BLASTX nr result

ID: Cimicifuga21_contig00000549 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00000549
         (739 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003605309.1| Non-specific lipid-transfer protein [Medicag...   127   2e-27
gb|ACP43542.1| lipid transfer protein [Chimonanthus praecox]          126   5e-27
gb|AAF35186.1|AF195865_1 lipid transfer protein precursor [Gossy...   124   2e-26
gb|ACM78614.1| lipid transfer protein 2 [Tamarix hispida]             124   3e-26
gb|AAF35184.1|AF195863_1 lipid transfer protein precursor [Gossy...   123   3e-26

>ref|XP_003605309.1| Non-specific lipid-transfer protein [Medicago truncatula]
           gi|355506364|gb|AES87506.1| Non-specific lipid-transfer
           protein [Medicago truncatula]
          Length = 545

 Score =  127 bits (319), Expect = 2e-27
 Identities = 57/97 (58%), Positives = 71/97 (73%)
 Frame = -2

Query: 573 PYAEAAMSCGTVVGGLAPCLGYLRGTAPLPLNCCAGVKKLNAAAKSTPDRKIACACLKQV 394
           P AEAA++CGTV G LAPC+GYL+G +     CC GVK+LN+AA +TPDR+ AC CLK  
Sbjct: 448 PMAEAAITCGTVTGSLAPCIGYLKGGSGPSAACCGGVKRLNSAATTTPDRQAACNCLKSA 507

Query: 393 ATGTPGIKPNLAGGLPGKCGVNIGYPISLSVDCSKVR 283
           A    G+ PN+A GLPGKCGVNI Y IS S +C+ +R
Sbjct: 508 AGAISGLNPNIAAGLPGKCGVNIPYKISTSTNCATIR 544



 Score =  110 bits (276), Expect = 2e-22
 Identities = 52/93 (55%), Positives = 61/93 (65%)
 Frame = -2

Query: 573 PYAEAAMSCGTVVGGLAPCLGYLRGTAPLPLNCCAGVKKLNAAAKSTPDRKIACACLKQV 394
           P A+AA+SCGTV   L PC+GYL+G       CC GVK+LN AA +TPDR+ AC CLKQ 
Sbjct: 19  PMADAAISCGTVTSALGPCIGYLKGGPGPSPACCGGVKRLNGAAATTPDRQAACNCLKQA 78

Query: 393 ATGTPGIKPNLAGGLPGKCGVNIGYPISLSVDC 295
           A    G+    A  LPGKCGVNI Y IS S +C
Sbjct: 79  AGAISGLNTAAASALPGKCGVNIPYKISTSTNC 111


>gb|ACP43542.1| lipid transfer protein [Chimonanthus praecox]
          Length = 119

 Score =  126 bits (316), Expect = 5e-27
 Identities = 60/94 (63%), Positives = 67/94 (71%)
 Frame = -2

Query: 567 AEAAMSCGTVVGGLAPCLGYLRGTAPLPLNCCAGVKKLNAAAKSTPDRKIACACLKQVAT 388
           AEAA SCGTVV  L PCL YL+    +P  CC+GVK LNAAAK+TPDR+ AC C+K  A 
Sbjct: 25  AEAAFSCGTVVSSLTPCLTYLKSGGSVPTTCCSGVKSLNAAAKTTPDRQTACNCMKNAAA 84

Query: 387 GTPGIKPNLAGGLPGKCGVNIGYPISLSVDCSKV 286
           G  G+K  LAG LP KCGVNI Y IS S DCSKV
Sbjct: 85  GITGLKLELAGSLPTKCGVNIPYKISPSTDCSKV 118


>gb|AAF35186.1|AF195865_1 lipid transfer protein precursor [Gossypium hirsutum]
           gi|208427033|gb|ACI26698.1| lipid transfer protein
           [Gossypium hirsutum]
          Length = 120

 Score =  124 bits (311), Expect = 2e-26
 Identities = 57/99 (57%), Positives = 70/99 (70%), Gaps = 2/99 (2%)
 Frame = -2

Query: 573 PYAEAAMSCGTVVGGLAPCLGYLRGTAP--LPLNCCAGVKKLNAAAKSTPDRKIACACLK 400
           P A+ A++CG V   LAPC+ YLRGT    +P  CC+G+K LN+AA++TPDR+ AC C+K
Sbjct: 22  PLAQGAVTCGQVTSSLAPCINYLRGTGAGAIPPGCCSGIKSLNSAAQTTPDRQAACKCIK 81

Query: 399 QVATGTPGIKPNLAGGLPGKCGVNIGYPISLSVDCSKVR 283
             A G PGI   LA GLPGKCGVNI Y IS S DCS V+
Sbjct: 82  SAAAGIPGINFGLASGLPGKCGVNIPYKISPSTDCSSVK 120


>gb|ACM78614.1| lipid transfer protein 2 [Tamarix hispida]
          Length = 116

 Score =  124 bits (310), Expect = 3e-26
 Identities = 58/97 (59%), Positives = 72/97 (74%)
 Frame = -2

Query: 573 PYAEAAMSCGTVVGGLAPCLGYLRGTAPLPLNCCAGVKKLNAAAKSTPDRKIACACLKQV 394
           P+AEAA+SCGTVV  LAPCLG+LRG    P  CC+G++ L + A+STPDR+ AC CLK  
Sbjct: 23  PHAEAAISCGTVVSKLAPCLGFLRGGGSPPPACCSGIRNLQSMARSTPDRQAACGCLK-- 80

Query: 393 ATGTPGIKPNLAGGLPGKCGVNIGYPISLSVDCSKVR 283
            + + G+    A  LPGKCGVNIGYPIS SVDCS+V+
Sbjct: 81  -SASAGVNMRNAAALPGKCGVNIGYPISRSVDCSRVK 116


>gb|AAF35184.1|AF195863_1 lipid transfer protein precursor [Gossypium hirsutum]
           gi|208427039|gb|ACI26701.1| lipid transfer protein
           [Gossypium hirsutum]
          Length = 120

 Score =  123 bits (309), Expect = 3e-26
 Identities = 55/99 (55%), Positives = 70/99 (70%), Gaps = 2/99 (2%)
 Frame = -2

Query: 573 PYAEAAMSCGTVVGGLAPCLGYLRGTAP--LPLNCCAGVKKLNAAAKSTPDRKIACACLK 400
           P A+  ++CG V G LAPC+ YLRG     +P  CC+G+K LN+AA++TPDR+ AC C+K
Sbjct: 22  PLAQGTVTCGQVTGSLAPCINYLRGNGAGAVPQGCCSGIKSLNSAAQTTPDRQAACKCIK 81

Query: 399 QVATGTPGIKPNLAGGLPGKCGVNIGYPISLSVDCSKVR 283
             A G PGI   +A GLPGKCGVNI Y IS S DCS+V+
Sbjct: 82  SAAAGIPGINYGIASGLPGKCGVNIPYKISPSTDCSRVK 120


Top