, putative
            [Ricinus communis]
          Length = 449

 Score =  795 bits (2054), Expect = 0.0
 Identities = 388/430 (90%), Positives = 398/430 (92%)
 Frame = +1

Query: 157  MREIISVHIGQAGIQVGNSCWELYCLEHGIQPDGKMPSDTTIGVGHDAFNTFFSETGAGK 336
            MREIIS+HIGQAGIQVGNSCWELYCLEHGIQPDG MPSDT++GVGHDAFNTFFSETG+GK
Sbjct: 1    MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTSVGVGHDAFNTFFSETGSGK 60

Query: 337  HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 516
            HVPRA+FVDLEPTVIDEVRTG YRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD
Sbjct: 61   HVPRAVFVDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120

Query: 517  RIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTA 696
            R+RKLADNCTGLQGFLVFNAV                 VDYGKKSKLGFTIYPSPQVSTA
Sbjct: 121  RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180

Query: 697  VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRXXXXXXXXXXX 876
            VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNR           
Sbjct: 181  VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTT 240

Query: 877  XXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITSAVFEPSS 1056
              RFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEIT+AVFEPSS
Sbjct: 241  SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSS 300

Query: 1057 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVSTIKTKRTVQFVDWCPTGFKCGINYQPP 1236
            MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAV+TIKTKRTVQFVDWCPTGFKCGINYQPP
Sbjct: 301  MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPP 360

Query: 1237 TVVPGGDLAKVQRAVCMISNNTAVAEVFARIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1416
            +VVPGGDLAKVQRAVCMISNNTAVAEVF+RIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361  SVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420

Query: 1417 AREDLAALEK 1446
            AREDLAALEK
Sbjct: 421  AREDLAALEK 430


>ref|NP_197478.1| tubulin alpha-3/alpha-5 chain [Arabidopsis thaliana]
            gi|15241179|ref|NP_197479.1| tubulin alpha-3/alpha-5
            chain [Arabidopsis thaliana]
            gi|297808045|ref|XP_002871906.1| tubulin alpha-3
            [Arabidopsis lyrata subsp. lyrata]
            gi|297812159|ref|XP_002873963.1| tubulin alpha-3
            [Arabidopsis lyrata subsp. lyrata]
            gi|408407916|sp|Q56WH1.2|TBA3_ARATH RecName: Full=Tubulin
            alpha-3 chain gi|408407918|sp|B9DHQ0.2|TBA5_ARATH
            RecName: Full=Tubulin alpha-5 chain
            gi|13605805|gb|AAK32888.1|AF367301_1 AT5g19770/T29J13_190
            [Arabidopsis thaliana] gi|166912|gb|AAA32888.1|
            alpha-tubulin [Arabidopsis thaliana]
            gi|166918|gb|AAA32891.1| alpha-5 tubulin [Arabidopsis
            thaliana] gi|14532776|gb|AAK64169.1| putative tubulin
            alpha-5 chain [Arabidopsis thaliana]
            gi|17473826|gb|AAL38340.1| unknown protein [Arabidopsis
            thaliana] gi|19310733|gb|AAL85097.1| putative tubulin
            alpha-5 chain [Arabidopsis thaliana]
            gi|23397154|gb|AAN31860.1| putative tubulin alpha-5 chain
            [Arabidopsis thaliana] gi|23397156|gb|AAN31861.1|
            putative tubulin alpha-5 chain [Arabidopsis thaliana]
            gi|23505949|gb|AAN28834.1| At5g19770/T29J13_190
            [Arabidopsis thaliana] gi|24899739|gb|AAN65084.1| unknown
            protein [Arabidopsis thaliana]
            gi|297317743|gb|EFH48165.1| tubulin alpha-3 [Arabidopsis
            lyrata subsp. lyrata] gi|297319800|gb|EFH50222.1| tubulin
            alpha-3 [Arabidopsis lyrata subsp. lyrata]
            gi|332005364|gb|AED92747.1| tubulin alpha-3/alpha-5 chain
            [Arabidopsis thaliana] gi|332005365|gb|AED92748.1|
            tubulin alpha-3/alpha-5 chain [Arabidopsis thaliana]
          Length = 450

 Score =  795 bits (2054), Expect = 0.0
 Identities = 389/430 (90%), Positives = 396/430 (92%)
 Frame = +1

Query: 157  MREIISVHIGQAGIQVGNSCWELYCLEHGIQPDGKMPSDTTIGVGHDAFNTFFSETGAGK 336
            MREIIS+HIGQAGIQVGNSCWELYCLEHGIQPDG MPSDTT+GV HDAFNTFFSETGAGK
Sbjct: 1    MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60

Query: 337  HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 516
            HVPRA+FVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD
Sbjct: 61   HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120

Query: 517  RIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTA 696
            R+RKLADNCTGLQGFLVFNAV                 VDYGKKSKLGFTIYPSPQVSTA
Sbjct: 121  RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180

Query: 697  VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRXXXXXXXXXXX 876
            VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNR           
Sbjct: 181  VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTT 240

