BLASTX nr result

ID: Cimicifuga21_contig00000600 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00000600
         (959 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004154636.1| PREDICTED: 60S ribosomal protein L13a-4-like...   372   e-101
ref|XP_004154637.1| PREDICTED: 60S ribosomal protein L13a-4-like...   370   e-100
ref|XP_004138959.1| PREDICTED: 60S ribosomal protein L13a-4-like...   370   e-100
ref|XP_004133995.1| PREDICTED: 60S ribosomal protein L13a-2-like...   370   e-100
ref|XP_002518107.1| 60S ribosomal protein L13a, putative [Ricinu...   369   e-100

>ref|XP_004154636.1| PREDICTED: 60S ribosomal protein L13a-4-like isoform 1 [Cucumis
           sativus]
          Length = 241

 Score =  372 bits (954), Expect = e-101
 Identities = 181/214 (84%), Positives = 194/214 (90%)
 Frame = +2

Query: 35  ITYGRKTTMVSGSGICARRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEIALSGGL 214
           ++  R   MVSGSGICA+RVVVDARHHMLGRL+SIIAKELLNGQKVVVVRCEEI +SGGL
Sbjct: 26  LSKNRNKKMVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGL 85

Query: 215 VRQKMKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARFKAYEG 394
           VRQKMKY+RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALAR KAYEG
Sbjct: 86  VRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEG 145

Query: 395 VPPPYDKVKRMVIPDALKVLRLQPGHKYCLLGRLSSEVGWNHYDTIKELEKKRKERAQVA 574
           VPPPYDK+KRMVIPDALKVLRLQ GHKYCLLGRLSSEVGWNHYDTIKELE+KRKER+Q A
Sbjct: 146 VPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAA 205

Query: 575 YERKKQLTKLRXXXXXXXXXQLGPHLEILAPVKY 676
           YERKKQL KLR         +LGP LE++AP+KY
Sbjct: 206 YERKKQLNKLRIKAEKVAEEKLGPQLEVIAPIKY 239


>ref|XP_004154637.1| PREDICTED: 60S ribosomal protein L13a-4-like isoform 2 [Cucumis
           sativus] gi|449476094|ref|XP_004154638.1| PREDICTED: 60S
           ribosomal protein L13a-4-like isoform 3 [Cucumis
           sativus]
          Length = 208

 Score =  370 bits (950), Expect = e-100
 Identities = 180/206 (87%), Positives = 191/206 (92%)
 Frame = +2

Query: 59  MVSGSGICARRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEIALSGGLVRQKMKYL 238
           MVSGSGICA+RVVVDARHHMLGRL+SIIAKELLNGQKVVVVRCEEI +SGGLVRQKMKY+
Sbjct: 1   MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60

Query: 239 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARFKAYEGVPPPYDKV 418
           RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALAR KAYEGVPPPYDK+
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120

Query: 419 KRMVIPDALKVLRLQPGHKYCLLGRLSSEVGWNHYDTIKELEKKRKERAQVAYERKKQLT 598
           KRMVIPDALKVLRLQ GHKYCLLGRLSSEVGWNHYDTIKELE+KRKER+Q AYERKKQL 
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYERKKQLN 180

Query: 599 KLRXXXXXXXXXQLGPHLEILAPVKY 676
           KLR         +LGP LE++AP+KY
Sbjct: 181 KLRIKAEKVAEEKLGPQLEVIAPIKY 206


>ref|XP_004138959.1| PREDICTED: 60S ribosomal protein L13a-4-like [Cucumis sativus]
           gi|449442541|ref|XP_004139040.1| PREDICTED: 60S
           ribosomal protein L13a-4-like [Cucumis sativus]
          Length = 206

 Score =  370 bits (950), Expect = e-100
 Identities = 180/206 (87%), Positives = 191/206 (92%)
 Frame = +2

Query: 59  MVSGSGICARRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEIALSGGLVRQKMKYL 238
           MVSGSGICA+RVVVDARHHMLGRL+SIIAKELLNGQKVVVVRCEEI +SGGLVRQKMKY+
Sbjct: 1   MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60

Query: 239 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARFKAYEGVPPPYDKV 418
           RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALAR KAYEGVPPPYDK+
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120

Query: 419 KRMVIPDALKVLRLQPGHKYCLLGRLSSEVGWNHYDTIKELEKKRKERAQVAYERKKQLT 598
           KRMVIPDALKVLRLQ GHKYCLLGRLSSEVGWNHYDTIKELE+KRKER+Q AYERKKQL 
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYERKKQLN 180

Query: 599 KLRXXXXXXXXXQLGPHLEILAPVKY 676
           KLR         +LGP LE++AP+KY
Sbjct: 181 KLRIKAEKVAEEKLGPQLEVIAPIKY 206


>ref|XP_004133995.1| PREDICTED: 60S ribosomal protein L13a-2-like [Cucumis sativus]
           gi|449525004|ref|XP_004169511.1| PREDICTED: 60S
           ribosomal protein L13a-2-like [Cucumis sativus]
          Length = 206

 Score =  370 bits (949), Expect = e-100
 Identities = 179/206 (86%), Positives = 192/206 (93%)
 Frame = +2

Query: 59  MVSGSGICARRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEIALSGGLVRQKMKYL 238
           MVSGSGICA+RVVVDARHHMLGRL+SIIAKELLNGQKVVVVRCEEI +SGGLVRQKMKY+
Sbjct: 1   MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60

Query: 239 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARFKAYEGVPPPYDKV 418
           RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALAR KAYEGVPPPYDK+
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120

Query: 419 KRMVIPDALKVLRLQPGHKYCLLGRLSSEVGWNHYDTIKELEKKRKERAQVAYERKKQLT 598
           KRMVIPDALKVLRLQ GHKYCLLGRLSSEVGWNHYDTIKELE+KRKER+Q AYE+KKQLT
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYEKKKQLT 180

Query: 599 KLRXXXXXXXXXQLGPHLEILAPVKY 676
           KLR         +LGP L+++AP+KY
Sbjct: 181 KLRVKAEKVADEKLGPQLQVIAPIKY 206


>ref|XP_002518107.1| 60S ribosomal protein L13a, putative [Ricinus communis]
           gi|223542703|gb|EEF44240.1| 60S ribosomal protein L13a,
           putative [Ricinus communis]
          Length = 206

 Score =  369 bits (946), Expect = e-100
 Identities = 179/206 (86%), Positives = 191/206 (92%)
 Frame = +2

Query: 59  MVSGSGICARRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEIALSGGLVRQKMKYL 238
           MVSGSGICA+RVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEI +SGGLVRQKMKY+
Sbjct: 1   MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60

Query: 239 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARFKAYEGVPPPYDKV 418
           RFLRKRMNTKPSHGPIHFRAP+KILWRTIRGMIPHKTKRG AALAR K YEGVPPPYDK+
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKILWRTIRGMIPHKTKRGEAALARLKVYEGVPPPYDKM 120

Query: 419 KRMVIPDALKVLRLQPGHKYCLLGRLSSEVGWNHYDTIKELEKKRKERAQVAYERKKQLT 598
           KRMVIPDALKVLRLQ GHKYCLLGRLSSEVGWNHY+TIKELE+KRKERAQVAYERKKQLT
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYETIKELERKRKERAQVAYERKKQLT 180

Query: 599 KLRXXXXXXXXXQLGPHLEILAPVKY 676
           KLR         +LGP L+++AP+KY
Sbjct: 181 KLRVKAEKIAEEKLGPQLDVIAPIKY 206


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