BLASTX nr result

ID: Cimicifuga21_contig00000461 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00000461
         (1408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634840.1| PREDICTED: putative quinone-oxidoreductase h...   506   e-141
ref|XP_002300061.1| predicted protein [Populus trichocarpa] gi|2...   489   e-136
ref|XP_002330717.1| predicted protein [Populus trichocarpa] gi|2...   488   e-135
ref|XP_002863281.1| oxidoreductase [Arabidopsis lyrata subsp. ly...   487   e-135
gb|ABK96194.1| unknown [Populus trichocarpa]                          486   e-135

>ref|XP_003634840.1| PREDICTED: putative quinone-oxidoreductase homolog, chloroplastic
            [Vitis vinifera]
          Length = 329

 Score =  506 bits (1302), Expect = e-141
 Identities = 249/328 (75%), Positives = 285/328 (86%)
 Frame = -3

Query: 1277 MAAKLMKAVRFDGYGGGAAALKHVEVPISGPKKDEILLKVEATSLNPIDWKIQKGDLRLV 1098
            MAAKLM+AVR+ GYGGGAA L+H EVP+  P KDE+LLK+EA SLNP+DWKIQKG LR +
Sbjct: 1    MAAKLMRAVRYSGYGGGAAGLEHAEVPVPAPAKDEVLLKLEAASLNPVDWKIQKGMLRPL 60

Query: 1097 LPRKFPYIPATDXXXXXXXXXXXXENIRVGDKVVAVLSHASGGGLAEFAVAQKSLTVKRP 918
             P KFP+IP TD            ++ + GDKVV+VLSH SGGGLAEFAVA+K++TV RP
Sbjct: 61   FPCKFPHIPVTDVAGEVVEVGSGVKDFKAGDKVVSVLSHFSGGGLAEFAVAKKNITVSRP 120

Query: 917  SEVSAVEASGLPIAGLTAHQALTKAAGIKLDGSGTPANILITAASGGVGHYAVQLAKLGN 738
            +EVSA E +GLPIAGLTAHQALT+  GI LDGSG   +ILITAASGGVGHYAVQLAKLGN
Sbjct: 121  AEVSAAEGAGLPIAGLTAHQALTQVVGINLDGSGPQKSILITAASGGVGHYAVQLAKLGN 180

Query: 737  THVTATCGARNIDFVKSLGADEVLDYKTPDGAALKSPSGKKYDAVIHCTTGIPWATFEPN 558
            THVTATCGARNID VKSLGADEVLDYKTPDGAALKSPSG+ +DAVIHC TGIPW+TFEPN
Sbjct: 181  THVTATCGARNIDLVKSLGADEVLDYKTPDGAALKSPSGRTFDAVIHCATGIPWSTFEPN 240

Query: 557  LSESGKVIDLSPSASSLMTFALKKLTFSKKQLVPLVISAKAENLEYLVGLVKEGKLKTVV 378
            LS +GKVID++P+AS+++TFALKKLTFSKKQLVPL++S K ENLE LVGLVKEGKLKTV+
Sbjct: 241  LSTNGKVIDITPNASAMVTFALKKLTFSKKQLVPLLLSPKKENLECLVGLVKEGKLKTVI 300

Query: 377  DSKHPLSKAEDAWAKSLEGHATGKVIVE 294
            DSKHPLSKAEDAWAKS++GHATGK+IVE
Sbjct: 301  DSKHPLSKAEDAWAKSIDGHATGKIIVE 328


>ref|XP_002300061.1| predicted protein [Populus trichocarpa] gi|222847319|gb|EEE84866.1|
            predicted protein [Populus trichocarpa]
          Length = 335

 Score =  489 bits (1258), Expect = e-136
 Identities = 243/334 (72%), Positives = 276/334 (82%), Gaps = 6/334 (1%)
 Frame = -3

Query: 1277 MAAKLMKAVRFDGYGGGAAALKHVEVPISGPKKDEILLKVEATSLNPIDWKIQKGDLRLV 1098
            MA KLM AV++  YGGGAA LKHVEVP+   K+DE+LLK+EATSLNP+DWK+QKG LR +
Sbjct: 1    MAGKLMHAVQYSTYGGGAAGLKHVEVPVPSAKRDEVLLKLEATSLNPVDWKMQKGLLRPL 60

Query: 1097 LPRKFPYIPAT------DXXXXXXXXXXXXENIRVGDKVVAVLSHASGGGLAEFAVAQKS 936
            LPR+FPYIP T      D             N + GDKVVA+LSH SGGGLAEF VA+KS
Sbjct: 61   LPRRFPYIPETFVATGADVAGEVVEVGPGVTNFKTGDKVVAILSHISGGGLAEFVVAKKS 120

Query: 935  LTVKRPSEVSAVEASGLPIAGLTAHQALTKAAGIKLDGSGTPANILITAASGGVGHYAVQ 756
            L V RP EVSA E +GLP+AGLTAHQA+T++AG+KLDGSG   NILITAASGGVGHYAVQ
Sbjct: 121  LPVARPPEVSAAEGAGLPVAGLTAHQAVTQSAGVKLDGSGNQKNILITAASGGVGHYAVQ 180

