BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00000512
         (1889 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270570.2| PREDICTED: E3 ubiquitin-protein ligase RHF2A...   482   e-133
ref|XP_002277399.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A...   479   e-133
ref|XP_003543397.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A...   446   e-123
ref|XP_003540274.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A...   443   e-122
emb|CBI39117.3| unnamed protein product [Vitis vinifera]              443   e-122

>ref|XP_002270570.2| PREDICTED: E3 ubiquitin-protein ligase RHF2A-like [Vitis vinifera]
          Length = 387

 Score =  482 bits (1240), Expect = e-133
 Identities = 256/391 (65%), Positives = 285/391 (72%), Gaps = 3/391 (0%)
 Frame = +1

Query: 184  MEGSGMDETNKSENHLTSAAAFVEGGIQDACDDACSICLEAFCDSDPSTVTSCKHEFHLQ 363
            ME  GM+E   SENH+TSAAAFVEGG+Q+ACDDACSICLEAFCDSDPST+TSCKHEFHLQ
Sbjct: 1    MEVEGMEEVKNSENHMTSAAAFVEGGVQEACDDACSICLEAFCDSDPSTLTSCKHEFHLQ 60

Query: 364  CILEWCQRSSQCPMCWQSISLKDPTSQELLEAVEHERKLRLIPPRNATIFHHPTLGEFEL 543
            CILEWCQRSSQCPMCWQSISLKDPTSQELLEAVE ER +RL PPR+A IFHHPTLG+FEL
Sbjct: 61   CILEWCQRSSQCPMCWQSISLKDPTSQELLEAVERERNIRLTPPRSA-IFHHPTLGDFEL 119

Query: 544  QHLPVGANDAELEERIIQHL-AAAAMGRSHHMARREGQRSRSTAQGRPQXXXXXXXXXXX 720
            QHLPVG ND ELEERIIQHL AAAAMGR+HH+ARREGQRSRS+A GR             
Sbjct: 120  QHLPVGTNDPELEERIIQHLAAAAAMGRAHHIARREGQRSRSSAHGRSHFLVFSTHPNAT 179

Query: 721  XXXXXXXXPDQGGDNGPAPAT--SPSALFSSRGEEPSQGIPQLLPAWTEHGPTSEPGSSV 894
                      Q G+N PA  T  SPS    + G+EPSQ IPQ     T+H   S   S+V
Sbjct: 180  ASGPVPASLVQVGENEPAAITVASPSIPLPAGGDEPSQEIPQFPSVQTDHMSASASRSAV 239

Query: 895  LASNQSRISPNNRNSAGQSSPINQDRAGPXXXXXXXXXXXXRFSAVSTRYKETITKSTRG 1074
                  RIS NNR+SA QSSP +QDRAGP            R +AVS RYKE+I+KSTRG
Sbjct: 240  ---TPRRISFNNRSSASQSSPPDQDRAGPSELQSFSESLKSRLNAVSMRYKESISKSTRG 296

Query: 1075 WKERLFSRNTSMSDLSSEVKREVNAGIASVSRLMERLDTRENTKVAGPSESNNSDDPVTE 1254
            WKERLFSRN SM+DL SEV+REVNAGIASVSR+MERLDTREN      S S++  D VTE
Sbjct: 297  WKERLFSRNNSMADLGSEVRREVNAGIASVSRMMERLDTRENNGAGQASVSSHLADSVTE 356

Query: 1255 SDSPRNAESRARNPLTDSNTSPSCATSSGQN 1347
              +    E+RA NPL DSNT  +CA SSG N
Sbjct: 357  QSNQNERETRAENPLNDSNTPAACAASSGSN 387


>ref|XP_002277399.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A [Vitis vinifera]
            gi|296084011|emb|CBI24399.3| unnamed protein product
            [Vitis vinifera]
          Length = 393

 Score =  479 bits (1234), Expect = e-133
 Identities = 252/393 (64%), Positives = 290/393 (73%), Gaps = 5/393 (1%)
 Frame = +1

