BLASTX nr result

ID: Cimicifuga21_contig00000522 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00000522
         (1366 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270104.1| PREDICTED: short-chain dehydrogenase TIC 32,...   484   e-134
ref|XP_002509816.1| short-chain dehydrogenase, putative [Ricinus...   483   e-134
ref|XP_002513680.1| short-chain dehydrogenase, putative [Ricinus...   480   e-133
ref|XP_002274932.1| PREDICTED: short-chain dehydrogenase TIC 32,...   479   e-133
gb|AFK34836.1| unknown [Lotus japonicus]                              478   e-132

>ref|XP_002270104.1| PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic [Vitis
            vinifera] gi|302143828|emb|CBI22689.3| unnamed protein
            product [Vitis vinifera]
          Length = 313

 Score =  484 bits (1245), Expect = e-134
 Identities = 237/311 (76%), Positives = 275/311 (88%)
 Frame = +1

Query: 142  MWFFNKNGPSGFSSSSTAEEVTQGIDGTGLTAIVTGSSTGIGAETARVLSLRGVHVVIAV 321
            MW+F++ GPSGFS+SSTAEEVTQGIDGTGLTAIVTG+S+GIG ET RVL+LRGVHVV+ V
Sbjct: 1    MWWFSRKGPSGFSASSTAEEVTQGIDGTGLTAIVTGASSGIGTETTRVLALRGVHVVMGV 60

Query: 322  RNMVAGVNVKEAIIKENPTAKVDVMELDLSSMASVKKFASEFNSAGLPLNILINNAGIMA 501
            RNM AG  VKEAI+KE PTAKVD MELDLSSMASV+KFASE+NS+GLPLNILINNAGIMA
Sbjct: 61   RNMSAGKEVKEAIVKEIPTAKVDAMELDLSSMASVRKFASEYNSSGLPLNILINNAGIMA 120

Query: 502  TPFMLSQDNIEMQFATNHIGHFLLTNLLLETMKNTAQKDNVEGRIVNLSSEAHRHPYREG 681
             P+MLS+DNIEMQFATNH+GHFLLTNLLL+TMK T +K   EGRIVN+SS AHR+PYREG
Sbjct: 121  VPYMLSKDNIEMQFATNHLGHFLLTNLLLDTMKKTTRKSRKEGRIVNVSSMAHRYPYREG 180

Query: 682  IRFDKINDKPGYSTIYAYGQSKLANILHSNELTRRLKEEGVQITANSLHPGAIDTDLLRH 861
            IRFDKINDK GYS+++AYGQSKLAN+LH+NEL RR KE+GV ITANSLHPGAI T+L R 
Sbjct: 181  IRFDKINDKSGYSSLFAYGQSKLANVLHANELARRFKEDGVDITANSLHPGAIVTNLFRC 240

Query: 862  HSIINGIVKAVGKYFIKDIPQGAATTCYVALHPQVKGVSGEYFQDSNIGNPTPLAKDVDL 1041
             SI++G+V  VGK  +K++ QGAATTCYVALHPQVKGVSG+YF D NI  P+  AKD +L
Sbjct: 241  SSIVSGLVNTVGKLVLKNVQQGAATTCYVALHPQVKGVSGQYFSDCNIAKPSSQAKDPEL 300

Query: 1042 AKKLWDYSMSL 1074
            AKKLW++SM+L
Sbjct: 301  AKKLWEFSMNL 311


>ref|XP_002509816.1| short-chain dehydrogenase, putative [Ricinus communis]
            gi|223549715|gb|EEF51203.1| short-chain dehydrogenase,
            putative [Ricinus communis]
          Length = 315

 Score =  483 bits (1243), Expect = e-134
 Identities = 237/313 (75%), Positives = 277/313 (88%)
 Frame = +1

Query: 142  MWFFNKNGPSGFSSSSTAEEVTQGIDGTGLTAIVTGSSTGIGAETARVLSLRGVHVVIAV 321
            MW F   GPSGFS++STAE+VTQGIDGTGLTAIVTG+S+GIG ETARVL+LR VHVV+AV
Sbjct: 1    MWIFGWKGPSGFSANSTAEQVTQGIDGTGLTAIVTGASSGIGVETARVLALRDVHVVMAV 60

Query: 322  RNMVAGVNVKEAIIKENPTAKVDVMELDLSSMASVKKFASEFNSAGLPLNILINNAGIMA 501
            RN+ AG NVKE+I+KE PTAK+DVM+ DLSSMASV+KFASE+ S+GLPLN+LINNAG+MA
Sbjct: 61   RNVDAGRNVKESILKEIPTAKIDVMQFDLSSMASVRKFASEYISSGLPLNLLINNAGVMA 120

