BLASTX nr result

ID: Cimicifuga21_contig00000551 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00000551
         (886 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK22422.1| unknown [Picea sitchensis]                             218   1e-54
gb|ABK21036.1| unknown [Picea sitchensis] gi|116790181|gb|ABK255...   218   2e-54
gb|ACN41123.1| unknown [Picea sitchensis]                             215   1e-53
gb|AAR83866.1| 40S ribosomal protein S17 [Capsicum annuum]            214   2e-53
ref|XP_002335886.1| predicted protein [Populus trichocarpa] gi|2...   214   2e-53

>gb|ABK22422.1| unknown [Picea sitchensis]
          Length = 145

 Score =  218 bits (555), Expect = 1e-54
 Identities = 110/122 (90%), Positives = 117/122 (95%)
 Frame = -3

Query: 782 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 603
           MGRVRTKTVKKSSRQV+ERYYSRMTLDFHTNKKI+EEVAIIPSKRLRNKIAGFSTHLMKR
Sbjct: 1   MGRVRTKTVKKSSRQVLERYYSRMTLDFHTNKKIVEEVAIIPSKRLRNKIAGFSTHLMKR 60

Query: 602 IQRGPVRGISLKLQEEERERRMDFVPEESAINITEIEVDKETMDMLAALGMGELPGVVRQ 423
           IQRGPVRGISLKLQEEERERRMDFVP+ESAI I  IEVDKETMDMLA+LGM +LPGVV+Q
Sbjct: 61  IQRGPVRGISLKLQEEERERRMDFVPDESAIKIDVIEVDKETMDMLASLGMADLPGVVKQ 120

Query: 422 VE 417
            +
Sbjct: 121 AD 122


>gb|ABK21036.1| unknown [Picea sitchensis] gi|116790181|gb|ABK25531.1| unknown
           [Picea sitchensis] gi|116793494|gb|ABK26768.1| unknown
           [Picea sitchensis] gi|148905787|gb|ABR16057.1| unknown
           [Picea sitchensis] gi|224285099|gb|ACN40277.1| unknown
           [Picea sitchensis]
          Length = 146

 Score =  218 bits (554), Expect = 2e-54
 Identities = 110/122 (90%), Positives = 116/122 (95%)
 Frame = -3

Query: 782 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 603
           MGRVRTKTVKKSSRQ+IERYYSRMTLDFHTNKKI+EEVAIIPSKRLRNKIAGFSTHLMKR
Sbjct: 1   MGRVRTKTVKKSSRQIIERYYSRMTLDFHTNKKIVEEVAIIPSKRLRNKIAGFSTHLMKR 60

Query: 602 IQRGPVRGISLKLQEEERERRMDFVPEESAINITEIEVDKETMDMLAALGMGELPGVVRQ 423
           IQRGPVRGISLKLQEEERERRMDFVPEESAI    IEVDKETMDMLA+LGM +LPGVV+Q
Sbjct: 61  IQRGPVRGISLKLQEEERERRMDFVPEESAIKTEVIEVDKETMDMLASLGMSDLPGVVKQ 120

Query: 422 VE 417
            +
Sbjct: 121 AD 122


>gb|ACN41123.1| unknown [Picea sitchensis]
          Length = 146

 Score =  215 bits (548), Expect = 1e-53
 Identities = 109/122 (89%), Positives = 115/122 (94%)
 Frame = -3

Query: 782 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 603
           MGRVR KTVKKSSRQ+IERYYSRMTLDFHTNKKI+EEVAIIPSKRLRNKIAGFSTHLMKR
Sbjct: 1   MGRVRPKTVKKSSRQIIERYYSRMTLDFHTNKKIVEEVAIIPSKRLRNKIAGFSTHLMKR 60

Query: 602 IQRGPVRGISLKLQEEERERRMDFVPEESAINITEIEVDKETMDMLAALGMGELPGVVRQ 423
           IQRGPVRGISLKLQEEERERRMDFVPEESAI    IEVDKETMDMLA+LGM +LPGVV+Q
Sbjct: 61  IQRGPVRGISLKLQEEERERRMDFVPEESAIKTEVIEVDKETMDMLASLGMSDLPGVVKQ 120

Query: 422 VE 417
            +
Sbjct: 121 AD 122


>gb|AAR83866.1| 40S ribosomal protein S17 [Capsicum annuum]
          Length = 145

 Score =  214 bits (546), Expect = 2e-53
 Identities = 109/120 (90%), Positives = 115/120 (95%)
 Frame = -3

Query: 782 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 603
           MGRVRTKTVKKSSRQVIERYYS+MTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR
Sbjct: 1   MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60

Query: 602 IQRGPVRGISLKLQEEERERRMDFVPEESAINITEIEVDKETMDMLAALGMGELPGVVRQ 423
           IQ+GPVRGISLKLQEEERERRMDFVP+ESAI    IEVDKET+DML+ALGM ELPGVV+Q
Sbjct: 61  IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDLIEVDKETLDMLSALGMAELPGVVKQ 120


>ref|XP_002335886.1| predicted protein [Populus trichocarpa]
           gi|224097574|ref|XP_002310992.1| predicted protein
           [Populus trichocarpa] gi|118485906|gb|ABK94799.1|
           unknown [Populus trichocarpa]
           gi|222836194|gb|EEE74615.1| predicted protein [Populus
           trichocarpa] gi|222850812|gb|EEE88359.1| predicted
           protein [Populus trichocarpa]
          Length = 140

 Score =  214 bits (545), Expect = 2e-53
 Identities = 108/118 (91%), Positives = 114/118 (96%)
 Frame = -3

Query: 782 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 603
           MGRVRTKTVKKSSRQVIERYYS+MTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR
Sbjct: 1   MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60

Query: 602 IQRGPVRGISLKLQEEERERRMDFVPEESAINITEIEVDKETMDMLAALGMGELPGVV 429
           IQ+GPVRGISLKLQEEERERRMDFVPEESAI I EI+VDKET+DMLAALGM + PG+V
Sbjct: 61  IQKGPVRGISLKLQEEERERRMDFVPEESAIKIQEIKVDKETIDMLAALGMSDFPGIV 118


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