BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00000594
         (588 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004171466.1| PREDICTED: mediator of RNA polymerase II tra...   100   2e-19
ref|XP_002530460.1| transcription cofactor, putative [Ricinus co...    95   8e-18
ref|XP_003634891.1| PREDICTED: uncharacterized protein LOC100853...    95   1e-17
emb|CBI40659.3| unnamed protein product [Vitis vinifera]               95   1e-17
ref|XP_002444549.1| hypothetical protein SORBIDRAFT_07g023620 [S...    95   1e-17

>ref|XP_004171466.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           15a-like, partial [Cucumis sativus]
          Length = 589

 Score =  100 bits (248), Expect = 2e-19
 Identities = 58/108 (53%), Positives = 69/108 (63%), Gaps = 6/108 (5%)
 Frame = -3

Query: 538 RPYHAEPDVVETPDWRTQLQSDSRRRIINKVMETLKR------PEGLLQLEKIATTLEEK 377
           RP  A    +ET DWR+QLQ DSR+RI+NK+METLKR       EGL +L KIA   EEK
Sbjct: 7   RPTQAVEPGMETVDWRSQLQPDSRQRIVNKIMETLKRHLPVSGQEGLSELRKIAVRFEEK 66

Query: 376 IYVDATSLTDYLRKISRKVLTMESNSRYTNTGEGTSLSSNPVVSDQNP 233
           I+  ATS +DYLRKIS K+LTME+    T    G  L SNP+V    P
Sbjct: 67  IFTAATSQSDYLRKISLKMLTMETK---TQPPMGNPLPSNPMVPGNKP 111


>ref|XP_002530460.1| transcription cofactor, putative [Ricinus communis]
           gi|223530005|gb|EEF31930.1| transcription cofactor,
           putative [Ricinus communis]
          Length = 1382

 Score = 95.1 bits (235), Expect = 8e-18
 Identities = 54/100 (54%), Positives = 66/100 (66%), Gaps = 6/100 (6%)
 Frame = -3

Query: 511 VETPDWRTQLQSDSRRRIINKVMETLKR------PEGLLQLEKIATTLEEKIYVDATSLT 350
           V+T DWR  LQ DSR+RI+NK+METLKR       EGL +L+KIA   EEKIY  ATS +
Sbjct: 17  VDTGDWRATLQPDSRQRIVNKIMETLKRHLPFSGQEGLEELKKIAVRFEEKIYTAATSQS 76

Query: 349 DYLRKISRKVLTMESNSRYTNTGEGTSLSSNPVVSDQNPP 230
           DYLRKIS K+LTMES S+        S+  NP  ++  PP
Sbjct: 77  DYLRKISLKMLTMESKSQ---NNVPNSVPPNPFGNNNRPP 113


>ref|XP_003634891.1| PREDICTED: uncharacterized protein LOC100853144 [Vitis vinifera]
          Length = 170

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 53/96 (55%), Positives = 66/96 (68%), Gaps = 6/96 (6%)
 Frame = -3

Query: 499 DWRTQLQSDSRRRIINKVMETLKR------PEGLLQLEKIATTLEEKIYVDATSLTDYLR 338
           DWRTQL  DSR+RI+NK+M+TLKR       EGL +L KIA   EEKIY  ATS +DYLR
Sbjct: 5   DWRTQLPPDSRQRIVNKIMDTLKRHLPVSGQEGLHELRKIAVRFEEKIYTAATSQSDYLR 64

Query: 337 KISRKVLTMESNSRYTNTGEGTSLSSNPVVSDQNPP 230
           KIS K+LTME+ S+   T   ++L SN   + +NPP
Sbjct: 65  KISLKMLTMETKSQ---TAMPSNLPSNSAGNSKNPP 97


>emb|CBI40659.3| unnamed protein product [Vitis vinifera]
          Length = 114

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 53/96 (55%), Positives = 66/96 (68%), Gaps = 6/96 (6%)
 Frame = -3

Query: 499 DWRTQLQSDSRRRIINKVMETLKR------PEGLLQLEKIATTLEEKIYVDATSLTDYLR 338
           DWRTQL  DSR+RI+NK+M+TLKR       EGL +L KIA   EEKIY  ATS +DYLR
Sbjct: 5   DWRTQLPPDSRQRIVNKIMDTLKRHLPVSGQEGLHELRKIAVRFEEKIYTAATSQSDYLR 64

Query: 337 KISRKVLTMESNSRYTNTGEGTSLSSNPVVSDQNPP 230
           KIS K+LTME+ S+   T   ++L SN   + +NPP
Sbjct: 65  KISLKMLTMETKSQ---TAMPSNLPSNSAGNSKNPP 97


>ref|XP_002444549.1| hypothetical protein SORBIDRAFT_07g023620 [Sorghum bicolor]
           gi|241940899|gb|EES14044.1| hypothetical protein
           SORBIDRAFT_07g023620 [Sorghum bicolor]
          Length = 303

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 53/96 (55%), Positives = 66/96 (68%), Gaps = 6/96 (6%)
 Frame = -3

Query: 499 DWRTQLQSDSRRRIINKVMETLKR------PEGLLQLEKIATTLEEKIYVDATSLTDYLR 338
           DWRTQLQ ++R RI+NK+METLK+      PEGL +L KIA   EEKIY  ATS +DYLR
Sbjct: 35  DWRTQLQPEARHRIVNKIMETLKKHLPVSVPEGLTELHKIAVRFEEKIYTAATSQSDYLR 94

Query: 337 KISRKVLTMESNSRYTNTGEGTSLSSNPVVSDQNPP 230
           KIS K+L+MES ++ T    G    S  V+ +QNPP
Sbjct: 95  KISLKMLSMESQTK-TQQNAG----SAQVIPNQNPP 125