Query: 502  TPFMLSQDNIEMQFATNHIGHFLLTNLLLETMKNTAQKDNVEGRIVNLSSEAHRHPYREG 681
            TPFMLSQDNIE QFATNH+GHFLLT+LLLETMKNTA++ + EGRIVN+SS  HR  YREG
Sbjct: 121  TPFMLSQDNIERQFATNHVGHFLLTDLLLETMKNTARESSREGRIVNVSSAGHRFTYREG 180

Query: 682  IRFDKINDKPGYSTIYAYGQSKLANILHSNELTRRLKEEGVQITANSLHPGAIDTDLLRH 861
            IRFDK+ND+ GY++I AYGQSKLANILH+ EL RRLKE+GV I+ NSLHPGAIDT+LLR+
Sbjct: 181  IRFDKLNDEAGYNSILAYGQSKLANILHAGELARRLKEDGVDISVNSLHPGAIDTNLLRY 240

Query: 862  HSIINGIVKAVGKYFIKDIPQGAATTCYVALHPQVKGVSGEYFQDSNIGNPTPLAKDVDL 1041
            HS+INGIV  V KY IK++ QGAATTCYVALHPQVKGV+GEYF DSNI  PT  AKD DL
Sbjct: 241  HSVINGIVSLVAKYVIKNVQQGAATTCYVALHPQVKGVTGEYFSDSNIATPTSQAKDADL 300

Query: 1042 AKKLWDYSMSLTS 1080
            AK+LWD+S+ LT+
Sbjct: 301  AKRLWDFSVRLTN 313


>ref|XP_002513680.1| short-chain dehydrogenase, putative [Ricinus communis]
            gi|223547588|gb|EEF49083.1| short-chain dehydrogenase,
            putative [Ricinus communis]
          Length = 313

 Score =  480 bits (1235), Expect = e-133
 Identities = 235/313 (75%), Positives = 274/313 (87%)
 Frame = +1

Query: 142  MWFFNKNGPSGFSSSSTAEEVTQGIDGTGLTAIVTGSSTGIGAETARVLSLRGVHVVIAV 321
            MW F+K  PSGFSSSSTAE+VTQGIDG+GLTAIVTG+S+GIG ET RVL+  GVHVV+AV
Sbjct: 1    MWLFSKKSPSGFSSSSTAEQVTQGIDGSGLTAIVTGASSGIGTETTRVLASCGVHVVMAV 60

Query: 322  RNMVAGVNVKEAIIKENPTAKVDVMELDLSSMASVKKFASEFNSAGLPLNILINNAGIMA 501
            RN+V+G NVKE IIKE PTAKVD MELDLSSMASV+KFAS+FNS+GLPLNILINNAG+MA
Sbjct: 61   RNLVSGRNVKETIIKEIPTAKVDAMELDLSSMASVRKFASDFNSSGLPLNILINNAGVMA 120

Query: 502  TPFMLSQDNIEMQFATNHIGHFLLTNLLLETMKNTAQKDNVEGRIVNLSSEAHRHPYREG 681
            TPFMLS+DNIE+QFATNH+GHFLLTNLLL+TMK TA + N EGRIVN+SSEAHR+ Y EG
Sbjct: 121  TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTAHQSNREGRIVNVSSEAHRYSYHEG 180

Query: 682  IRFDKINDKPGYSTIYAYGQSKLANILHSNELTRRLKEEGVQITANSLHPGAIDTDLLRH 861
            IRFDKIND+ GYS+  AYGQSKLAN+LH+NELTRRLKE+GV ITANSLHPGAI T+L RH
Sbjct: 181  IRFDKINDRSGYSSFRAYGQSKLANVLHANELTRRLKEDGVNITANSLHPGAIVTNLFRH 240

Query: 862  HSIINGIVKAVGKYFIKDIPQGAATTCYVALHPQVKGVSGEYFQDSNIGNPTPLAKDVDL 1041
             +IING+V  +GK  +K++ QGAATTCYVA+HPQVKG+SGEYF DSN+   +   +DV+L
Sbjct: 241  MNIINGMVNVLGKLVLKNVQQGAATTCYVAMHPQVKGISGEYFSDSNLAKASAHGRDVEL 300

Query: 1042 AKKLWDYSMSLTS 1080
             KKLWD+SM L S
Sbjct: 301  GKKLWDFSMKLVS 313


>ref|XP_002274932.1| PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic isoform 1
            [Vitis vinifera] gi|297742509|emb|CBI34658.3| unnamed
            protein product [Vitis vinifera]
          Length = 315

 Score =  479 bits (1233), Expect = e-133
 Identities = 232/312 (74%), Positives = 273/312 (87%)
 Frame = +1

Query: 142  MWFFNKNGPSGFSSSSTAEEVTQGIDGTGLTAIVTGSSTGIGAETARVLSLRGVHVVIAV 321
            MW F + GPSGFS+ STAEEV QGIDG GLTA+VTG+S+GIG ET+RVL+L GVHV++AV
Sbjct: 1    MWIFGRKGPSGFSACSTAEEVAQGIDGNGLTAVVTGASSGIGTETSRVLALHGVHVIMAV 60

