BLASTX nr result

ID: Cimicifuga21_contig00000510 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00000510
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268875.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1...   106   2e-21
dbj|BAK07097.1| predicted protein [Hordeum vulgare subsp. vulgare]    105   3e-21
ref|XP_003575171.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1...   101   7e-20
ref|NP_001173027.1| Os02g0564200 [Oryza sativa Japonica Group] g...   100   2e-19
gb|ACG33942.1| hypothetical protein [Zea mays]                        100   2e-19

>ref|XP_002268875.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex
           subunit 3-B [Vitis vinifera]
          Length = 70

 Score =  106 bits (265), Expect = 2e-21
 Identities = 48/56 (85%), Positives = 51/56 (91%)
 Frame = -2

Query: 219 MAKQLGPTGEFFKRRDEWRKHPMVGNQLRHATPGLGIAIVAFSIYLVGEAAYNKFY 52
           M K LGPTGEFF+RRDEWRKHPM+  QLRHATPGLGIA+VAFSIYLVGEAAYNK Y
Sbjct: 1   MGKPLGPTGEFFRRRDEWRKHPMLNKQLRHATPGLGIAVVAFSIYLVGEAAYNKLY 56


>dbj|BAK07097.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 78

 Score =  105 bits (263), Expect = 3e-21
 Identities = 52/70 (74%), Positives = 56/70 (80%), Gaps = 3/70 (4%)
 Frame = -2

Query: 252 EKFEYCVREKRMA---KQLGPTGEFFKRRDEWRKHPMVGNQLRHATPGLGIAIVAFSIYL 82
           E+ E C   + MA   K L  TGEFF+RRDEWRKHPMVGNQLRHATPGLGIAIVAF IYL
Sbjct: 1   EREEECTAAEAMATGGKGLNATGEFFRRRDEWRKHPMVGNQLRHATPGLGIAIVAFGIYL 60

Query: 81  VGEAAYNKFY 52
           VGEAAYN+ Y
Sbjct: 61  VGEAAYNRLY 70


>ref|XP_003575171.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex
           subunit 3-B-like isoform 1 [Brachypodium distachyon]
           gi|357149612|ref|XP_003575172.1| PREDICTED: NADH
           dehydrogenase [ubiquinone] 1 beta subcomplex subunit
           3-B-like isoform 2 [Brachypodium distachyon]
          Length = 66

 Score =  101 bits (251), Expect = 7e-20
 Identities = 46/54 (85%), Positives = 49/54 (90%)
 Frame = -2

Query: 213 KQLGPTGEFFKRRDEWRKHPMVGNQLRHATPGLGIAIVAFSIYLVGEAAYNKFY 52
           K L  TGEFF+RRDEWR+HPMVGNQLRHATPGLGIAIVAF IYLVGEAAYN+ Y
Sbjct: 6   KGLNATGEFFRRRDEWRRHPMVGNQLRHATPGLGIAIVAFGIYLVGEAAYNRLY 59


>ref|NP_001173027.1| Os02g0564200 [Oryza sativa Japonica Group]
           gi|46390154|dbj|BAD15588.1| unknown protein [Oryza
           sativa Japonica Group] gi|46390350|dbj|BAD15815.1|
           unknown protein [Oryza sativa Japonica Group]
           gi|125539926|gb|EAY86321.1| hypothetical protein
           OsI_07695 [Oryza sativa Indica Group]
           gi|125582543|gb|EAZ23474.1| hypothetical protein
           OsJ_07168 [Oryza sativa Japonica Group]
           gi|215704134|dbj|BAG92974.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215765172|dbj|BAG86869.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|255671009|dbj|BAH91756.1| Os02g0564200 [Oryza sativa
           Japonica Group]
          Length = 66

 Score =  100 bits (248), Expect = 2e-19
 Identities = 45/54 (83%), Positives = 49/54 (90%)
 Frame = -2

Query: 213 KQLGPTGEFFKRRDEWRKHPMVGNQLRHATPGLGIAIVAFSIYLVGEAAYNKFY 52
           K L  TGEFF+RRD+WR+HPMVGNQLRHATPGLGIAIVAF IYLVGEAAYN+ Y
Sbjct: 4   KGLNATGEFFRRRDDWRRHPMVGNQLRHATPGLGIAIVAFGIYLVGEAAYNRLY 57


>gb|ACG33942.1| hypothetical protein [Zea mays]
          Length = 67

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 45/54 (83%), Positives = 48/54 (88%)
 Frame = -2

Query: 213 KQLGPTGEFFKRRDEWRKHPMVGNQLRHATPGLGIAIVAFSIYLVGEAAYNKFY 52
           K L  TGEFF+RRDEWR+HPM GNQLRHATPGLGIAIVAF IYLVGEAAYN+ Y
Sbjct: 6   KGLNATGEFFRRRDEWRRHPMAGNQLRHATPGLGIAIVAFGIYLVGEAAYNRLY 59


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