BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00000646
         (722 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN60667.1| hypothetical protein VITISV_028261 [Vitis vinifera]   297   2e-78
ref|XP_002267684.1| PREDICTED: pentatricopeptide repeat-containi...   296   3e-78
ref|XP_002298921.1| predicted protein [Populus trichocarpa] gi|2...   289   5e-76
ref|XP_004146072.1| PREDICTED: pentatricopeptide repeat-containi...   283   3e-74
ref|XP_002521673.1| pentatricopeptide repeat-containing protein,...   271   1e-70

>emb|CAN60667.1| hypothetical protein VITISV_028261 [Vitis vinifera]
          Length = 393

 Score =  297 bits (760), Expect = 2e-78
 Identities = 145/223 (65%), Positives = 179/223 (80%), Gaps = 1/223 (0%)
 Frame = +2

Query: 2   LSDDFFYSVIKSYGN-AGYIDRAIETLFSMTQYHCWPTIRTFNFVLNMLVSSKQFDIIHE 178
           LSD FFY+VIK YGN AG  DRA+ETLF M ++HCWP+++TFN VLNMLVS+K+FD++H+
Sbjct: 119 LSDVFFYNVIKVYGNVAGRPDRAVETLFDMPKFHCWPSVKTFNLVLNMLVSAKRFDVVHK 178

Query: 179 VYLGAARLGLEIDTCCLNILIKGLCVSEKLDAAFELLDEYPKLHCNPNVRTYSTLMSCLC 358
           VY GA  LG+EID CCLNIL+KGLC S  +DAA ELLDEYPK  C PNVRT+STLM  LC
Sbjct: 179 VYAGAPELGVEIDACCLNILVKGLCRSGNVDAACELLDEYPKQRCRPNVRTFSTLMHGLC 238

Query: 359 KHGRVDEALKLCERMEQAGVDPDTITFNMLISGLCKQGRVADGMELLDKMRFKGCDPDGG 538
           + GRV+ AL L ERME+ GV PDT+ FN+LISGL K+GRV +GMELL +M+ KGC P+ G
Sbjct: 239 ESGRVEGALGLLERMEREGVYPDTVVFNILISGLRKRGRVEEGMELLGRMKLKGCYPNAG 298

Query: 539 SYQAVLYGLLDSKKFVESKCLMDKMISMGVLPSFSSYKLVIHG 667
           SYQ VLYG+LD+ +F ++K  M +MI  GV PSF SYK+VI+G
Sbjct: 299 SYQEVLYGVLDTGRFGKAKEFMCQMIDEGVSPSFVSYKMVIYG 341


>ref|XP_002267684.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
           mitochondrial-like [Vitis vinifera]
          Length = 393

 Score =  296 bits (758), Expect = 3e-78
 Identities = 144/223 (64%), Positives = 179/223 (80%), Gaps = 1/223 (0%)
 Frame = +2

Query: 2   LSDDFFYSVIKSYGN-AGYIDRAIETLFSMTQYHCWPTIRTFNFVLNMLVSSKQFDIIHE 178
           LSD FFY+VIK YGN AG  DRA+ETLF M ++HCWP+++TFN VLNMLVS+K+FD++H+
Sbjct: 119 LSDVFFYNVIKVYGNVAGQPDRAVETLFDMPKFHCWPSVKTFNLVLNMLVSAKRFDVVHK 178

Query: 179 VYLGAARLGLEIDTCCLNILIKGLCVSEKLDAAFELLDEYPKLHCNPNVRTYSTLMSCLC 358
           VY GA  LG+EID CCLNIL+KGLC S  +DAA ELLDEYPK  C PNVRT+STLM  LC
Sbjct: 179 VYAGAPELGVEIDACCLNILVKGLCRSGNVDAACELLDEYPKQRCRPNVRTFSTLMHGLC 238

Query: 359 KHGRVDEALKLCERMEQAGVDPDTITFNMLISGLCKQGRVADGMELLDKMRFKGCDPDGG 538
           + GRV+ AL L ERME+ GV PDT+ FN+LISGL K+GRV +GMELL +M+ KGC P+ G
Sbjct: 239 ESGRVEGALGLLERMEREGVYPDTVVFNILISGLRKRGRVEEGMELLGRMKLKGCYPNAG 298

Query: 539 SYQAVLYGLLDSKKFVESKCLMDKMISMGVLPSFSSYKLVIHG 667
           SYQ VLYG+LD+ +F ++K  M +MI  GV PSF SYK++I+G
Sbjct: 299 SYQEVLYGVLDTGRFGKAKEFMCQMIDEGVSPSFVSYKMMIYG 341


>ref|XP_002298921.1| predicted protein [Populus trichocarpa] gi|222846179|gb|EEE83726.1|
           predicted protein [Populus trichocarpa]
          Length = 326

 Score =  289 bits (739), Expect = 5e-76
 Identities = 140/224 (62%), Positives = 178/224 (79%), Gaps = 2/224 (0%)
 Frame = +2

Query: 2   LSDDFFYSVIKSYGN-AGYIDRAIETLFSMTQ-YHCWPTIRTFNFVLNMLVSSKQFDIIH 175
           LS+DFF++VIK YG  AG I +A+ETLF M + Y+CWP +++FN VLN+LVS+K FD++H
Sbjct: 77  LSNDFFHNVIKIYGQLAGRIKKAMETLFDMPKGYNCWPNVKSFNLVLNLLVSAKVFDVVH 136