Query: 184  MEGSGMDETNKSENHLTSAAAFVEGGIQDACDDACSICLEAFCDSDPSTVTSCKHEFHLQ 363
            ME  GM+E+NKSE HLTSAAAFVEGGIQ+ACDDACSICLEAFCDSDPSTVTSCKHEFHLQ
Sbjct: 1    MEAPGMEESNKSECHLTSAAAFVEGGIQEACDDACSICLEAFCDSDPSTVTSCKHEFHLQ 60

Query: 364  CILEWCQRSSQCPMCWQSISLKDPTSQELLEAVEHERKLRLIPPRNATIFHHPTLGEFEL 543
            CILEWCQRSSQCPMCWQ ISLKDPTSQELLEAVE ER  R  P RNATIFHHPTLG+FEL
Sbjct: 61   CILEWCQRSSQCPMCWQPISLKDPTSQELLEAVERERTFRFNPSRNATIFHHPTLGDFEL 120

Query: 544  QHLPVGANDAELEERIIQHL-AAAAMGRSHHMARREGQRSRSTAQGRPQXXXXXXXXXXX 720
            QHLPVGANDAELEERIIQHL AAAAMGR+ H+ARREGQR+RS+AQGRPQ           
Sbjct: 121  QHLPVGANDAELEERIIQHLAAAAAMGRARHIARREGQRTRSSAQGRPQFLVFSAHPSTP 180

Query: 721  XXXXXXXXPDQGGDNGPAPATS---PSALFSSRGEEPSQGIPQLLPAWTEHGPTSEPGSS 891
                    P Q G++ PAPA +   PS+L ++ GEE S+     L +  E    S  GS 
Sbjct: 181  QAGPASSSPAQRGEDEPAPAITAAMPSSLPTAVGEESSRLTTSQLSSQAEEITASASGSI 240

Query: 892  VLASNQSRISPNNRNSAGQSSPINQDRAGPXXXXXXXXXXXXRFSAVSTRYKETITKSTR 1071
            +  +NQ   S NNR S GQS P  QD+AGP            RF+AVS RYKE+I+KSTR
Sbjct: 241  IHTTNQHGTSSNNRRSPGQSLPSGQDKAGPSEFQSFSETLKSRFNAVSMRYKESISKSTR 300

Query: 1072 GWKERLFSRNTSMSDLSSEVKREVNAGIASVSRLMERLDTRENTKVAGPSESNNSDDPVT 1251
            GWKERLFSRNTSM+D+ S+V+REVNAGIA+VSR+ME L+TR+N++    S S++S+D  +
Sbjct: 301  GWKERLFSRNTSMADIGSDVRREVNAGIATVSRMMEHLETRDNSRTTPSSVSDSSEDTSS 360

Query: 1252 ES-DSPRNAESRARNPLTDSNTSPSCATSSGQN 1347
             S    R AE+ A NPL D+N   SCA SSG N
Sbjct: 361  PSLGDQRMAETSAHNPLGDTNVQASCAASSGTN 393


>ref|XP_003543397.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A-like [Glycine max]
          Length = 398

 Score =  446 bits (1148), Expect = e-123
 Identities = 242/400 (60%), Positives = 279/400 (69%), Gaps = 12/400 (3%)
 Frame = +1

Query: 184  MEGSGMDETN------KSENHLTSAAAFVEGGIQDACDDACSICLEAFCDSDPSTVTSCK 345
            MEG+GM+E N      KSE HLTSAAAFVEGGIQDACDDACSICLEAFCDSDPSTVTSCK
Sbjct: 1    MEGAGMEENNIINDDNKSEAHLTSAAAFVEGGIQDACDDACSICLEAFCDSDPSTVTSCK 60

Query: 346  HEFHLQCILEWCQRSSQCPMCWQSISLKDPTSQELLEAVEHERKLRLIPPRNATIFHHPT 525
            HEFHLQCILEWCQRSSQCPMCWQ ISLKDPTSQELLEAVE ER  R  P RNATIFHHPT
Sbjct: 61   HEFHLQCILEWCQRSSQCPMCWQPISLKDPTSQELLEAVERERNFRFNPSRNATIFHHPT 120