Query: 755  LAKLGNTHVTATCGARNIDFVKSLGADEVLDYKTPDGAALKSPSGKKYDAVIHCTTGIPW 576
            LAKLGNTHVTATCGARNI+FVKSLGADEVLDYKTP+GAALKSPSGKKYDAVIHC  GIPW
Sbjct: 181  LAKLGNTHVTATCGARNIEFVKSLGADEVLDYKTPEGAALKSPSGKKYDAVIHCAAGIPW 240

Query: 575  ATFEPNLSESGKVIDLSPSASSLMTFALKKLTFSKKQLVPLVISAKAENLEYLVGLVKEG 396
            +TFEPNLS +GKVID++P  S+ M  A KKLTFSKKQLVPL++    ENL YLV LVKEG
Sbjct: 241  STFEPNLSANGKVIDITPGPSAFMASAFKKLTFSKKQLVPLLLIPNGENLNYLVNLVKEG 300

Query: 395  KLKTVVDSKHPLSKAEDAWAKSLEGHATGKVIVE 294
            KLKTV+DSKHPLS+AEDAWAK ++GHATGK+IVE
Sbjct: 301  KLKTVIDSKHPLSRAEDAWAKIIDGHATGKIIVE 334


>ref|XP_002330717.1| predicted protein [Populus trichocarpa] gi|222872493|gb|EEF09624.1|
            predicted protein [Populus trichocarpa]
          Length = 329

 Score =  488 bits (1255), Expect = e-135
 Identities = 244/328 (74%), Positives = 280/328 (85%)
 Frame = -3

Query: 1277 MAAKLMKAVRFDGYGGGAAALKHVEVPISGPKKDEILLKVEATSLNPIDWKIQKGDLRLV 1098
            MA KLM A+++D YGGGAA LKHVEVP+   KKDE+LLK+EATSLNP D++IQKG +R  
Sbjct: 1    MAGKLMHALQYDSYGGGAAGLKHVEVPVPSAKKDEVLLKLEATSLNPYDFRIQKGVVRPF 60

Query: 1097 LPRKFPYIPATDXXXXXXXXXXXXENIRVGDKVVAVLSHASGGGLAEFAVAQKSLTVKRP 918
            LPR FPYIP  D            E+ + GDKVVAVLS +SGGGLAEFAVA+KSL+V RP
Sbjct: 61   LPRSFPYIPGLDIAGEVVAVGPGVEDFKTGDKVVAVLSGSSGGGLAEFAVAKKSLSVARP 120

Query: 917  SEVSAVEASGLPIAGLTAHQALTKAAGIKLDGSGTPANILITAASGGVGHYAVQLAKLGN 738
             EVSA EA+GLPIAGL A++ALT+ AG+KLDGSG   NILITAASGGVGHYAVQLAKLGN
Sbjct: 121  PEVSAAEAAGLPIAGLAAYEALTQCAGVKLDGSGIQKNILITAASGGVGHYAVQLAKLGN 180

Query: 737  THVTATCGARNIDFVKSLGADEVLDYKTPDGAALKSPSGKKYDAVIHCTTGIPWATFEPN 558
            T+VTATCGARNI+FVK LGADEVLDYKTP+GAALKSPSGKKYDAVIHC  GIPW+TFEPN
Sbjct: 181  TYVTATCGARNIEFVKDLGADEVLDYKTPEGAALKSPSGKKYDAVIHCALGIPWSTFEPN 240

Query: 557  LSESGKVIDLSPSASSLMTFALKKLTFSKKQLVPLVISAKAENLEYLVGLVKEGKLKTVV 378
            LSE+GKVI LSP  S+++TFA+KKLTFSKKQL+PL+I+ K ENL+ LV LVKEGKLKTV+
Sbjct: 241  LSENGKVIHLSPGPSAMITFAVKKLTFSKKQLMPLIITPKGENLKCLVNLVKEGKLKTVI 300

Query: 377  DSKHPLSKAEDAWAKSLEGHATGKVIVE 294
            DSKHPLSKAEDAWAK ++GHATGK+IVE
Sbjct: 301  DSKHPLSKAEDAWAKGIDGHATGKIIVE 328


>ref|XP_002863281.1| oxidoreductase [Arabidopsis lyrata subsp. lyrata]
            gi|297309115|gb|EFH39540.1| oxidoreductase [Arabidopsis
            lyrata subsp. lyrata]
          Length = 329

 Score =  487 bits (1254), Expect = e-135
 Identities = 238/328 (72%), Positives = 278/328 (84%)
 Frame = -3

Query: 1277 MAAKLMKAVRFDGYGGGAAALKHVEVPISGPKKDEILLKVEATSLNPIDWKIQKGDLRLV 1098
            MA KLM A+++D YGGGAAALKHV+VP+  PK +E+ LK+EATSLNP+DWKIQKG +R  
Sbjct: 1    MAGKLMHALQYDSYGGGAAALKHVQVPVPTPKSNEVCLKLEATSLNPVDWKIQKGMIRPF 60

