BLASTX nr result

ID: Cimicifuga21_contig00000584 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00000584
         (1087 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267504.2| PREDICTED: uncharacterized protein LOC100257...   310   5e-82
ref|XP_002515069.1| RNA-binding region-containing protein, putat...   297   3e-78
ref|XP_003529876.1| PREDICTED: uncharacterized protein LOC100786...   291   2e-76
gb|ABK93394.1| unknown [Populus trichocarpa]                          283   5e-74
ref|XP_003548403.1| PREDICTED: uncharacterized protein LOC100788...   282   9e-74

>ref|XP_002267504.2| PREDICTED: uncharacterized protein LOC100257521 [Vitis vinifera]
           gi|296089004|emb|CBI38707.3| unnamed protein product
           [Vitis vinifera]
          Length = 267

 Score =  310 bits (793), Expect = 5e-82
 Identities = 156/217 (71%), Positives = 173/217 (79%), Gaps = 5/217 (2%)
 Frame = -2

Query: 735 DTTYTKIFVGGLAWETQRETMRRYFEQFGEIQEAVVITDKNTGRSKGYGFVTFKDPDSAM 556
           DTTYTKIFVGGLAWETQR+TMRRYFEQFGEIQEAVVITDKNTGRSKGYGFVTFKDPD+AM
Sbjct: 12  DTTYTKIFVGGLAWETQRDTMRRYFEQFGEIQEAVVITDKNTGRSKGYGFVTFKDPDAAM 71

Query: 555 RACQDPSPVIDGRRANCNLASLGAQQRPHPSTPQQHGMGGRYRPA----APPAYQGSSST 388
           RACQ+PSPVIDGRRANCNLASLGA  +  P TP QHG  GR+RPA    APPAY GSSST
Sbjct: 72  RACQNPSPVIDGRRANCNLASLGA-HKTRPPTP-QHG-AGRFRPAPGLVAPPAYHGSSST 128

Query: 387 YFHQP-AQYVHPYSAYGYSGYSQDNMYPMNYYNXXXXXXXXXXXXXXXXXXXXXXYPNFY 211
           YFHQP +QY  PYS YGY+GYSQD+MYPMN+Y+                      + NFY
Sbjct: 129 YFHQPTSQYAFPYSTYGYTGYSQDSMYPMNFYSVYGGQQFSPYYTTGATGPPGIFH-NFY 187

Query: 210 PFYAQYAQSSQTQGYGIQYPQMVQYPYVPQHYSPTGI 100
           P+YAQYAQSSQ  G+G+QYPQ++QYPY+PQHYS  GI
Sbjct: 188 PYYAQYAQSSQGNGFGVQYPQVMQYPYLPQHYSSAGI 224


>ref|XP_002515069.1| RNA-binding region-containing protein, putative [Ricinus communis]
           gi|223545549|gb|EEF47053.1| RNA-binding
           region-containing protein, putative [Ricinus communis]
          Length = 291

 Score =  297 bits (761), Expect = 3e-78
 Identities = 152/217 (70%), Positives = 168/217 (77%), Gaps = 5/217 (2%)
 Frame = -2

Query: 735 DTTYTKIFVGGLAWETQRETMRRYFEQFGEIQEAVVITDKNTGRSKGYGFVTFKDPDSAM 556
           DTT+TKIFVGGLAWETQR+TMRRYFEQFGEI EAVVITDKNTGRSKGYGFVTFKDP++A+
Sbjct: 20  DTTFTKIFVGGLAWETQRDTMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFKDPEAAI 79

Query: 555 RACQDPSPVIDGRRANCNLASLGAQQRPHPSTPQQHGMGGRYRPA----APPAYQGSSST 388
           RACQ+PSPVIDGRRANCNLASLGA +   P TP QHG GGR+RPA    APPAY GSSS+
Sbjct: 80  RACQNPSPVIDGRRANCNLASLGAHKTRSP-TP-QHG-GGRFRPAPGVVAPPAYHGSSSS 136

Query: 387 YFHQP-AQYVHPYSAYGYSGYSQDNMYPMNYYNXXXXXXXXXXXXXXXXXXXXXXYPNFY 211
           Y HQP  QY  PYSAYGYSGYSQD +YP+NYY                       + N+Y
Sbjct: 137 YVHQPTGQYTFPYSAYGYSGYSQDTIYPLNYYGVYGGQQFSPYYSAGASGTPGMFH-NYY 195

Query: 210 PFYAQYAQSSQTQGYGIQYPQMVQYPYVPQHYSPTGI 100
           PFY QYAQSSQ  GYG+QYPQMVQYP +PQ+Y  TGI
Sbjct: 196 PFYTQYAQSSQAHGYGVQYPQMVQYPCLPQNYGSTGI 232


>ref|XP_003529876.1| PREDICTED: uncharacterized protein LOC100786208 [Glycine max]
          Length = 296

 Score =  291 bits (745), Expect = 2e-76
 Identities = 148/219 (67%), Positives = 164/219 (74%), Gaps = 7/219 (3%)
 Frame = -2

Query: 735 DTTYTKIFVGGLAWETQRETMRRYFEQFGEIQEAVVITDKNTGRSKGYGFVTFKDPDSAM 556
           DTT+TKIFVGGLAWETQR+TMRRYFEQFGEI EAVVITDKNTGRSKGYGFVTFKDP+SAM
Sbjct: 20  DTTFTKIFVGGLAWETQRDTMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFKDPESAM 79