Query: 526  LGEFELQHLPVGANDAELEERIIQHL-AAAAMGRSHHMARREGQRSRSTAQGRPQXXXXX 702
            LG+FELQHLPVGA+DA+LEERIIQHL AAAAMGR+ H+ARREGQR+RS+AQGR       
Sbjct: 121  LGDFELQHLPVGASDADLEERIIQHLAAAAAMGRARHVARREGQRNRSSAQGRQHFLVFS 180

Query: 703  XXXXXXXXXXXXXXPDQGGDNGPAPATSPSAL--FSSRGEEPSQGIPQLL-PAWTEHGPT 873
                          P Q GD+ P P    + L    + GEE SQ  P L+ P   E    
Sbjct: 181  THPNSPPMAPASSSPSQRGDDEPTPTIDVANLSPTPATGEESSQ--PTLVSPVQAEQVSA 238

Query: 874  SEPGSSVLASNQSRISPNNRNSAGQSSPINQDRAGPXXXXXXXXXXXXRFSAVSTRYKET 1053
            S  G++ LA++    S NNR S  QSSP +QDRAGP            + +AVSTRYKE+
Sbjct: 239  SGSGTTALATDHQGSSYNNRRSPNQSSPSSQDRAGPSELQSFSESLKSKLNAVSTRYKES 298

Query: 1054 ITKSTRGWKERLFSRNTSMSDLSSEVKREVNAGIASVSRLMERLDTRENTKVAGPSESNN 1233
            I+KSTRGWKER FSRN +MSDL SEV+REVNAGIA+VSR+MERL+TR+N +    S  +N
Sbjct: 299  ISKSTRGWKERWFSRNNTMSDLGSEVRREVNAGIATVSRMMERLETRDNNRSNSNSAPSN 358

Query: 1234 SDDPVTE--SDSPRNAESRARNPLTDSNTSPSCATSSGQN 1347
             +D   +  +D    A +   + + D+NT  SCA  S  N
Sbjct: 359  IEDGSVQGSNDQTLTAGNEGGSLVRDNNTKASCAAGSSSN 398


>ref|XP_003540274.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A-like [Glycine max]
          Length = 401

 Score =  443 bits (1139), Expect = e-122
 Identities = 240/402 (59%), Positives = 277/402 (68%), Gaps = 14/402 (3%)
 Frame = +1

Query: 184  MEGSGMDETN---------KSENHLTSAAAFVEGGIQDACDDACSICLEAFCDSDPSTVT 336
            MEG+GM+E N         KSE HLTSAAAFVEGGIQDACDDACSICLEAFCDSDPSTVT
Sbjct: 1    MEGAGMEENNIINDDDNNNKSEAHLTSAAAFVEGGIQDACDDACSICLEAFCDSDPSTVT 60

Query: 337  SCKHEFHLQCILEWCQRSSQCPMCWQSISLKDPTSQELLEAVEHERKLRLIPPRNATIFH 516
            SCKHEFHLQCILEWCQRSSQCPMCWQ ISLKDPTSQELLEAVE ER  R  P RNATIFH
Sbjct: 61   SCKHEFHLQCILEWCQRSSQCPMCWQPISLKDPTSQELLEAVERERNFRFNPSRNATIFH 120

Query: 517  HPTLGEFELQHLPVGANDAELEERIIQHL-AAAAMGRSHHMARREGQRSRSTAQGRPQXX 693
            HPTLG+FELQHLPVGA+DA+LEERIIQHL AAAAMGR+ H+ARREGQR+RS+AQGRP   
Sbjct: 121  HPTLGDFELQHLPVGASDADLEERIIQHLAAAAAMGRARHIARREGQRNRSSAQGRPHFL 180

Query: 694  XXXXXXXXXXXXXXXXXPDQGGDNGPAPATSPSAL--FSSRGEEPSQGIPQLLPAWTEHG 867
                             P Q GD+ P P  + + L    + GEE SQ +  + P   E  
Sbjct: 181  VFSTNPNSPPMAPASSSPSQRGDDEPIPTIAVANLSPTPATGEESSQ-LTLVPPIQAEQV 239

