BLASTX nr result

ID: Cimicifuga21_contig00000559 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00000559
         (1086 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318640.1| predicted protein [Populus trichocarpa] gi|2...   373   e-101
emb|CAD42725.1| putative rac protein [Nicotiana tabacum]              372   e-101
ref|XP_002452568.1| hypothetical protein SORBIDRAFT_04g028280 [S...   370   e-100
ref|XP_002322155.1| predicted protein [Populus trichocarpa] gi|2...   370   e-100
ref|NP_001104929.1| Rho-related protein from plants 1 [Zea mays]...   369   e-100

>ref|XP_002318640.1| predicted protein [Populus trichocarpa] gi|222859313|gb|EEE96860.1|
           predicted protein [Populus trichocarpa]
          Length = 211

 Score =  373 bits (958), Expect = e-101
 Identities = 182/212 (85%), Positives = 193/212 (91%)
 Frame = -1

Query: 948 MASNASRFIKCVTVGDGAVGKTCMLICYTSNKFPTDYVPTVFDNFSANVVVEGTTVNLGL 769
           MAS+ASRFIKCVTVGDGAVGKTCMLICYTSNKFPTDY+PTVFDNFSANVVVEGTTVNLGL
Sbjct: 1   MASSASRFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVVEGTTVNLGL 60

Query: 768 WDTAGQEDYNRLRPLSYRGGDVFVLAFSLVSRASYENVFKKWIPELQHYAPGVPVVLAGT 589
           WDTAGQEDYNRLRPLSYRG DVFVLAFSLVSRASYENV KKWIPELQHYAPG+P+VL G 
Sbjct: 61  WDTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHYAPGIPIVLVGA 120

Query: 588 KLDLREDKHYLADHPGLVPVTTAQGEELRKQIGASYYIECSSKTQQNVKAVFDAAIRVVI 409
           KLDLREDKHYLADHPGLVPVTTAQGEELRKQIGA+YY+ECSSKTQQNVKAVFDAAI+VVI
Sbjct: 121 KLDLREDKHYLADHPGLVPVTTAQGEELRKQIGAAYYVECSSKTQQNVKAVFDAAIKVVI 180

Query: 408 XXXXXXXXXXXKSQRGCSLMHAFCGRKFVCLK 313
                      K +RGC L++ FCGR+ VCLK
Sbjct: 181 KPAQKQKERKKKPRRGC-LLNVFCGRRLVCLK 211


>emb|CAD42725.1| putative rac protein [Nicotiana tabacum]
          Length = 210

 Score =  372 bits (955), Expect = e-101
 Identities = 186/212 (87%), Positives = 194/212 (91%)
 Frame = -1

Query: 948 MASNASRFIKCVTVGDGAVGKTCMLICYTSNKFPTDYVPTVFDNFSANVVVEGTTVNLGL 769
           MAS+ASRFIKCVTVGDGAVGKTCMLICYTSNKFPTDYVPTVFDNFSANVVVEGTTVNLGL
Sbjct: 1   MASSASRFIKCVTVGDGAVGKTCMLICYTSNKFPTDYVPTVFDNFSANVVVEGTTVNLGL 60

Query: 768 WDTAGQEDYNRLRPLSYRGGDVFVLAFSLVSRASYENVFKKWIPELQHYAPGVPVVLAGT 589
           WDTAGQEDYNRLRPLSYRG DVFVLAFSLVSRASYEN+ KKWIPELQHYAPG+PVVLAGT
Sbjct: 61  WDTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENILKKWIPELQHYAPGIPVVLAGT 120

Query: 588 KLDLREDKHYLADHPGLVPVTTAQGEELRKQIGASYYIECSSKTQQNVKAVFDAAIRVVI 409
           KLDLREDKH+LADHPGLVPVTTAQGEELRKQIGA+YYIECSSKTQQNVKAVFDAAI+VVI
Sbjct: 121 KLDLREDKHFLADHPGLVPVTTAQGEELRKQIGAAYYIECSSKTQQNVKAVFDAAIKVVI 180

Query: 408 XXXXXXXXXXXKSQRGCSLMHAFCGRKFVCLK 313
                      K +RGC LM+  CGRK VCLK
Sbjct: 181 -KPPQKQKEKKKQRRGC-LMNVMCGRKLVCLK 210


>ref|XP_002452568.1| hypothetical protein SORBIDRAFT_04g028280 [Sorghum bicolor]
           gi|241932399|gb|EES05544.1| hypothetical protein
           SORBIDRAFT_04g028280 [Sorghum bicolor]
          Length = 214

 Score =  370 bits (949), Expect = e-100
 Identities = 180/213 (84%), Positives = 193/213 (90%), Gaps = 1/213 (0%)
 Frame = -1

Query: 948 MASNASRFIKCVTVGDGAVGKTCMLICYTSNKFPTDYVPTVFDNFSANVVVEGTTVNLGL 769
           MAS+ASRFIKCVTVGDGAVGKTCMLICYTSNKFPTDY+PTVFDNFSANVVV+GTTVNLGL
Sbjct: 1   MASSASRFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVVDGTTVNLGL 60

