BLASTX nr result

ID: Cimicifuga21_contig00000643 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00000643
         (1011 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACU16800.1| unknown [Glycine max]                                  313   5e-83
ref|XP_002529032.1| 40S ribosomal protein S8, putative [Ricinus ...   311   1e-82
ref|XP_003547779.1| PREDICTED: 40S ribosomal protein S8 [Glycine...   309   8e-82
ref|XP_002269042.2| PREDICTED: 40S ribosomal protein S8-like [Vi...   309   8e-82
ref|NP_001240243.1| uncharacterized protein LOC100813170 [Glycin...   308   1e-81

>gb|ACU16800.1| unknown [Glycine max]
          Length = 243

 Score =  313 bits (801), Expect = 5e-83
 Identities = 164/236 (69%), Positives = 174/236 (73%), Gaps = 2/236 (0%)
 Frame = +2

Query: 104 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 283
           MGISRDSMH                 YELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWGKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 284 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGH 463
           LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYG 
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 464 DIGR--XXXXXXXXXXXXXXXXXXXXXXXSNHLLRKIEKRQEDHKLDSHIEEQFGGGRLL 637
           +IGR                         SNHL RK+EKRQ+D KLD+HIEEQFGGGRLL
Sbjct: 121 EIGRKKKTAAKKETAEEGAAAVAVEEAKKSNHLQRKLEKRQKDRKLDAHIEEQFGGGRLL 180

Query: 638 ACISSRPGQCGRADGYILEGKELEFYQKKIQRXXXXXXXXXXNFLCFSFCYSIFFL 805
           ACISSRPGQCGRADGYILEGKELEFY KK+Q+           F  F + +S F++
Sbjct: 181 ACISSRPGQCGRADGYILEGKELEFYMKKLQKKKGKGCCLILVFPIFLYGFSCFYM 236


>ref|XP_002529032.1| 40S ribosomal protein S8, putative [Ricinus communis]
           gi|223531512|gb|EEF33343.1| 40S ribosomal protein S8,
           putative [Ricinus communis]
          Length = 219

 Score =  311 bits (798), Expect = 1e-82
 Identities = 159/210 (75%), Positives = 165/210 (78%)
 Frame = +2

Query: 104 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 283
           MGISRDSMH                 YELGRQPA+TKLSSNKTVRRIRVRGGNVKWRALR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPASTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 284 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGH 463
           LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAI+QVDAAPFKQWYLQHYG 
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIIQVDAAPFKQWYLQHYGV 120

Query: 464 DIGRXXXXXXXXXXXXXXXXXXXXXXXSNHLLRKIEKRQEDHKLDSHIEEQFGGGRLLAC 643
           DIGR                       SNH+LRK+EKRQ+  KLD HIEEQFGGGRLLAC
Sbjct: 121 DIGRKKKTAAAKKEGEEGEAATEEVKKSNHVLRKLEKRQQIRKLDPHIEEQFGGGRLLAC 180

Query: 644 ISSRPGQCGRADGYILEGKELEFYQKKIQR 733
           ISSRPGQCGRADGYILEGKELEFY KK+QR
Sbjct: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQR 210


>ref|XP_003547779.1| PREDICTED: 40S ribosomal protein S8 [Glycine max]
          Length = 219

 Score =  309 bits (791), Expect = 8e-82
 Identities = 160/212 (75%), Positives = 166/212 (78%), Gaps = 2/212 (0%)
 Frame = +2

Query: 104 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 283
           MGISRDSMH                 YELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 284 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGH 463
           LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYG 
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 464 DIGR--XXXXXXXXXXXXXXXXXXXXXXXSNHLLRKIEKRQEDHKLDSHIEEQFGGGRLL 637
           +IGR                         SNHL RK+EKRQ+D KLD+HIEEQFGGGRLL
Sbjct: 121 EIGRKKKTAAKKETAEEGAAAVAVEEAKKSNHLQRKLEKRQKDRKLDAHIEEQFGGGRLL 180

Query: 638 ACISSRPGQCGRADGYILEGKELEFYQKKIQR 733
           ACISSRPGQCGRADGYILEGKELEFY KK+Q+
Sbjct: 181 ACISSRPGQCGRADGYILEGKELEFYMKKLQK 212


>ref|XP_002269042.2| PREDICTED: 40S ribosomal protein S8-like [Vitis vinifera]
           gi|147772691|emb|CAN64937.1| hypothetical protein
           VITISV_011515 [Vitis vinifera]
          Length = 221

 Score =  309 bits (791), Expect = 8e-82
 Identities = 160/211 (75%), Positives = 165/211 (78%), Gaps = 1/211 (0%)
 Frame = +2

Query: 104 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 283
           MGISRDSMH                 YELGRQPANTKLSSNKTVRR+RVRGGNVKWRALR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALR 60

Query: 284 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGH 463
           LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYG 
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 464 DIGR-XXXXXXXXXXXXXXXXXXXXXXXSNHLLRKIEKRQEDHKLDSHIEEQFGGGRLLA 640
           DIGR                        SNH+LRK+EKRQ+DH+LD HIEEQFG GRLLA
Sbjct: 121 DIGRKKKTTAKKETTEEGEGGATEETKKSNHVLRKLEKRQQDHRLDPHIEEQFGSGRLLA 180

Query: 641 CISSRPGQCGRADGYILEGKELEFYQKKIQR 733
            ISSRPGQCGRADGYILEGKELEFY KKIQR
Sbjct: 181 SISSRPGQCGRADGYILEGKELEFYMKKIQR 211


>ref|NP_001240243.1| uncharacterized protein LOC100813170 [Glycine max]
           gi|255636051|gb|ACU18370.1| unknown [Glycine max]
          Length = 217

 Score =  308 bits (790), Expect = 1e-81
 Identities = 157/210 (74%), Positives = 164/210 (78%)
 Frame = +2

Query: 104 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 283
           MGISRDSMH                 YELGRQ ANTKLSSNKT+RRIRVRGGNVKWRALR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQAANTKLSSNKTIRRIRVRGGNVKWRALR 60

Query: 284 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGH 463
           LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPF+QWYLQHYG 
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQWYLQHYGV 120

Query: 464 DIGRXXXXXXXXXXXXXXXXXXXXXXXSNHLLRKIEKRQEDHKLDSHIEEQFGGGRLLAC 643
           +IGR                       SNH+ RK+EKRQ+D  LDSHIEEQFGGGRLLAC
Sbjct: 121 EIGRKKKVAAKKDSTEEGEAAAEETKKSNHVQRKLEKRQKDRNLDSHIEEQFGGGRLLAC 180

Query: 644 ISSRPGQCGRADGYILEGKELEFYQKKIQR 733
           ISSRPGQCGRADGYILEGKELEFY KK+QR
Sbjct: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQR 210