BLASTX nr result

ID: Cimicifuga21_contig00000590 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00000590
         (1168 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ40867.1| transcriptional factor MYB-1 [Coptis japonica]        353   5e-95
ref|XP_002283347.1| PREDICTED: transcription factor MYB44 [Vitis...   344   3e-92
gb|AAY28930.1| sucrose responsive element binding protein [Vitis...   341   2e-91
ref|XP_002285015.1| PREDICTED: transcription factor MYB44-like [...   334   2e-89
emb|CAN81361.1| hypothetical protein VITISV_028904 [Vitis vinifera]   327   5e-87

>dbj|BAJ40867.1| transcriptional factor MYB-1 [Coptis japonica]
          Length = 312

 Score =  353 bits (906), Expect = 5e-95
 Identities = 199/308 (64%), Positives = 219/308 (71%), Gaps = 19/308 (6%)
 Frame = +3

Query: 117 DLDRIKGPWSPEEDDMLQSLVHRHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPQVEHRA 296
           DLDRIKGPWSPEEDD+L  LVH+HGPRNWSLISKSIPGRSGKSCRLRWCNQLSPQVEHRA
Sbjct: 10  DLDRIKGPWSPEEDDLLTKLVHKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPQVEHRA 69

Query: 297 FTPEEDDTIMRAHAKFGNKWATIARLLSGRTDNAIKNHWNSTLKRKCSSDD---GDLNRP 467
           F+ EEDDTI+RAHAKFGNKWATIARLL+GRTDNAIKNHWNSTLKRK S +D     L RP
Sbjct: 70  FSSEEDDTIIRAHAKFGNKWATIARLLNGRTDNAIKNHWNSTLKRKASGEDIFIDGLTRP 129

Query: 468 FKRSASVGTVPTXXXXXXXXXXXXXXXXXXXXXXXXIMSSSHVFRPVARTGGILPPSHQL 647
           FKRSASVG V                            SS HV+RPVARTGGIL    Q+
Sbjct: 130 FKRSASVGAVAPYGSGLYLSPSSPCGSDVSDSSLPG-SSSGHVYRPVARTGGIL----QI 184

Query: 648 ETSSSTNDPPTSLSLSLPGADSFEDHSK----PSDQHQQSPLPMRQF--------SPIFS 791
           ETSSSTNDPPTSLSLSLPG DS E  ++     S     S LPM+QF        + + S
Sbjct: 185 ETSSSTNDPPTSLSLSLPGTDSCEVSNQAMKTQSVDQIPSALPMQQFPLLQQNSSNMVSS 244

Query: 792 DFAEKQQPFKAAATAFSPEFLSLMQEMIKKEVKNYMS--EQNGACL--QAVDGIRNAVVK 959
           D +         + AFS EFL++MQEMIKKEV+NYMS  EQNG     QAVDGIRNA+VK
Sbjct: 245 DISVSPIEKPVVSKAFSAEFLAVMQEMIKKEVRNYMSAMEQNGGMCSSQAVDGIRNALVK 304

Query: 960 RIGISKIE 983
           RIGI+KIE
Sbjct: 305 RIGITKIE 312


>ref|XP_002283347.1| PREDICTED: transcription factor MYB44 [Vitis vinifera]
          Length = 312

 Score =  344 bits (882), Expect = 3e-92
 Identities = 191/313 (61%), Positives = 213/313 (68%), Gaps = 24/313 (7%)
 Frame = +3

Query: 117 DLDRIKGPWSPEEDDMLQSLVHRHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPQVEHRA 296
           D+DRIKGPWSPEEDD LQ LV +HGPRNWSLISKSIPGRSGKSCRLRWCNQLSPQVEHRA
Sbjct: 7   DVDRIKGPWSPEEDDALQKLVQKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPQVEHRA 66

Query: 297 FTPEEDDTIMRAHAKFGNKWATIARLLSGRTDNAIKNHWNSTLKRKCS--SDDGDLN--- 461
           FT EEDDTIMRAHA+FGNKWATIARLLSGRTDNAIKNHWNSTLKRKCS  ++DG      
Sbjct: 67  FTSEEDDTIMRAHARFGNKWATIARLLSGRTDNAIKNHWNSTLKRKCSAITEDGSFGGDY 126