Query: 176 EVYLGAARLGLEIDTCCLNILIKGLCVSEKLDAAFELLDEYPKLHCNPNVRTYSTLMSCL 355
           EVYL A  LG+EID C LNILIKGLC +  L+AAF +LDE+PK  C PNVRT+STLM  L
Sbjct: 137 EVYLQAPMLGIEIDVCSLNILIKGLCENGDLEAAFNVLDEFPKQRCEPNVRTFSTLMHGL 196

Query: 356 CKHGRVDEALKLCERMEQAGVDPDTITFNMLISGLCKQGRVADGMELLDKMRFKGCDPDG 535
           CK G+VDEA  L ERME+ G+D DTITFN+LISGL KQG+V +G+ELL++M  KGC+P+ 
Sbjct: 197 CKKGKVDEAFGLLERMEKEGIDADTITFNILISGLRKQGKVVEGLELLERMNIKGCEPNA 256

Query: 536 GSYQAVLYGLLDSKKFVESKCLMDKMISMGVLPSFSSYKLVIHG 667
           GSYQ +LYGLLD++K+VE K  M +MI  GV PSF SYK ++HG
Sbjct: 257 GSYQEILYGLLDAEKYVEGKEFMVRMIGQGVDPSFVSYKKLVHG 300


>ref|XP_004146072.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
           mitochondrial-like [Cucumis sativus]
           gi|449503658|ref|XP_004162112.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g14580,
           mitochondrial-like [Cucumis sativus]
          Length = 411

 Score =  283 bits (723), Expect = 3e-74
 Identities = 133/223 (59%), Positives = 178/223 (79%), Gaps = 1/223 (0%)
 Frame = +2

Query: 2   LSDDFFYSVIKSYGN-AGYIDRAIETLFSMTQYHCWPTIRTFNFVLNMLVSSKQFDIIHE 178
           LSD+FFY VIK YGN AG +++AI+TLF M  Y+CWP+++TFNFVLN+LVS+K FD++HE
Sbjct: 125 LSDEFFYHVIKIYGNVAGRLNKAIDTLFDMPNYNCWPSVKTFNFVLNLLVSAKMFDVVHE 184

Query: 179 VYLGAARLGLEIDTCCLNILIKGLCVSEKLDAAFELLDEYPKLHCNPNVRTYSTLMSCLC 358
           VY+GA +LG+EID CCLNIL+KGLC S  LDAA ++LDE+P+  C PNVRT+STL+  LC
Sbjct: 185 VYMGAPKLGIEIDACCLNILVKGLCQSGNLDAALKVLDEFPQQRCRPNVRTFSTLLHGLC 244

Query: 359 KHGRVDEALKLCERMEQAGVDPDTITFNMLISGLCKQGRVADGMELLDKMRFKGCDPDGG 538
           ++G +  AL+L  +ME  GV PDTITFN+LISGL K+ R+ + +ELL +M+ KGC P+ G
Sbjct: 245 ENGELGRALELFCKMENEGVCPDTITFNILISGLRKKKRIEEAIELLGRMKLKGCYPNAG 304

Query: 539 SYQAVLYGLLDSKKFVESKCLMDKMISMGVLPSFSSYKLVIHG 667
           +YQ VLYGLLD+ KF+E++  M +MIS G+ PSF SYK ++ G
Sbjct: 305 TYQEVLYGLLDTGKFIEARDCMHRMISEGMDPSFVSYKKLLSG 347


>ref|XP_002521673.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539064|gb|EEF40660.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 341

 Score =  271 bits (692), Expect = 1e-70
 Identities = 135/224 (60%), Positives = 172/224 (76%), Gaps = 2/224 (0%)
 Frame = +2

Query: 2   LSDDFFYSVIKSYGN-AGYIDRAIETLFSMTQ-YHCWPTIRTFNFVLNMLVSSKQFDIIH 175
           LS+ FFY+VIK YG+ AG I  AI+TLF M + Y+CWP ++TFN VLN+LVS++ FD++H
Sbjct: 64  LSNGFFYNVIKIYGHLAGRIKVAIDTLFDMPRGYNCWPDVKTFNLVLNLLVSARIFDVVH 123

Query: 176 EVYLGAARLGLEIDTCCLNILIKGLCVSEKLDAAFELLDEYPKLHCNPNVRTYSTLMSCL 355
           E+Y  A  LG+EID CCLNILIKGLC +  L+AAF +LDE+PK  C PNVRT+STLM  L
Sbjct: 124 EIYEKAPILGVEIDACCLNILIKGLCENGDLEAAFYVLDEFPKQRCKPNVRTFSTLMHYL 183

Query: 356 CKHGRVDEALKLCERMEQAGVDPDTITFNMLISGLCKQGRVADGMELLDKMRFKGCDPDG 535
           C  G V++A  L +RME  G++ DTITFN+LISGL K+GR+ +GMELL KM+ KGC+P+ 
Sbjct: 184 CAKGEVNQAFGLLDRMENEGIEVDTITFNILISGLRKRGRIEEGMELLVKMKLKGCEPNA 243

Query: 536 GSYQAVLYGLLDSKKFVESKCLMDKMISMGVLPSFSSYKLVIHG 667
           GSYQ VLYGLLD+ KF E+K  MD+M+  G  PSF SYK +I G
Sbjct: 244 GSYQEVLYGLLDAGKFSEAKDFMDRMVCEGNGPSFVSYKKLIDG 287