BLASTX nr result

ID: Cimicifuga21_contig00000566 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00000566
         (267 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306562.1| predicted protein [Populus trichocarpa] gi|2...    87   2e-15
ref|XP_002308991.1| predicted protein [Populus trichocarpa] gi|2...    86   3e-15
emb|CBI19201.3| unnamed protein product [Vitis vinifera]               83   2e-14
ref|XP_002513969.1| conserved hypothetical protein [Ricinus comm...    83   2e-14
ref|XP_002285745.1| PREDICTED: 39S ribosomal protein L41-A, mito...    83   2e-14

>ref|XP_002306562.1| predicted protein [Populus trichocarpa] gi|222856011|gb|EEE93558.1|
           predicted protein [Populus trichocarpa]
          Length = 92

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 41/43 (95%), Positives = 42/43 (97%)
 Frame = +3

Query: 138 MPLGLIQGIGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTG 266
           MPLGLI GIGRAMRRKRTSSLDILSSKRAPR+YYKGKNCKPTG
Sbjct: 1   MPLGLITGIGRAMRRKRTSSLDILSSKRAPRNYYKGKNCKPTG 43


>ref|XP_002308991.1| predicted protein [Populus trichocarpa] gi|222854967|gb|EEE92514.1|
           predicted protein [Populus trichocarpa]
          Length = 92

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 41/43 (95%), Positives = 41/43 (95%)
 Frame = +3

Query: 138 MPLGLIQGIGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTG 266
           MPLGLI GIGRAMRRKRTSSLDILSSKRAPR YYKGKNCKPTG
Sbjct: 1   MPLGLITGIGRAMRRKRTSSLDILSSKRAPRTYYKGKNCKPTG 43


>emb|CBI19201.3| unnamed protein product [Vitis vinifera]
          Length = 175

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 40/43 (93%), Positives = 40/43 (93%)
 Frame = +3

Query: 138 MPLGLIQGIGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTG 266
           M LGLI GIGRA RRKRTSSLDILSSKRAPRDYYKGKNCKPTG
Sbjct: 79  MALGLILGIGRAFRRKRTSSLDILSSKRAPRDYYKGKNCKPTG 121


>ref|XP_002513969.1| conserved hypothetical protein [Ricinus communis]
           gi|223547055|gb|EEF48552.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 90

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 40/43 (93%), Positives = 40/43 (93%)
 Frame = +3

Query: 138 MPLGLIQGIGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTG 266
           M LGLI GIGRA RRKRTSSLDILSSKRAPRDYYKGKNCKPTG
Sbjct: 1   MALGLILGIGRAFRRKRTSSLDILSSKRAPRDYYKGKNCKPTG 43


>ref|XP_002285745.1| PREDICTED: 39S ribosomal protein L41-A, mitochondrial [Vitis
           vinifera] gi|147843318|emb|CAN82662.1| hypothetical
           protein VITISV_004928 [Vitis vinifera]
          Length = 97

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 40/43 (93%), Positives = 40/43 (93%)
 Frame = +3

Query: 138 MPLGLIQGIGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTG 266
           M LGLI GIGRA RRKRTSSLDILSSKRAPRDYYKGKNCKPTG
Sbjct: 1   MALGLILGIGRAFRRKRTSSLDILSSKRAPRDYYKGKNCKPTG 43