Query: 462 --RPFKRSASVGTVPTXXXXXXXXXXXXXXXXXXXXXXXXIMSSSHVFRPVARTGGILPP 635
              P KRS S G                            ++SSSHV+RPVARTGGI+PP
Sbjct: 127 PPHPLKRSVSAGA--AAPVSGLYLSPSSPCGSDVSDSSLPVVSSSHVYRPVARTGGIIPP 184

Query: 636 SHQLETSSSTNDPPTSLSLSLPGADSFEDHSKPSDQHQQSPLPMRQFSPIFSDFA----- 800
               ET+SS+NDPPTSLSLSLPG DS E  ++  + +   P    Q  P  +        
Sbjct: 185 ----ETTSSSNDPPTSLSLSLPGVDSCEVSNRAPEPNHAPPANPIQMIPTMAPLQQIPMH 240

Query: 801 EKQQPFKAAATA----------FSPEFLSLMQEMIKKEVKNYMS--EQNGACLQAVDGIR 944
           +  QP    AT           FS E L++MQEMI+KEV+NYM+  EQNG CLQA DGIR
Sbjct: 241 QHNQPATVPATVLSQGEKPFIPFSAELLAVMQEMIRKEVRNYMAGLEQNGVCLQA-DGIR 299

Query: 945 NAVVKRIGISKIE 983
           NA VKRIGISKIE
Sbjct: 300 NAAVKRIGISKIE 312


>gb|AAY28930.1| sucrose responsive element binding protein [Vitis vinifera]
          Length = 312

 Score =  341 bits (874), Expect = 2e-91
 Identities = 190/313 (60%), Positives = 211/313 (67%), Gaps = 24/313 (7%)
 Frame = +3

Query: 117 DLDRIKGPWSPEEDDMLQSLVHRHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPQVEHRA 296
           D DRIKGPWSPEEDD LQ LV +HGPRNWSLISKSIPGRSGKSCRLRWCNQLSPQVEHRA
Sbjct: 7   DADRIKGPWSPEEDDALQKLVQKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPQVEHRA 66

Query: 297 FTPEEDDTIMRAHAKFGNKWATIARLLSGRTDNAIKNHWNSTLKRKCS--SDDGDLN--- 461
           FT EEDDTIMRAHA+FGNKWATIARLLSGRTDNAIKNHWNSTLKRKCS  ++DG      
Sbjct: 67  FTSEEDDTIMRAHARFGNKWATIARLLSGRTDNAIKNHWNSTLKRKCSAITEDGSFGGDY 126

Query: 462 --RPFKRSASVGTVPTXXXXXXXXXXXXXXXXXXXXXXXXIMSSSHVFRPVARTGGILPP 635
              P KRS S G                            ++SSSHV+RPVARTGGI+PP
Sbjct: 127 PPHPLKRSVSAGA--AAPVSGLYLSPSSPCGSDVSDSSLPVVSSSHVYRPVARTGGIIPP 184

Query: 636 SHQLETSSSTNDPPTSLSLSLPGADSFEDHSKPSDQHQQSPLPMRQFSPIFSDFA----- 800
               ET+SS+NDPPTSLSLSLPG DS E  ++  + +   P    Q  P  +        
Sbjct: 185 ----ETTSSSNDPPTSLSLSLPGVDSCEVSNRAPEPNHAPPANPIQMIPTMAPLQQIPMH 240

Query: 801 EKQQPFKAAATA----------FSPEFLSLMQEMIKKEVKNYMS--EQNGACLQAVDGIR 944
           +  QP    AT           FS E L++MQEMI+KEV+NY +  EQNG CLQA DGIR
Sbjct: 241 QHNQPATVPATVLSQGEKPFIPFSAELLAVMQEMIRKEVRNYTAGLEQNGVCLQA-DGIR 299

Query: 945 NAVVKRIGISKIE 983
           NA VKRIGISKIE
Sbjct: 300 NAAVKRIGISKIE 312


>ref|XP_002285015.1| PREDICTED: transcription factor MYB44-like [Vitis vinifera]
          Length = 313

 Score =  334 bits (857), Expect = 2e-89
 Identities = 190/316 (60%), Positives = 212/316 (67%), Gaps = 27/316 (8%)
 Frame = +3

Query: 117 DLDRIKGPWSPEEDDMLQSLVHRHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPQVEHRA 296
           DLDRIKGPWSPEED+ LQ LV +HGPRNWSLISKSIPGRSGKSCRLRWCNQLSPQVEHRA
Sbjct: 7   DLDRIKGPWSPEEDEALQRLVQKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPQVEHRA 66