Query: 768 WDTAGQEDYNRLRPLSYRGGDVFVLAFSLVSRASYENVFKKWIPELQHYAPGVPVVLAGT 589
           WDTAGQEDYNRLRPLSYRG DVFVLAFSLVSRASYEN+ KKWIPELQHYAPGVPVVL GT
Sbjct: 61  WDTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENIMKKWIPELQHYAPGVPVVLVGT 120

Query: 588 KLDLREDKHYLADHPGLVPVTTAQGEELRKQIGASYYIECSSKTQQNVKAVFDAAIRVVI 409
           KLDLREDKHYL DHPGLVPVTTAQGEELR+QIGA YY+ECSSKTQQNVKAVFDAAI+VVI
Sbjct: 121 KLDLREDKHYLMDHPGLVPVTTAQGEELRRQIGAMYYVECSSKTQQNVKAVFDAAIKVVI 180

Query: 408 -XXXXXXXXXXXKSQRGCSLMHAFCGRKFVCLK 313
                       KS++GCS+++ FCGRK +C K
Sbjct: 181 QPPTKLREKKKKKSRKGCSMVNLFCGRKMLCFK 213


>ref|XP_002322155.1| predicted protein [Populus trichocarpa] gi|222869151|gb|EEF06282.1|
           predicted protein [Populus trichocarpa]
          Length = 211

 Score =  370 bits (949), Expect = e-100
 Identities = 182/212 (85%), Positives = 192/212 (90%)
 Frame = -1

Query: 948 MASNASRFIKCVTVGDGAVGKTCMLICYTSNKFPTDYVPTVFDNFSANVVVEGTTVNLGL 769
           MAS+ASRFIKCVTVGDGAVGKTCMLICYTSNKFPTDY+PTVFDNFSANV VEGTTVNLGL
Sbjct: 1   MASSASRFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVAVEGTTVNLGL 60

Query: 768 WDTAGQEDYNRLRPLSYRGGDVFVLAFSLVSRASYENVFKKWIPELQHYAPGVPVVLAGT 589
           WDTAGQEDYNRLRPLSYRG DVFVLAFSLVSRASYENV KKWIPELQHYAPGVPVVL GT
Sbjct: 61  WDTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHYAPGVPVVLVGT 120

Query: 588 KLDLREDKHYLADHPGLVPVTTAQGEELRKQIGASYYIECSSKTQQNVKAVFDAAIRVVI 409
           KLDLREDKHYLADHPGLVPVT AQGEELRKQIGA+YYIECSSKTQQNVKAVFDAAI+VVI
Sbjct: 121 KLDLREDKHYLADHPGLVPVTMAQGEELRKQIGAAYYIECSSKTQQNVKAVFDAAIKVVI 180

Query: 408 XXXXXXXXXXXKSQRGCSLMHAFCGRKFVCLK 313
                      K +RGC L++ FCGR+ +CL+
Sbjct: 181 KPAQKQKERKKKPRRGC-LLNVFCGRRLLCLE 211


>ref|NP_001104929.1| Rho-related protein from plants 1 [Zea mays]
           gi|4959459|gb|AAD34355.1| Rop1 small GTP binding protein
           [Zea mays] gi|238013920|gb|ACR37995.1| unknown [Zea
           mays] gi|413938807|gb|AFW73358.1| Rop1 small GTP binding
           protein [Zea mays]
          Length = 214

 Score =  369 bits (946), Expect = e-100
 Identities = 182/213 (85%), Positives = 193/213 (90%), Gaps = 1/213 (0%)
 Frame = -1

Query: 948 MASNASRFIKCVTVGDGAVGKTCMLICYTSNKFPTDYVPTVFDNFSANVVVEGTTVNLGL 769
           MAS+ASRFIKCVTVGDGAVGKTCMLICYTSNKFPTDY+PTVFDNFSANVVV+GTTVNLGL
Sbjct: 1   MASSASRFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVVDGTTVNLGL 60

Query: 768 WDTAGQEDYNRLRPLSYRGGDVFVLAFSLVSRASYENVFKKWIPELQHYAPGVPVVLAGT 589
           WDTAGQEDYNRLRPLSYRG DVFVLAFSLVSRASYEN+ KKWIPELQHYAPGVPVVLAGT
Sbjct: 61  WDTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENIMKKWIPELQHYAPGVPVVLAGT 120

Query: 588 KLDLREDKHYLADHPGLVPVTTAQGEELRKQIGASYYIECSSKTQQNVKAVFDAAIRVVI 409
           KLDLREDKHYL DHPGLVPVTTAQGEELR+QIGA YYIECSSKTQQNVKAVFDAAI+VVI
Sbjct: 121 KLDLREDKHYLMDHPGLVPVTTAQGEELRRQIGAMYYIECSSKTQQNVKAVFDAAIKVVI 180

Query: 408 -XXXXXXXXXXXKSQRGCSLMHAFCGRKFVCLK 313
                       KS++GCS+M+ F GRK +C K
Sbjct: 181 QPPTKIREKKKKKSRKGCSMMNIFGGRKMLCFK 213


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