Query: 868  PTSEPGSSVLASNQSRISPNNRNSAGQSSPINQDRAGPXXXXXXXXXXXXRFSAVSTRYK 1047
              S  GS+ LA++    S NNR S  QSSP +QDRAGP            + +AVSTRYK
Sbjct: 240  SASGSGSTALATDHQGSSYNNRRSPNQSSPSSQDRAGPSELQSFSESLKSKLNAVSTRYK 299

Query: 1048 ETITKSTRGWKERLFSRNTSMSDLSSEVKREVNAGIASVSRLMERLDTRENTKVAGPSES 1227
            E+I+KSTRGWKER FSRN +MSDL SEV+REVNAGIA+VSR+MERL+T +N +    S  
Sbjct: 300  ESISKSTRGWKERWFSRNNTMSDLGSEVRREVNAGIATVSRMMERLETSDNNRSNSNSAP 359

Query: 1228 NNSDDPVTESDSPRNAE--SRARNPLTDSNTSPSCATSSGQN 1347
            +N +D   +  + +     +     L D+NT  SCA  S  N
Sbjct: 360  SNIEDGSVQEYNGQTLTPGNEGDGLLRDNNTKASCAAGSSSN 401


>emb|CBI39117.3| unnamed protein product [Vitis vinifera]
          Length = 391

 Score =  443 bits (1139), Expect = e-122
 Identities = 236/351 (67%), Positives = 260/351 (74%), Gaps = 3/351 (0%)
 Frame = +1

Query: 184  MEGSGMDETNKSENHLTSAAAFVEGGIQDACDDACSICLEAFCDSDPSTVTSCKHEFHLQ 363
            ME  GM+E   SENH+TSAAAFVEGG+Q+ACDDACSICLEAFCDSDPST+TSCKHEFHLQ
Sbjct: 1    MEVEGMEEVKNSENHMTSAAAFVEGGVQEACDDACSICLEAFCDSDPSTLTSCKHEFHLQ 60

Query: 364  CILEWCQRSSQCPMCWQSISLKDPTSQELLEAVEHERKLRLIPPRNATIFHHPTLGEFEL 543
            CILEWCQRSSQCPMCWQSISLKDPTSQELLEAVE ER +RL PPR+A IFHHPTLG+FEL
Sbjct: 61   CILEWCQRSSQCPMCWQSISLKDPTSQELLEAVERERNIRLTPPRSA-IFHHPTLGDFEL 119

Query: 544  QHLPVGANDAELEERIIQHL-AAAAMGRSHHMARREGQRSRSTAQGRPQXXXXXXXXXXX 720
            QHLPVG ND ELEERIIQHL AAAAMGR+HH+ARREGQRSRS+A GR             
Sbjct: 120  QHLPVGTNDPELEERIIQHLAAAAAMGRAHHIARREGQRSRSSAHGRSHFLVFSTHPNAT 179

Query: 721  XXXXXXXXPDQGGDNGPAPAT--SPSALFSSRGEEPSQGIPQLLPAWTEHGPTSEPGSSV 894
                      Q G+N PA  T  SPS    + G+EPSQ IPQ     T+H   S   S+V
Sbjct: 180  ASGPVPASLVQVGENEPAAITVASPSIPLPAGGDEPSQEIPQFPSVQTDHMSASASRSAV 239

Query: 895  LASNQSRISPNNRNSAGQSSPINQDRAGPXXXXXXXXXXXXRFSAVSTRYKETITKSTRG 1074
                  RIS NNR+SA QSSP +QDRAGP            R +AVS RYKE+I+KSTRG
Sbjct: 240  ---TPRRISFNNRSSASQSSPPDQDRAGPSELQSFSESLKSRLNAVSMRYKESISKSTRG 296

Query: 1075 WKERLFSRNTSMSDLSSEVKREVNAGIASVSRLMERLDTRENTKVAGPSES 1227
            WKERLFSRN SM+DL SEV+REVNAGIASVSR+MERLDTREN      S S
Sbjct: 297  WKERLFSRNNSMADLGSEVRREVNAGIASVSRMMERLDTRENNGAGQASVS 347