BLASTX nr result

ID: Cimicifuga21_contig00000678 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00000678
         (279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32573.3| unnamed protein product [Vitis vinifera]               79   5e-13
ref|XP_003631642.1| PREDICTED: organ-specific protein S2-like [V...    79   5e-13
emb|CAN67243.1| hypothetical protein VITISV_017120 [Vitis vinifera]    79   5e-13
ref|XP_003631638.1| PREDICTED: organ-specific protein S2-like [V...    77   1e-12
ref|XP_002313801.1| predicted protein [Populus trichocarpa] gi|2...    72   6e-11

>emb|CBI32573.3| unnamed protein product [Vitis vinifera]
          Length = 180

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 42/93 (45%), Positives = 56/93 (60%), Gaps = 1/93 (1%)
 Frame = +3

Query: 3   INARKAPDEYWTEVMNGKPMLGGLVVTNTESLPKEEIKPDCHTSVDTNNRKRS-FSGNAE 179
           I ARK P EYW + M  +PM   +    +         P+CHT+ + +N +      + E
Sbjct: 54  IAARKDPGEYWKDAMKDQPMPKAIEGVLSAK------NPNCHTATEASNEQADQLLKDFE 107

Query: 180 VKGKTSFAEDFEPRPNVSVYHDDAKLKEEKSFV 278
            K + +FAEDFEPRPNVSVYHDD+K+ EEKSFV
Sbjct: 108 QKVEKAFAEDFEPRPNVSVYHDDSKVGEEKSFV 140


>ref|XP_003631642.1| PREDICTED: organ-specific protein S2-like [Vitis vinifera]
          Length = 146

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 42/93 (45%), Positives = 56/93 (60%), Gaps = 1/93 (1%)
 Frame = +3

Query: 3   INARKAPDEYWTEVMNGKPMLGGLVVTNTESLPKEEIKPDCHTSVDTNNRKRS-FSGNAE 179
           I ARK P EYW + M  +PM   +    +         P+CHT+ + +N +      + E
Sbjct: 20  IAARKDPGEYWKDAMKDQPMPKAIEGVLSAK------NPNCHTATEASNEQADQLLKDFE 73

Query: 180 VKGKTSFAEDFEPRPNVSVYHDDAKLKEEKSFV 278
            K + +FAEDFEPRPNVSVYHDD+K+ EEKSFV
Sbjct: 74  QKVEKAFAEDFEPRPNVSVYHDDSKVGEEKSFV 106


>emb|CAN67243.1| hypothetical protein VITISV_017120 [Vitis vinifera]
          Length = 146

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 42/93 (45%), Positives = 56/93 (60%), Gaps = 1/93 (1%)
 Frame = +3

Query: 3   INARKAPDEYWTEVMNGKPMLGGLVVTNTESLPKEEIKPDCHTSVDTNNRKRS-FSGNAE 179
           I ARK P EYW + M  +PM   +    +         P+CHT+ + +N +      + E
Sbjct: 20  IAARKDPGEYWKDAMKDQPMPKAIEGVLSAK------NPNCHTATEASNEQADQLLKDFE 73

Query: 180 VKGKTSFAEDFEPRPNVSVYHDDAKLKEEKSFV 278
            K + +FAEDFEPRPNVSVYHDD+K+ EEKSFV
Sbjct: 74  QKVEKAFAEDFEPRPNVSVYHDDSKVGEEKSFV 106


>ref|XP_003631638.1| PREDICTED: organ-specific protein S2-like [Vitis vinifera]
          Length = 146

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 41/93 (44%), Positives = 55/93 (59%), Gaps = 1/93 (1%)
 Frame = +3

Query: 3   INARKAPDEYWTEVMNGKPMLGGLVVTNTESLPKEEIKPDCHTSVDTNNRKRS-FSGNAE 179
           I ARK P EYW + M  +PM   +    +         P+CHT+ + +N +      + E
Sbjct: 20  IAARKDPGEYWKDAMKDQPMPKAIEGVLSAK------NPNCHTATEASNEQADQLLKDFE 73

Query: 180 VKGKTSFAEDFEPRPNVSVYHDDAKLKEEKSFV 278
            K + +FAEDFEPRPNVS YHDD+K+ EEKSFV
Sbjct: 74  QKVEKAFAEDFEPRPNVSAYHDDSKVGEEKSFV 106


>ref|XP_002313801.1| predicted protein [Populus trichocarpa] gi|222850209|gb|EEE87756.1|
           predicted protein [Populus trichocarpa]
          Length = 187

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 53/129 (41%), Positives = 61/129 (47%), Gaps = 38/129 (29%)
 Frame = +3

Query: 3   INARKAPDEYWTEVMNGKPM---LGGLVVTNTESLPKEEIKPDCHT--SVDTNN------ 149
           I ARK   EYW  VM  +PM   + GL+   T S    E K DCHT  S + NN      
Sbjct: 20  IGARKDTGEYWRAVMKDQPMPEAIHGLIRETTLSSVSNE-KADCHTTESNEKNNFVKDFG 78

Query: 150 ---------------RKRSFS------------GNAEVKGKTSFAEDFEPRPNVSVYHDD 248
                          + +SFS             +  VKG+ SFAED EPRPNVSVYHDD
Sbjct: 79  PQPTVTSYDNGIKPAKDKSFSKDFHPNTQLFLYNDGVVKGERSFAEDLEPRPNVSVYHDD 138

Query: 249 AKLKEEKSF 275
           A LK E SF
Sbjct: 139 AALKGENSF 147


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