BLASTX nr result

ID: Cimicifuga21_contig00000467 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00000467
         (1673 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330746.1| predicted protein [Populus trichocarpa] gi|1...   625   e-176
ref|XP_002862992.1| hypothetical protein ARALYDRAFT_333142 [Arab...   624   e-176
ref|NP_188060.1| putative peroxisomal (S)-2-hydroxy-acid oxidase...   622   e-175
ref|XP_002317470.1| predicted protein [Populus trichocarpa] gi|1...   622   e-175
sp|P05414.1|GOX_SPIOL RecName: Full=Peroxisomal (S)-2-hydroxy-ac...   621   e-175

>ref|XP_002330746.1| predicted protein [Populus trichocarpa] gi|118486606|gb|ABK95141.1|
            unknown [Populus trichocarpa] gi|222872522|gb|EEF09653.1|
            predicted protein [Populus trichocarpa]
          Length = 369

 Score =  625 bits (1612), Expect = e-176
 Identities = 318/366 (86%), Positives = 337/366 (92%)
 Frame = +2

Query: 317  MEITNVEEYEPLAKQRLPKMVYDYYASGAEDQWTLRENRNSFARIQFRPRILIDVTNIDM 496
            MEITNV EYE +AKQ+LPKMVYDYYASGAEDQWTL ENRN+F+RI FRPRILIDV+ IDM
Sbjct: 1    MEITNVTEYEAIAKQKLPKMVYDYYASGAEDQWTLAENRNAFSRILFRPRILIDVSKIDM 60

Query: 497  STTVLGYKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXXXXMVLSSWSTSSVEEVASTG 676
            +TTVLG+KISMPIMIAPTAMQKMAHPEGEY            M LSSW+TSSVEEVASTG
Sbjct: 61   ATTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWATSSVEEVASTG 120

Query: 677  PGLRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPHLTL 856
            PG+RFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPP LTL
Sbjct: 121  PGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTL 180

Query: 857  KNFEGLDLGKMDKANDSGLASYVAGQIDRSLSWKDVQWLQTITKLPIFVKGVMTAEDARL 1036
            KNFEGLDLGKMDKA DSGLASYVAGQIDR+LSWKDV+WLQTITKLPI VKGV+TAEDARL
Sbjct: 181  KNFEGLDLGKMDKAADSGLASYVAGQIDRTLSWKDVEWLQTITKLPILVKGVLTAEDARL 240

Query: 1037 SVQYGAAGIIVSNHGARQLDYVPATITALEEVVKAAQGRIPVFLDGGVRRGTDVFKALAL 1216
            SVQ GAAGIIVSNHGARQLDYVP+TI ALEEVVKAAQGR+PVFLDGGVRRGTDVFKALAL
Sbjct: 241  SVQAGAAGIIVSNHGARQLDYVPSTIMALEEVVKAAQGRVPVFLDGGVRRGTDVFKALAL 300

Query: 1217 GASGIFIGRPVVFSLAVQGEAGVRNVLQMLRDEFELTMALAGCRSLKEITRNHIVTDWDT 1396
            GASGIFIGRPVVFSLA +GE GVR VLQMLR+EFELTMAL+GCRSLKEITR HIV DWD 
Sbjct: 301  GASGIFIGRPVVFSLASEGETGVRKVLQMLREEFELTMALSGCRSLKEITRAHIVADWD- 359

Query: 1397 HPVSRL 1414
            HP++RL
Sbjct: 360  HPLNRL 365


>ref|XP_002862992.1| hypothetical protein ARALYDRAFT_333142 [Arabidopsis lyrata subsp.
            lyrata] gi|297839705|ref|XP_002887734.1| hypothetical
            protein ARALYDRAFT_895734 [Arabidopsis lyrata subsp.
            lyrata] gi|297308786|gb|EFH39251.1| hypothetical protein
            ARALYDRAFT_333142 [Arabidopsis lyrata subsp. lyrata]
            gi|297333575|gb|EFH63993.1| hypothetical protein
            ARALYDRAFT_895734 [Arabidopsis lyrata subsp. lyrata]
          Length = 369

 Score =  624 bits (1609), Expect = e-176
 Identities = 313/366 (85%), Positives = 340/366 (92%)
 Frame = +2

