BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00000475
         (944 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABF17940.1| putative chloroplast chlorophyll a/b-binding prot...   496   e-138
gb|AAA33396.1| light-harvesting chlorophyll a/b protein precurso...   494   e-138
ref|XP_002285646.1| PREDICTED: chlorophyll a-b binding protein 4...   491   e-136
ref|XP_004145734.1| PREDICTED: chlorophyll a-b binding protein, ...   490   e-136
gb|AAB87573.1| chlorophyll a/b binding protein of LHCII type I p...   490   e-136

>gb|ABF17940.1| putative chloroplast chlorophyll a/b-binding protein [Carya
           cathayensis]
          Length = 267

 Score =  496 bits (1276), Expect = e-138
 Identities = 237/253 (93%), Positives = 248/253 (98%), Gaps = 1/253 (0%)
 Frame = -1

Query: 866 GKALKVAPSASEVFGEGRITMRKTGGRPKPVSS-SPWYGPDRVKYLGPFSGEAPSYLTGE 690
           G+A+K+APS+S++ GEGR+TMRKT GRPKPVSS SPWYGPDRVKYLGPFSGE PSYLTGE
Sbjct: 15  GQAIKLAPSSSDLLGEGRVTMRKTAGRPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGE 74

Query: 689 FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFK 510
           FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL+RNGVKFGEAVWFK
Sbjct: 75  FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFK 134

Query: 509 AGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGG 330
           AGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEV DP+YPGG
Sbjct: 135 AGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGG 194

Query: 329 SFDPLGLAEDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNN 150
           SFDPLGLA+DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+ENLADHLADPVNN
Sbjct: 195 SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 254

Query: 149 NAWAYATNFVPGK 111
           NAWAYATNFVPGK
Sbjct: 255 NAWAYATNFVPGK 267


>gb|AAA33396.1| light-harvesting chlorophyll a/b protein precursor [Lemna gibba]
          Length = 266

 Score =  494 bits (1273), Expect = e-138
 Identities = 235/253 (92%), Positives = 250/253 (98%), Gaps = 1/253 (0%)
 Frame = -1

Query: 866 GKALKVAPSASEVFGEGRITMRKTGGRPKPVSS-SPWYGPDRVKYLGPFSGEAPSYLTGE 690
           GKA+K+AP+ASEVFGEGR++MRKT G+PKPVSS SPWYGPDRVKYLGPFSGEAPSYLTGE
Sbjct: 14  GKAVKLAPAASEVFGEGRVSMRKTAGKPKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGE 73

Query: 689 FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFK 510
           F GDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCVFPELL+RNGVKFGEAVWFK
Sbjct: 74  FAGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVFPELLARNGVKFGEAVWFK 133

Query: 509 AGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGG 330
           AG+QIFSEGGLDYLGNPSLVHAQSILAIWATQV+LMGAVEGYR+AGGPLGEVVDPLYPGG
Sbjct: 134 AGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVVLMGAVEGYRVAGGPLGEVVDPLYPGG 193

Query: 329 SFDPLGLAEDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNN 150
           SFDPLGLA+DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENLADHLADPVNN
Sbjct: 194 SFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 253

Query: 149 NAWAYATNFVPGK 111
           NAWA+ATNFVPGK
Sbjct: 254 NAWAFATNFVPGK 266


>ref|XP_002285646.1| PREDICTED: chlorophyll a-b binding protein 40, chloroplastic [Vitis
           vinifera] gi|147833686|emb|CAN73057.1| hypothetical
           protein VITISV_007597 [Vitis vinifera]
          Length = 267

 Score =  491 bits (1263), Expect = e-136
 Identities = 236/253 (93%), Positives = 246/253 (97%), Gaps = 1/253 (0%)
 Frame = -1

