BLASTX nr result

ID: Cimicifuga21_contig00000679 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00000679
         (483 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32573.3| unnamed protein product [Vitis vinifera]              119   2e-25
ref|XP_003631642.1| PREDICTED: organ-specific protein S2-like [V...   119   2e-25
emb|CAN67243.1| hypothetical protein VITISV_017120 [Vitis vinifera]   115   5e-24
ref|XP_003631638.1| PREDICTED: organ-specific protein S2-like [V...   113   1e-23
ref|XP_002313801.1| predicted protein [Populus trichocarpa] gi|2...   101   5e-20

>emb|CBI32573.3| unnamed protein product [Vitis vinifera]
          Length = 180

 Score =  119 bits (299), Expect = 2e-25
 Identities = 58/95 (61%), Positives = 73/95 (76%), Gaps = 2/95 (2%)
 Frame = +1

Query: 76  PDCHTSVDTNNRKIS-FSGNAEVKGKTSFAEDFEPRPNVSVYHDDAKLKEENAFVKNFDP 252
           P+CHT+ + +N +      + E K + +FAEDFEPRPNVSVYHDD+K+ EE +FVK+F+P
Sbjct: 86  PNCHTATEASNEQADQLLKDFEQKVEKAFAEDFEPRPNVSVYHDDSKVGEEKSFVKDFEP 145

Query: 253 RPNVSVYHDD-AELKEEKSFVKDFEPRPNVSVYHD 354
            PNVSVYHDD    K +KSFV DFEPRPNVSVY+D
Sbjct: 146 GPNVSVYHDDEVASKGDKSFVNDFEPRPNVSVYND 180


>ref|XP_003631642.1| PREDICTED: organ-specific protein S2-like [Vitis vinifera]
          Length = 146

 Score =  119 bits (299), Expect = 2e-25
 Identities = 58/95 (61%), Positives = 73/95 (76%), Gaps = 2/95 (2%)
 Frame = +1

Query: 76  PDCHTSVDTNNRKIS-FSGNAEVKGKTSFAEDFEPRPNVSVYHDDAKLKEENAFVKNFDP 252
           P+CHT+ + +N +      + E K + +FAEDFEPRPNVSVYHDD+K+ EE +FVK+F+P
Sbjct: 52  PNCHTATEASNEQADQLLKDFEQKVEKAFAEDFEPRPNVSVYHDDSKVGEEKSFVKDFEP 111

Query: 253 RPNVSVYHDD-AELKEEKSFVKDFEPRPNVSVYHD 354
            PNVSVYHDD    K +KSFV DFEPRPNVSVY+D
Sbjct: 112 GPNVSVYHDDEVASKGDKSFVNDFEPRPNVSVYND 146


>emb|CAN67243.1| hypothetical protein VITISV_017120 [Vitis vinifera]
          Length = 146

 Score =  115 bits (287), Expect = 5e-24
 Identities = 55/94 (58%), Positives = 72/94 (76%), Gaps = 2/94 (2%)
 Frame = +1

Query: 76  PDCHTSVDTNNRKIS-FSGNAEVKGKTSFAEDFEPRPNVSVYHDDAKLKEENAFVKNFDP 252
           P+CHT+ + +N +      + E K + +FAEDFEPRPNVSVYHDD+K+ EE +FVK+F+P
Sbjct: 52  PNCHTATEASNEQADQLLKDFEQKVEKAFAEDFEPRPNVSVYHDDSKVGEEKSFVKDFEP 111

Query: 253 RPNVSVYHDD-AELKEEKSFVKDFEPRPNVSVYH 351
            PN+SVYHDD    K +KSFV DFEPRPN+SVY+
Sbjct: 112 GPNLSVYHDDEVASKGDKSFVNDFEPRPNLSVYN 145


>ref|XP_003631638.1| PREDICTED: organ-specific protein S2-like [Vitis vinifera]
          Length = 146

 Score =  113 bits (283), Expect = 1e-23
 Identities = 54/94 (57%), Positives = 71/94 (75%), Gaps = 2/94 (2%)
 Frame = +1

Query: 76  PDCHTSVDTNNRKIS-FSGNAEVKGKTSFAEDFEPRPNVSVYHDDAKLKEENAFVKNFDP 252
           P+CHT+ + +N +      + E K + +FAEDFEPRPNVS YHDD+K+ EE +FVK+F+P
Sbjct: 52  PNCHTATEASNEQADQLLKDFEQKVEKAFAEDFEPRPNVSAYHDDSKVGEEKSFVKDFEP 111

Query: 253 RPNVSVYHDD-AELKEEKSFVKDFEPRPNVSVYH 351
            PN+SVYHDD    K +KSFV DFEPRPN+SVY+
Sbjct: 112 GPNLSVYHDDEVASKGDKSFVNDFEPRPNLSVYN 145


>ref|XP_002313801.1| predicted protein [Populus trichocarpa] gi|222850209|gb|EEE87756.1|
           predicted protein [Populus trichocarpa]
          Length = 187

 Score =  101 bits (252), Expect = 5e-20
 Identities = 48/81 (59%), Positives = 60/81 (74%)
 Frame = +1

Query: 106 NRKISFSGNAEVKGKTSFAEDFEPRPNVSVYHDDAKLKEENAFVKNFDPRPNVSVYHDDA 285
           N ++    +  VKG+ SFAED EPRPNVSVYHDDA LK EN+F ++F+P PNVSVY D  
Sbjct: 105 NTQLFLYNDGVVKGERSFAEDLEPRPNVSVYHDDAALKGENSFPEDFEPGPNVSVYDDGV 164

Query: 286 ELKEEKSFVKDFEPRPNVSVY 348
            LK +KSF  +FEPRP+V+ Y
Sbjct: 165 GLKGKKSFSDEFEPRPSVTAY 185



 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 49/120 (40%), Positives = 64/120 (53%), Gaps = 11/120 (9%)
 Frame = +1

Query: 28  GLVVTNTESLPKEEIKPDCHTSVDTNNRKI-----------SFSGNAEVKGKTSFAEDFE 174
           GL+   T S    E K DCHT+                   S+    +     SF++DF 
Sbjct: 45  GLIRETTLSSVSNE-KADCHTTESNEKNNFVKDFGPQPTVTSYDNGIKPAKDKSFSKDFH 103

Query: 175 PRPNVSVYHDDAKLKEENAFVKNFDPRPNVSVYHDDAELKEEKSFVKDFEPRPNVSVYHD 354
           P   + +Y+D   +K E +F ++ +PRPNVSVYHDDA LK E SF +DFEP PNVSVY D
Sbjct: 104 PNTQLFLYNDGV-VKGERSFAEDLEPRPNVSVYHDDAALKGENSFPEDFEPGPNVSVYDD 162


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