Query: 317  MEITNVEEYEPLAKQRLPKMVYDYYASGAEDQWTLRENRNSFARIQFRPRILIDVTNIDM 496
            MEITNV EYE +AK++LPKMV+DYYASGAEDQWTL+ENRN+F+RI FRPRILIDV+ IDM
Sbjct: 1    MEITNVNEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDM 60

Query: 497  STTVLGYKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXXXXMVLSSWSTSSVEEVASTG 676
            +TTVLG+KISMPIM+APTAMQKMAHPEGEY            M LSSW+TSSVEEVASTG
Sbjct: 61   TTTVLGFKISMPIMVAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWATSSVEEVASTG 120

Query: 677  PGLRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPHLTL 856
            PG+RFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRRE+DIKNRFTLPP+LTL
Sbjct: 121  PGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRRESDIKNRFTLPPYLTL 180

Query: 857  KNFEGLDLGKMDKANDSGLASYVAGQIDRSLSWKDVQWLQTITKLPIFVKGVMTAEDARL 1036
            KNFEGLDLGKMD+ANDSGLASYVAGQIDR+LSWKDVQWLQTITKLPI VKGV+TAEDAR+
Sbjct: 181  KNFEGLDLGKMDEANDSGLASYVAGQIDRTLSWKDVQWLQTITKLPILVKGVLTAEDARM 240

Query: 1037 SVQYGAAGIIVSNHGARQLDYVPATITALEEVVKAAQGRIPVFLDGGVRRGTDVFKALAL 1216
            +VQ GAAGIIVSNHGARQLDYVPATI ALEEVVKAAQG+IPVFLDGGVRRGTDVFKALAL
Sbjct: 241  AVQAGAAGIIVSNHGARQLDYVPATIIALEEVVKAAQGKIPVFLDGGVRRGTDVFKALAL 300

Query: 1217 GASGIFIGRPVVFSLAVQGEAGVRNVLQMLRDEFELTMALAGCRSLKEITRNHIVTDWDT 1396
            GASGIFIGRPVVFSLA +GEAGVR VLQM+R+EFELTMAL+GC SLKEITRNHI+TDWD 
Sbjct: 301  GASGIFIGRPVVFSLAAEGEAGVRKVLQMMREEFELTMALSGCTSLKEITRNHIITDWDA 360

Query: 1397 HPVSRL 1414
             P +RL
Sbjct: 361  -PQARL 365


>ref|NP_188060.1| putative peroxisomal (S)-2-hydroxy-acid oxidase 2 [Arabidopsis
            thaliana] gi|30683149|ref|NP_850584.1| putative
            peroxisomal (S)-2-hydroxy-acid oxidase 2 [Arabidopsis
            thaliana] gi|297829994|ref|XP_002882879.1| hypothetical
            protein ARALYDRAFT_478862 [Arabidopsis lyrata subsp.
            lyrata] gi|13124262|sp|Q9LRR9.1|GLO1_ARATH RecName:
            Full=Peroxisomal (S)-2-hydroxy-acid oxidase GLO1;
            AltName: Full=Glycolate oxidase 1; Short=AtGLO1;
            Short=GOX 1; AltName: Full=Short chain alpha-hydroxy acid
            oxidase GLO1 gi|16226423|gb|AAL16164.1|AF428396_1
            AT3g14420/MOA2_2 [Arabidopsis thaliana]
            gi|11994212|dbj|BAB01334.1| glycolate oxidase
            [Arabidopsis thaliana] gi|15450741|gb|AAK96642.1|
            AT3g14420/MOA2_2 [Arabidopsis thaliana]
            gi|18491119|gb|AAL69528.1| AT3g14420/MOA2_2 [Arabidopsis
            thaliana] gi|297328719|gb|EFH59138.1| hypothetical
            protein ARALYDRAFT_478862 [Arabidopsis lyrata subsp.
            lyrata] gi|332641997|gb|AEE75518.1| putative peroxisomal
            (S)-2-hydroxy-acid oxidase 2 [Arabidopsis thaliana]
            gi|332641999|gb|AEE75520.1| putative peroxisomal
            (S)-2-hydroxy-acid oxidase 2 [Arabidopsis thaliana]
          Length = 367

 Score =  622 bits (1603), Expect = e-175
 Identities = 312/367 (85%), Positives = 339/367 (92%), Gaps = 1/367 (0%)
 Frame = +2