Query: 877  XXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITSAVFEPSS 1056
              RFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISA KAYHEQLSVPEIT+AVFEP+S
Sbjct: 241  SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQLSVPEITNAVFEPAS 300

Query: 1057 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVSTIKTKRTVQFVDWCPTGFKCGINYQPP 1236
            MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAV TIKTKRTVQFVDWCPTGFKCGINYQPP
Sbjct: 301  MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTVQFVDWCPTGFKCGINYQPP 360

Query: 1237 TVVPGGDLAKVQRAVCMISNNTAVAEVFARIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1416
            TVVPGGDLAKVQRAVCMISNNTAVAEVF+RIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361  TVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420

Query: 1417 AREDLAALEK 1446
            AREDLAALEK
Sbjct: 421  AREDLAALEK 430


>ref|XP_001782790.1| predicted protein [Physcomitrella patens subsp. patens]
            gi|168061676|ref|XP_001782813.1| predicted protein
            [Physcomitrella patens subsp. patens]
            gi|25396545|dbj|BAC24799.1| alpha tubulin [Physcomitrella
            patens] gi|162665692|gb|EDQ52367.1| predicted protein
            [Physcomitrella patens subsp. patens]
            gi|162665715|gb|EDQ52390.1| predicted protein
            [Physcomitrella patens subsp. patens]
          Length = 449

 Score =  795 bits (2052), Expect = 0.0
 Identities = 388/430 (90%), Positives = 398/430 (92%)
 Frame = +1

Query: 157  MREIISVHIGQAGIQVGNSCWELYCLEHGIQPDGKMPSDTTIGVGHDAFNTFFSETGAGK 336
            MREIIS+HIGQAGIQVGN+CWELYCLEHGIQPDG+MPSDTT+G G DAFNTFFSETGAGK
Sbjct: 1    MREIISIHIGQAGIQVGNACWELYCLEHGIQPDGRMPSDTTVGGGDDAFNTFFSETGAGK 60

Query: 337  HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 516
            HVPRA+FVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD
Sbjct: 61   HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120

Query: 517  RIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTA 696
            R+RKLADNCTGLQGFLVFNAV                 VDYGKKSKLGFTIYPSPQVSTA
Sbjct: 121  RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180

Query: 697  VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRXXXXXXXXXXX 876
            VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNR           
Sbjct: 181  VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTT 240

Query: 877  XXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITSAVFEPSS 1056
              RFDGA+NVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEIT+AVFEPSS
Sbjct: 241  SLRFDGALNVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSS 300

Query: 1057 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVSTIKTKRTVQFVDWCPTGFKCGINYQPP 1236
            MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAV+TIKTKRTVQFVDWCPTGFKCGINYQPP
Sbjct: 301  MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPP 360

Query: 1237 TVVPGGDLAKVQRAVCMISNNTAVAEVFARIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1416
            TVVPGGDLAKVQRAVCMISNNTAVAEVF+RIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361  TVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420

Query: 1417 AREDLAALEK 1446
            AREDLAALEK
Sbjct: 421  AREDLAALEK 430


>ref|XP_001777081.1| predicted protein [Physcomitrella patens subsp. patens]
            gi|162671524|gb|EDQ58074.1| predicted protein
            [Physcomitrella patens subsp. patens]
          Length = 449

 Score =  795 bits (2052), Expect = 0.0
 Identities = 388/430 (90%), Positives = 398/430 (92%)
 Frame = +1

Query: 157  MREIISVHIGQAGIQVGNSCWELYCLEHGIQPDGKMPSDTTIGVGHDAFNTFFSETGAGK 336
            MREIIS+HIGQAGIQVGN+CWELYCLEHGIQPDG+MPSDTT+G G DAFNTFFSETGAGK
Sbjct: 1    MREIISIHIGQAGIQVGNACWELYCLEHGIQPDGRMPSDTTVGGGDDAFNTFFSETGAGK 60

Query: 337  HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 516
            HVPRA+FVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD
Sbjct: 61   HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120

Query: 517  RIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTA 696
            R+RKLADNCTGLQGFLVFNAV                 VDYGKKSKLGFTIYPSPQVSTA
Sbjct: 121  RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180

Query: 697  VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRXXXXXXXXXXX 876
            VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNR           
Sbjct: 181  VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTT 240

Query: 877  XXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITSAVFEPSS 1056
              RFDGA+NVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEIT+AVFEPSS
Sbjct: 241  SLRFDGALNVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSS 300

Query: 1057 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVSTIKTKRTVQFVDWCPTGFKCGINYQPP 1236
            MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAV+TIKTKRTVQFVDWCPTGFKCGINYQPP
Sbjct: 301  MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPP 360

Query: 1237 TVVPGGDLAKVQRAVCMISNNTAVAEVFARIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1416
            TVVPGGDLAKVQRAVCMISNNTAVAEVF+RIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361  TVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420

Query: 1417 AREDLAALEK 1446
            AREDLAALEK
Sbjct: 421  AREDLAALEK 430