Query: 297 FTPEEDDTIMRAHAKFGNKWATIARLLSGRTDNAIKNHWNSTLKRKCSS------DDGDL 458
           FTPEED TI+RAHA+FGNKWATIARLL GRTDNAIKNHWNSTLKRKCSS       DG  
Sbjct: 67  FTPEEDATIIRAHARFGNKWATIARLLVGRTDNAIKNHWNSTLKRKCSSITEDMIADGHA 126

Query: 459 NRPFKRSASVGTVPTXXXXXXXXXXXXXXXXXXXXXXXXIMSSSHVFRPVARTGGILPPS 638
             P KRSASVG   T                         M+SS V+RPV RTG I+ P+
Sbjct: 127 QPPLKRSASVGAGTTVSGHNLSPSSPSGSEFSDSSAPG--MASSLVYRPVPRTGPIVLPT 184

Query: 639 HQLETSSSTNDPPTSLSLSLPGADSFE--------DHSK-----------PSDQHQQSPL 761
            ++E +SSTNDPPTSLSLSLPG+DS E        DH K           P  Q QQ+P 
Sbjct: 185 QKIEAASSTNDPPTSLSLSLPGSDSCEVSNHLSGSDHVKIQNQILQSPAIPPVQLQQNPG 244

Query: 762 PMRQFSPIFSDFAEKQQPFKAAATAFSPEFLSLMQEMIKKEVKNYMS--EQNGACLQAVD 935
             R            ++PF      F+PEFL++MQEMI+KEV+NYMS  EQNG CLQ  +
Sbjct: 245 SPRNIQNCELGLGMSEKPF------FTPEFLAVMQEMIRKEVRNYMSGMEQNGLCLQ-TE 297

Query: 936 GIRNAVVKRIGISKIE 983
            I NAV+KRIGI KIE
Sbjct: 298 AIWNAVMKRIGIGKIE 313


>emb|CAN81361.1| hypothetical protein VITISV_028904 [Vitis vinifera]
          Length = 309

 Score =  327 bits (837), Expect = 5e-87
 Identities = 188/313 (60%), Positives = 208/313 (66%), Gaps = 27/313 (8%)
 Frame = +3

Query: 126 RIKGPWSPEEDDMLQSLVHRHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPQVEHRAFTP 305
           RIKGPWSPEED+ LQ LV +HGPRNWSLISKSIPGRSGKSCRLRWCNQLSPQVEHRAFTP
Sbjct: 6   RIKGPWSPEEDEALQRLVQKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPQVEHRAFTP 65

Query: 306 EEDDTIMRAHAKFGNKWATIARLLSGRTDNAIKNHWNSTLKRKCSS------DDGDLNRP 467
           EED TI+RAHA+FGNKWATIARLL GRTDNAIKNHWNSTLKRKCSS       DG    P
Sbjct: 66  EEDATIIRAHARFGNKWATIARLLVGRTDNAIKNHWNSTLKRKCSSITEDMIADGHAQPP 125

Query: 468 FKRSASVGTVPTXXXXXXXXXXXXXXXXXXXXXXXXIMSSSHVFRPVARTGGILPPSHQL 647
            KRSASVG   T                         M SS V+RPV RTG I+ P+ ++
Sbjct: 126 LKRSASVGAGTTVSGHNLSPSSXSGSEFSDSSAPG--MXSSLVYRPVPRTGPIVLPTQKI 183

Query: 648 ETSSSTNDPPTSLSLSLPGADSFE--------DHSK-----------PSDQHQQSPLPMR 770
           E  SSTNDPPTSLSLSLPG+DS E        DH K           P  Q QQ+P   R
Sbjct: 184 EAXSSTNDPPTSLSLSLPGSDSCEVSNHLSGSDHVKIQNQILQSPAIPPVQLQQNPGSPR 243

Query: 771 QFSPIFSDFAEKQQPFKAAATAFSPEFLSLMQEMIKKEVKNYMS--EQNGACLQAVDGIR 944
                       ++PF      F+PEFL++MQEMI+KEV+NYMS  EQNG CLQ  + I 
Sbjct: 244 NIQNCELGLGMSEKPF------FTPEFLAVMQEMIRKEVRNYMSGMEQNGLCLQ-TEAIW 296

Query: 945 NAVVKRIGISKIE 983
           NAV+KRIGI KIE
Sbjct: 297 NAVMKRIGIGKIE 309


Top