Query: 317  MEITNVEEYEPLAKQRLPKMVYDYYASGAEDQWTLRENRNSFARIQFRPRILIDVTNIDM 496
            MEITNV EY+ +AKQ+LPKMVYDYYASGAEDQWTL+ENRN+FARI FRPRILIDV+ IDM
Sbjct: 1    MEITNVTEYDAIAKQKLPKMVYDYYASGAEDQWTLQENRNAFARILFRPRILIDVSKIDM 60

Query: 497  STTVLGYKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXXXXMVLSSWSTSSVEEVASTG 676
            +TTVLG+KISMPIM+APTAMQKMAHP+GEY            M LSSW+TSSVEEVASTG
Sbjct: 61   TTTVLGFKISMPIMVAPTAMQKMAHPDGEYATARAASAAGTIMTLSSWATSSVEEVASTG 120

Query: 677  PGLRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPHLTL 856
            PG+RFFQLYVYK+RNVV QLVRRAERAGFKAIALTVDTPRLGRRE+DIKNRFTLPP+LTL
Sbjct: 121  PGIRFFQLYVYKNRNVVEQLVRRAERAGFKAIALTVDTPRLGRRESDIKNRFTLPPNLTL 180

Query: 857  KNFEGLDLGKMDKANDSGLASYVAGQIDRSLSWKDVQWLQTITKLPIFVKGVMTAEDARL 1036
            KNFEGLDLGKMD+ANDSGLASYVAGQIDR+LSWKDVQWLQTITKLPI VKGV+T EDAR+
Sbjct: 181  KNFEGLDLGKMDEANDSGLASYVAGQIDRTLSWKDVQWLQTITKLPILVKGVLTGEDARI 240

Query: 1037 SVQYGAAGIIVSNHGARQLDYVPATITALEEVVKAAQGRIPVFLDGGVRRGTDVFKALAL 1216
            ++Q GAAGIIVSNHGARQLDYVPATI+ALEEVVKA QGRIPVFLDGGVRRGTDVFKALAL
Sbjct: 241  AIQAGAAGIIVSNHGARQLDYVPATISALEEVVKATQGRIPVFLDGGVRRGTDVFKALAL 300

Query: 1217 GASGIFIGRPVVFSLAVQGEAGVRNVLQMLRDEFELTMALAGCRSLKEITRNHIVTDWDT 1396
            GASGIFIGRPVVFSLA +GEAGVR VLQMLRDEFELTMAL+GCRSLKEI+RNHI T+WDT
Sbjct: 301  GASGIFIGRPVVFSLAAEGEAGVRKVLQMLRDEFELTMALSGCRSLKEISRNHITTEWDT 360

Query: 1397 -HPVSRL 1414
              P +RL
Sbjct: 361  PRPSARL 367


>ref|XP_002317470.1| predicted protein [Populus trichocarpa] gi|118489504|gb|ABK96554.1|
            unknown [Populus trichocarpa x Populus deltoides]
            gi|222860535|gb|EEE98082.1| predicted protein [Populus
            trichocarpa]
          Length = 369

 Score =  622 bits (1603), Expect = e-175
 Identities = 315/366 (86%), Positives = 339/366 (92%)
 Frame = +2

Query: 317  MEITNVEEYEPLAKQRLPKMVYDYYASGAEDQWTLRENRNSFARIQFRPRILIDVTNIDM 496
            MEITNV EYE +AKQ+LPKMV+DYYASGAEDQWTL ENRN+F+RI FRPRILIDV+ IDM
Sbjct: 1    MEITNVMEYEAIAKQKLPKMVFDYYASGAEDQWTLAENRNAFSRILFRPRILIDVSKIDM 60

Query: 497  STTVLGYKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXXXXMVLSSWSTSSVEEVASTG 676
            +TTVLG+KISMPIMIAPTAMQKMAHPEGEY            M LSSW+TSSVEEVASTG
Sbjct: 61   ATTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWATSSVEEVASTG 120

Query: 677  PGLRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPHLTL 856
            PG+RFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRRE+DIKNRF+LPP LTL
Sbjct: 121  PGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRRESDIKNRFSLPPFLTL 180

Query: 857  KNFEGLDLGKMDKANDSGLASYVAGQIDRSLSWKDVQWLQTITKLPIFVKGVMTAEDARL 1036
            KNFEGLDLGKMDKA+DSGLASYVAGQIDR+LSWKDV+WLQTIT+LPI VKGV+TAEDARL
Sbjct: 181  KNFEGLDLGKMDKADDSGLASYVAGQIDRTLSWKDVEWLQTITRLPILVKGVLTAEDARL 240

Query: 1037 SVQYGAAGIIVSNHGARQLDYVPATITALEEVVKAAQGRIPVFLDGGVRRGTDVFKALAL 1216
            SVQ GAAGIIVSNHGARQLDYVP+TI ALEEVVKAAQGR+PVFLDGGVRRGTDVFKALAL
Sbjct: 241  SVQAGAAGIIVSNHGARQLDYVPSTIMALEEVVKAAQGRVPVFLDGGVRRGTDVFKALAL 300

Query: 1217 GASGIFIGRPVVFSLAVQGEAGVRNVLQMLRDEFELTMALAGCRSLKEITRNHIVTDWDT 1396
            GASGIFIGRPVVFSLA +GEAGVR VLQMLR+EFELTMAL+GCRSLKEITR+HIV DWD 
Sbjct: 301  GASGIFIGRPVVFSLASEGEAGVRKVLQMLREEFELTMALSGCRSLKEITRDHIVADWD- 359

Query: 1397 HPVSRL 1414
            HP +RL
Sbjct: 360  HPRARL 365


>sp|P05414.1|GOX_SPIOL RecName: Full=Peroxisomal (S)-2-hydroxy-acid oxidase; AltName:
            Full=Glycolate oxidase; Short=GOX; AltName: Full=Short
            chain alpha-hydroxy acid oxidase gi|170113|gb|AAA34030.1|
            glycolate oxidase (EC 1.1.3.15) [Spinacia oleracea]
          Length = 369

 Score =  621 bits (1601), Expect = e-175
 Identities = 310/359 (86%), Positives = 332/359 (92%)
 Frame = +2

Query: 317  MEITNVEEYEPLAKQRLPKMVYDYYASGAEDQWTLRENRNSFARIQFRPRILIDVTNIDM 496
            MEITNV EYE +AKQ+LPKMVYDYYASGAEDQWTL ENRN+F+RI FRPRILIDVTNIDM
Sbjct: 1    MEITNVNEYEAIAKQKLPKMVYDYYASGAEDQWTLAENRNAFSRILFRPRILIDVTNIDM 60

Query: 497  STTVLGYKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXXXXMVLSSWSTSSVEEVASTG 676
            +TT+LG+KISMPIMIAPTAMQKMAHPEGEY            M LSSW+TSSVEEVASTG
Sbjct: 61   TTTILGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWATSSVEEVASTG 120

Query: 677  PGLRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPHLTL 856
            PG+RFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRF LPP LTL
Sbjct: 121  PGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPFLTL 180

Query: 857  KNFEGLDLGKMDKANDSGLASYVAGQIDRSLSWKDVQWLQTITKLPIFVKGVMTAEDARL 1036
            KNFEG+DLGKMDKANDSGL+SYVAGQIDRSLSWKDV WLQTIT LPI VKGV+TAEDARL
Sbjct: 181  KNFEGIDLGKMDKANDSGLSSYVAGQIDRSLSWKDVAWLQTITSLPILVKGVITAEDARL 240

Query: 1037 SVQYGAAGIIVSNHGARQLDYVPATITALEEVVKAAQGRIPVFLDGGVRRGTDVFKALAL 1216
            +VQ+GAAGIIVSNHGARQLDYVPATI ALEEVVKAAQGRIPVFLDGGVRRGTDVFKALAL
Sbjct: 241  AVQHGAAGIIVSNHGARQLDYVPATIMALEEVVKAAQGRIPVFLDGGVRRGTDVFKALAL 300

Query: 1217 GASGIFIGRPVVFSLAVQGEAGVRNVLQMLRDEFELTMALAGCRSLKEITRNHIVTDWD 1393
            GA+G+FIGRPVVFSLA +GEAGV+ VLQM+RDEFELTMAL+GCRSLKEI+R+HI  DWD
Sbjct: 301  GAAGVFIGRPVVFSLAAEGEAGVKKVLQMMRDEFELTMALSGCRSLKEISRSHIAADWD 359


Top