BLASTX nr result

ID: Cimicifuga21_contig00000684 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00000684
         (881 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15653.3| unnamed protein product [Vitis vinifera]              308   8e-82
ref|XP_002283698.1| PREDICTED: 60S ribosomal protein L17-2-like ...   308   8e-82
ref|XP_002279258.1| PREDICTED: 60S ribosomal protein L17-2-like ...   306   4e-81
ref|XP_003538553.1| PREDICTED: 60S ribosomal protein L17-1-like ...   303   3e-80
ref|NP_001236526.1| uncharacterized protein LOC100305777 [Glycin...   303   3e-80

>emb|CBI15653.3| unnamed protein product [Vitis vinifera]
          Length = 209

 Score =  308 bits (790), Expect = 8e-82
 Identities = 155/183 (84%), Positives = 164/183 (89%), Gaps = 2/183 (1%)
 Frame = +1

Query: 100 MVKYSQEPVNPTKSCKARGSDLRVHFKNTRETAHSIRKMQLVKAKRYLEDVLAHKQAIPF 279
           MVKYS+EP NPTKSCKARGSDLRVHFKNTRETAH+IRK++L KAKRYLEDVLAHKQAIPF
Sbjct: 27  MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLRLTKAKRYLEDVLAHKQAIPF 86

Query: 280 RRFCRGVGRTAQVKDRHPNGQGRWPVKSAKFILDLLKNAESNADVKGLDVDSLYVSHVQV 459
           +RFCRGVGRTAQ K+RH NGQGRWPVKSAKFILDLLKNAESNAD+KGLDVDSLYVSH+QV
Sbjct: 87  QRFCRGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNADLKGLDVDSLYVSHIQV 146

Query: 460 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSXXXXXXXXXXXTQLASRKTK--ASLRSG 633
           NQAQKQRRRTYRAHGRINPYMSSPCHIELILS           TQLA RKTK   +LRSG
Sbjct: 147 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVQKEPDTQLAPRKTKKTQALRSG 206

Query: 634 ASS 642
           ASS
Sbjct: 207 ASS 209


>ref|XP_002283698.1| PREDICTED: 60S ribosomal protein L17-2-like isoform 1 [Vitis
           vinifera] gi|359491070|ref|XP_003634214.1| PREDICTED:
           60S ribosomal protein L17-2-like isoform 2 [Vitis
           vinifera]
          Length = 183

 Score =  308 bits (790), Expect = 8e-82
 Identities = 155/183 (84%), Positives = 164/183 (89%), Gaps = 2/183 (1%)
 Frame = +1

Query: 100 MVKYSQEPVNPTKSCKARGSDLRVHFKNTRETAHSIRKMQLVKAKRYLEDVLAHKQAIPF 279
           MVKYS+EP NPTKSCKARGSDLRVHFKNTRETAH+IRK++L KAKRYLEDVLAHKQAIPF
Sbjct: 1   MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLRLTKAKRYLEDVLAHKQAIPF 60

Query: 280 RRFCRGVGRTAQVKDRHPNGQGRWPVKSAKFILDLLKNAESNADVKGLDVDSLYVSHVQV 459
           +RFCRGVGRTAQ K+RH NGQGRWPVKSAKFILDLLKNAESNAD+KGLDVDSLYVSH+QV
Sbjct: 61  QRFCRGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNADLKGLDVDSLYVSHIQV 120

Query: 460 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSXXXXXXXXXXXTQLASRKTK--ASLRSG 633
           NQAQKQRRRTYRAHGRINPYMSSPCHIELILS           TQLA RKTK   +LRSG
Sbjct: 121 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVQKEPDTQLAPRKTKKTQALRSG 180

Query: 634 ASS 642
           ASS
Sbjct: 181 ASS 183


>ref|XP_002279258.1| PREDICTED: 60S ribosomal protein L17-2-like [Vitis vinifera]
          Length = 185

 Score =  306 bits (784), Expect = 4e-81
 Identities = 151/184 (82%), Positives = 162/184 (88%)
 Frame = +1