Query: 322  RNMVAGVNVKEAIIKENPTAKVDVMELDLSSMASVKKFASEFNSAGLPLNILINNAGIMA 501
            RN+ AG NVKE I+KE PTAKVDVMELDLSS+ SV+KFASE+ S GLPLN+LINNAG+MA
Sbjct: 61   RNVDAGRNVKETILKEIPTAKVDVMELDLSSLPSVRKFASEYKSLGLPLNLLINNAGVMA 120

Query: 502  TPFMLSQDNIEMQFATNHIGHFLLTNLLLETMKNTAQKDNVEGRIVNLSSEAHRHPYREG 681
            TPF+LS DNIE+QFATNH+GHFLLTNLLLETMKNTA++   EGRIVN+SSE HR PY EG
Sbjct: 121  TPFLLSHDNIELQFATNHLGHFLLTNLLLETMKNTARESGREGRIVNVSSEGHRFPYSEG 180

Query: 682  IRFDKINDKPGYSTIYAYGQSKLANILHSNELTRRLKEEGVQITANSLHPGAIDTDLLRH 861
            I FDKIND+  Y+++YAYGQSKLANILH+NEL +RL+EEGV+ITANSLHPGAI T+LLR+
Sbjct: 181  ICFDKINDESAYNSVYAYGQSKLANILHANELAKRLQEEGVEITANSLHPGAIATNLLRY 240

Query: 862  HSIINGIVKAVGKYFIKDIPQGAATTCYVALHPQVKGVSGEYFQDSNIGNPTPLAKDVDL 1041
            HS ++GIV  VGKY +K+IPQGAATTCYVALHPQVKGVSGEYF DSNI  P+   KD +L
Sbjct: 241  HSFLDGIVNMVGKYVLKNIPQGAATTCYVALHPQVKGVSGEYFADSNIAKPSSKGKDAEL 300

Query: 1042 AKKLWDYSMSLT 1077
             KKLW++S+SLT
Sbjct: 301  GKKLWEFSISLT 312


>gb|AFK34836.1| unknown [Lotus japonicus]
          Length = 315

 Score =  478 bits (1231), Expect = e-132
 Identities = 230/313 (73%), Positives = 275/313 (87%)
 Frame = +1

Query: 142  MWFFNKNGPSGFSSSSTAEEVTQGIDGTGLTAIVTGSSTGIGAETARVLSLRGVHVVIAV 321
            MW F   GPSGFS+SSTA++VTQGIDGTGLTAI+TG+S+G+G ET R+L+LRGVHVV+AV
Sbjct: 1    MWIFGWKGPSGFSASSTADQVTQGIDGTGLTAIITGASSGLGLETTRILALRGVHVVMAV 60

Query: 322  RNMVAGVNVKEAIIKENPTAKVDVMELDLSSMASVKKFASEFNSAGLPLNILINNAGIMA 501
            RN+  G++VKE ++KE P AK+DVMELDLSSMASV+KFA++FNS+GLPLNILINNAG+MA
Sbjct: 61   RNVSTGMDVKETMLKEIPAAKIDVMELDLSSMASVRKFAADFNSSGLPLNILINNAGVMA 120

Query: 502  TPFMLSQDNIEMQFATNHIGHFLLTNLLLETMKNTAQKDNVEGRIVNLSSEAHRHPYREG 681
            TPFMLSQDNIE+QFATNH+GHFLLTNLLLETMK T ++ N EGRIV LSSEAHR PY+ G
Sbjct: 121  TPFMLSQDNIELQFATNHLGHFLLTNLLLETMKKTVRECNREGRIVILSSEAHRFPYQGG 180

Query: 682  IRFDKINDKPGYSTIYAYGQSKLANILHSNELTRRLKEEGVQITANSLHPGAIDTDLLRH 861
            I FDKIND+ GYS+ +AYGQSKLANILH+NEL RRLKEEGV IT NSLHPG+I T++LRH
Sbjct: 181  ICFDKINDESGYSSYFAYGQSKLANILHANELARRLKEEGVDITVNSLHPGSIITNILRH 240

Query: 862  HSIINGIVKAVGKYFIKDIPQGAATTCYVALHPQVKGVSGEYFQDSNIGNPTPLAKDVDL 1041
            H  +N +   VGKYF+K++ QGAAT CYVALHPQVKG+SGEYF DSN  +PT LAKD +L
Sbjct: 241  HGYVNAVANMVGKYFLKNVQQGAATQCYVALHPQVKGISGEYFMDSNTASPTNLAKDSEL 300

Query: 1042 AKKLWDYSMSLTS 1080
            AKKLW++S+SLT+
Sbjct: 301  AKKLWEFSLSLTN 313


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