Query: 866 GKALKVAPSASEVFGEGRITMRKTGGRPKPVSS-SPWYGPDRVKYLGPFSGEAPSYLTGE 690
           GKALK+APSAS++ GEGR+TMRKTGGR KPVSS SPWYG DRVKYLGPFSGE PSYLTGE
Sbjct: 15  GKALKLAPSASDLLGEGRVTMRKTGGRAKPVSSGSPWYGTDRVKYLGPFSGEPPSYLTGE 74

Query: 689 FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFK 510
           FPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFK
Sbjct: 75  FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 134

Query: 509 AGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGG 330
           AGAQIFSEGGLDYLGNP+LVHAQSILAIWA+QVILMGAVEGYRI GGPLGEVVDPLYPGG
Sbjct: 135 AGAQIFSEGGLDYLGNPNLVHAQSILAIWASQVILMGAVEGYRIGGGPLGEVVDPLYPGG 194

Query: 329 SFDPLGLAEDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNN 150
           SFDPLGLA+DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENLADHLADPVNN
Sbjct: 195 SFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 254

Query: 149 NAWAYATNFVPGK 111
           NAWAYATNFVPGK
Sbjct: 255 NAWAYATNFVPGK 267


>ref|XP_004145734.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
           [Cucumis sativus] gi|449525484|ref|XP_004169747.1|
           PREDICTED: chlorophyll a-b binding protein,
           chloroplastic-like [Cucumis sativus]
          Length = 267

 Score =  490 bits (1262), Expect = e-136
 Identities = 233/253 (92%), Positives = 247/253 (97%), Gaps = 1/253 (0%)
 Frame = -1

Query: 866 GKALKVAPSASEVFGEGRITMRKTGGRPKPVSS-SPWYGPDRVKYLGPFSGEAPSYLTGE 690
           G+A+K++P+AS++ GEGRITMRKT G+PKPVSS SPWYGPDRVKYLGPFSGE PSYLTGE
Sbjct: 15  GQAVKLSPTASDLLGEGRITMRKTAGKPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGE 74

Query: 689 FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFK 510
           FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFK
Sbjct: 75  FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFK 134

Query: 509 AGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGG 330
           AG+QIFSEGGLDYLGNPSLVHAQSILAIWA QV+LMGAVEGYRIAGGPLGE+ DP+YPGG
Sbjct: 135 AGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGG 194

Query: 329 SFDPLGLAEDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNN 150
           SFDPLGLA+DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+ENLADHLADPVNN
Sbjct: 195 SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 254

Query: 149 NAWAYATNFVPGK 111
           NAWAYATNFVPGK
Sbjct: 255 NAWAYATNFVPGK 267


>gb|AAB87573.1| chlorophyll a/b binding protein of LHCII type I precursor [Panax
           ginseng]
          Length = 266

 Score =  490 bits (1261), Expect = e-136
 Identities = 236/252 (93%), Positives = 244/252 (96%)
 Frame = -1

Query: 866 GKALKVAPSASEVFGEGRITMRKTGGRPKPVSSSPWYGPDRVKYLGPFSGEAPSYLTGEF 687
           G A+KVAPS+SE+FG GRI+MRKTG +P   S SPWYGPDRVKYLGPFSGEAPSYLTGEF
Sbjct: 15  GMAVKVAPSSSELFGSGRISMRKTGKKPAASSGSPWYGPDRVKYLGPFSGEAPSYLTGEF 74

Query: 686 PGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKA 507
           PGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL+RNGVKFGEAVWFKA
Sbjct: 75  PGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKA 134

Query: 506 GAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGS 327
           G+QIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGS
Sbjct: 135 GSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGS 194

Query: 326 FDPLGLAEDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNN 147
           FDPLGLAEDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+ENLAD LADPVNNN
Sbjct: 195 FDPLGLAEDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADPLADPVNNN 254

Query: 146 AWAYATNFVPGK 111
           AWAYATNFVPGK
Sbjct: 255 AWAYATNFVPGK 266