Query: 555 RACQDPSPVIDGRRANCNLASLGAQQRPHPSTPQQHGMGGRYRP-----AAPPAYQGSSS 391
           RACQ+PSPVIDGRRANCNLASLGA +   P+   QHG  GR+RP     A+PPAY GSSS
Sbjct: 80  RACQNPSPVIDGRRANCNLASLGASKNRPPTF--QHG-AGRFRPPPGLVASPPAYHGSSS 136

Query: 390 TYFHQ-PAQYVHPYSAYGYSGYSQDNMYPMNYYNXXXXXXXXXXXXXXXXXXXXXXYPNF 214
           T+FHQ P QY  PYSAY YSGYSQD +YP +YYN                        N 
Sbjct: 137 TFFHQPPRQYTFPYSAYRYSGYSQDTLYPTSYYNVYGVQQFSPYYPSAGASGEVGLIHNI 196

Query: 213 YPFYAQYAQSSQTQGYGIQYPQMVQYPYVPQHY-SPTGI 100
           YPFY QYAQS Q  G+G+QYPQM Q+P++PQHY S TGI
Sbjct: 197 YPFYGQYAQSIQAPGFGVQYPQMAQFPFLPQHYGSSTGI 235


>gb|ABK93394.1| unknown [Populus trichocarpa]
          Length = 294

 Score =  283 bits (724), Expect = 5e-74
 Identities = 145/217 (66%), Positives = 162/217 (74%), Gaps = 6/217 (2%)
 Frame = -2

Query: 735 DTTYTKIFVGGLAWETQRETMRRYFEQFGEIQEAVVITDKNTGRSKGYGFVTFKDPDSAM 556
           DTTYTKIFVGGLAWETQR+ MRRYFEQFGEI EAVVITDKNTGRSKGYGFVTFKDP++A+
Sbjct: 21  DTTYTKIFVGGLAWETQRDAMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFKDPEAAV 80

Query: 555 RACQDPSPVIDGRRANCNLASLGAQQRPHPSTPQQHGMGGRYRP----AAPPAYQGSSST 388
           RACQ+PSPVIDGRRANCNLASLG Q+   P TP QHG  GR+RP     APP + GSS+ 
Sbjct: 81  RACQNPSPVIDGRRANCNLASLGGQKN-RPPTP-QHGT-GRFRPVHGLVAPPTFPGSSAP 137

Query: 387 YFHQPA-QYVHPYSAYGYSGYSQDNMYPMNYYNXXXXXXXXXXXXXXXXXXXXXXYP-NF 214
           Y +QP+ QY  PYSAYGY+GYSQD MYP++YY                       +P N 
Sbjct: 138 YIYQPSGQYSFPYSAYGYAGYSQDAMYPLSYYGVYGGQQFSPYYSTGGASGTPGMFPHNL 197

Query: 213 YPFYAQYAQSSQTQGYGIQYPQMVQYPYVPQHYSPTG 103
           YPFY QYAQSSQ  G+GIQYPQMVQYPY PQ +  TG
Sbjct: 198 YPFYTQYAQSSQAHGFGIQYPQMVQYPYSPQQHGSTG 234


>ref|XP_003548403.1| PREDICTED: uncharacterized protein LOC100788899 [Glycine max]
          Length = 291

 Score =  282 bits (722), Expect = 9e-74
 Identities = 145/220 (65%), Positives = 162/220 (73%), Gaps = 8/220 (3%)
 Frame = -2

Query: 735 DTTYTKIFVGGLAWETQRETMRRYFEQFGEIQEAVVITDKNTGRSKGYGFVTFKDPDSAM 556
           DTT+TKIFVGGLAWETQR+TMRRYFEQFGEI EAVVITDKNTGRSKGYGFVTFKDP+SAM
Sbjct: 20  DTTFTKIFVGGLAWETQRDTMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFKDPESAM 79

Query: 555 RACQDPSPVIDGRRANCNLASLGAQQRPHPSTPQQHGMGGRYRP-----AAPPAYQG-SS 394
           RACQ+PSPVIDGRRANCNLASLGA +   P+   QHG  GR+RP      + PAY G SS
Sbjct: 80  RACQNPSPVIDGRRANCNLASLGASKNRPPTF--QHG-AGRFRPPPGLVTSSPAYHGSSS 136

Query: 393 STYFHQ-PAQYVHPYSAYGYSGYSQDNMYPMNYYN-XXXXXXXXXXXXXXXXXXXXXXYP 220
           ST+FHQ P +Y  PYSAYGYSGYSQD +YP +YYN                         
Sbjct: 137 STFFHQPPREYAFPYSAYGYSGYSQDTLYPTSYYNVYGVQQFSSPYYPSAGASGALGLIH 196

Query: 219 NFYPFYAQYAQSSQTQGYGIQYPQMVQYPYVPQHYSPTGI 100
           N YPFY QYAQS Q  G+G+QYPQM Q+P++PQHY  TGI
Sbjct: 197 NIYPFYGQYAQSIQAPGFGVQYPQMAQFPFLPQHYGSTGI 236


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