Query: 100 MVKYSQEPVNPTKSCKARGSDLRVHFKNTRETAHSIRKMQLVKAKRYLEDVLAHKQAIPF 279
           MVKYS+EP NPTKSCKARGSDLRVHFKNTRETAH+IRK+ L KAKRYLEDVL HKQAIPF
Sbjct: 1   MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLVHKQAIPF 60

Query: 280 RRFCRGVGRTAQVKDRHPNGQGRWPVKSAKFILDLLKNAESNADVKGLDVDSLYVSHVQV 459
            RFCRGVGRTAQ K+RH NGQGRWPVKSAKFILDLLKNAESNAD+KGLDVDSLY+SH+QV
Sbjct: 61  TRFCRGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNADLKGLDVDSLYISHIQV 120

Query: 460 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSXXXXXXXXXXXTQLASRKTKASLRSGAS 639
           NQAQKQRRRTYRAHGRINPYMSSPCHIELILS           TQLA+ K+K SLR GAS
Sbjct: 121 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGKSKKSLRGGAS 180

Query: 640 S*VA 651
           + +A
Sbjct: 181 TRIA 184


>ref|XP_003538553.1| PREDICTED: 60S ribosomal protein L17-1-like [Glycine max]
          Length = 181

 Score =  303 bits (776), Expect = 3e-80
 Identities = 151/181 (83%), Positives = 160/181 (88%)
 Frame = +1

Query: 100 MVKYSQEPVNPTKSCKARGSDLRVHFKNTRETAHSIRKMQLVKAKRYLEDVLAHKQAIPF 279
           MVKYS+EP NPTKSCKARG+DLRVHFKNTRETA +IRK+ LVKAKRYLEDVLAHKQAIPF
Sbjct: 1   MVKYSREPDNPTKSCKARGADLRVHFKNTRETAFAIRKLPLVKAKRYLEDVLAHKQAIPF 60

Query: 280 RRFCRGVGRTAQVKDRHPNGQGRWPVKSAKFILDLLKNAESNADVKGLDVDSLYVSHVQV 459
           RRFC GVGRTAQ K RH NGQGRWPVKSAKFILDLLKNAESNA+VKGLDVD+LY+SHVQV
Sbjct: 61  RRFCGGVGRTAQAKSRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHVQV 120

Query: 460 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSXXXXXXXXXXXTQLASRKTKASLRSGAS 639
           NQAQKQRRRTYRAHGRINPYMSSPCHIELILS           TQLA+ K K +LRSGAS
Sbjct: 121 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEAETQLATSKKKGALRSGAS 180

Query: 640 S 642
           S
Sbjct: 181 S 181


>ref|NP_001236526.1| uncharacterized protein LOC100305777 [Glycine max]
           gi|255626585|gb|ACU13637.1| unknown [Glycine max]
          Length = 181

 Score =  303 bits (776), Expect = 3e-80
 Identities = 150/181 (82%), Positives = 161/181 (88%)
 Frame = +1

Query: 100 MVKYSQEPVNPTKSCKARGSDLRVHFKNTRETAHSIRKMQLVKAKRYLEDVLAHKQAIPF 279
           MVKYS+EP NPTKSCKARG+DLRVHFKNTRETA +IRK+ LVKAKRYLEDVLAHKQAIPF
Sbjct: 1   MVKYSREPDNPTKSCKARGADLRVHFKNTRETAFAIRKLPLVKAKRYLEDVLAHKQAIPF 60

Query: 280 RRFCRGVGRTAQVKDRHPNGQGRWPVKSAKFILDLLKNAESNADVKGLDVDSLYVSHVQV 459
           RRFC GVGRTAQ K+RH NGQGRWPVKSAKFILDLLKNAESNA+VKGLDVD+LY+SH+QV
Sbjct: 61  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQV 120

Query: 460 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSXXXXXXXXXXXTQLASRKTKASLRSGAS 639
           NQAQKQRRRTYRAHGRINPYMSSPCHIELILS           TQLA+ K K +LRSGAS
Sbjct: 121 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEAETQLATSKKKGALRSGAS 180

Query: 640 S 642
           S
Sbjct: 181 S 181


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