Query: 1097 LPRKFPYIPATDXXXXXXXXXXXXENIRVGDKVVAVLSHASGGGLAEFAVAQKSLTVKRP 918
            LPRKFP IPATD            +N + GDKVVAVLSH  GGGLAEFAVA + LTVKRP
Sbjct: 61   LPRKFPCIPATDVAGEVVEVGSGVKNFKAGDKVVAVLSHLGGGGLAEFAVASEKLTVKRP 120

Query: 917  SEVSAVEASGLPIAGLTAHQALTKAAGIKLDGSGTPANILITAASGGVGHYAVQLAKLGN 738
             EV A EA+ LP+AGLTA QALT  AG+KLDG+G  ANIL+TAASGGVGHYAVQLAKL N
Sbjct: 121  QEVGAAEAAALPVAGLTALQALTNPAGLKLDGTGKKANILVTAASGGVGHYAVQLAKLAN 180

Query: 737  THVTATCGARNIDFVKSLGADEVLDYKTPDGAALKSPSGKKYDAVIHCTTGIPWATFEPN 558
             HVTATCGARNIDFVKSLGADEVLDYKTP+GA LKSPSGKKYDAV+HC  GIP++TFEPN
Sbjct: 181  AHVTATCGARNIDFVKSLGADEVLDYKTPEGATLKSPSGKKYDAVVHCANGIPFSTFEPN 240

Query: 557  LSESGKVIDLSPSASSLMTFALKKLTFSKKQLVPLVISAKAENLEYLVGLVKEGKLKTVV 378
            LSE+GKVID++P  S++ T+A+KK+T SKKQLVPL++  KAENLE++V L+KEGK+KTV+
Sbjct: 241  LSENGKVIDITPGPSAMWTYAVKKVTMSKKQLVPLLLIPKAENLEFMVNLLKEGKVKTVI 300

Query: 377  DSKHPLSKAEDAWAKSLEGHATGKVIVE 294
            DSKHPLSKAEDAWAKS++GHATGK+IVE
Sbjct: 301  DSKHPLSKAEDAWAKSIDGHATGKIIVE 328


>gb|ABK96194.1| unknown [Populus trichocarpa]
          Length = 329

 Score =  486 bits (1252), Expect = e-135
 Identities = 238/328 (72%), Positives = 272/328 (82%)
 Frame = -3

Query: 1277 MAAKLMKAVRFDGYGGGAAALKHVEVPISGPKKDEILLKVEATSLNPIDWKIQKGDLRLV 1098
            MA KLM AV++  YGGGAA LKHVEVP+   K+DE+LLK+EATSLNP+DWK+Q G LR +
Sbjct: 1    MAGKLMHAVQYSTYGGGAAGLKHVEVPVPSAKRDEVLLKLEATSLNPVDWKMQNGLLRPL 60

Query: 1097 LPRKFPYIPATDXXXXXXXXXXXXENIRVGDKVVAVLSHASGGGLAEFAVAQKSLTVKRP 918
            LP +FPY+P  D             N + GDKVVA+LSH SGGGLAEF VA+K L V RP
Sbjct: 61   LPWRFPYVPGADVAGEVVEVGPGVTNFKTGDKVVAILSHISGGGLAEFVVAKKGLPVARP 120

Query: 917  SEVSAVEASGLPIAGLTAHQALTKAAGIKLDGSGTPANILITAASGGVGHYAVQLAKLGN 738
             EVSA E +GLP+AGLTAHQA+T++AG+KLDGSG   NILITAASGGVGHYAVQLAKLGN
Sbjct: 121  PEVSAAEGAGLPVAGLTAHQAVTQSAGVKLDGSGNQKNILITAASGGVGHYAVQLAKLGN 180

Query: 737  THVTATCGARNIDFVKSLGADEVLDYKTPDGAALKSPSGKKYDAVIHCTTGIPWATFEPN 558
            THVTATCGARNI+FVKSLGADEVLDYKTP+GAALKSPSGKKYDAVIHC  GIPW+TFEPN
Sbjct: 181  THVTATCGARNIEFVKSLGADEVLDYKTPEGAALKSPSGKKYDAVIHCAAGIPWSTFEPN 240

Query: 557  LSESGKVIDLSPSASSLMTFALKKLTFSKKQLVPLVISAKAENLEYLVGLVKEGKLKTVV 378
            LS +GKVID++P  S+ M  A KKLTFSKKQLVPL++    ENL YLV LVKEGKLKTV+
Sbjct: 241  LSANGKVIDITPGLSAYMASAFKKLTFSKKQLVPLLLIPNGENLNYLVNLVKEGKLKTVI 300

Query: 377  DSKHPLSKAEDAWAKSLEGHATGKVIVE 294
            DSKHPLS+AEDAWAK ++GHATGK+IVE
Sbjct: 301  DSKHPLSRAEDAWAKIIDGHATGKIIVE 328


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