BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00000458
         (1878 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266551.2| PREDICTED: CCA tRNA nucleotidyltransferase, ...   725   0.0  
emb|CBI18302.3| unnamed protein product [Vitis vinifera]              717   0.0  
ref|XP_002533879.1| poly(A) polymerase, putative [Ricinus commun...   676   0.0  
ref|XP_002327340.1| predicted protein [Populus trichocarpa] gi|2...   667   0.0  
ref|XP_004171177.1| PREDICTED: CCA tRNA nucleotidyltransferase, ...   655   0.0  

>ref|XP_002266551.2| PREDICTED: CCA tRNA nucleotidyltransferase, mitochondrial [Vitis
            vinifera]
          Length = 564

 Score =  725 bits (1871), Expect = 0.0
 Identities = 371/557 (66%), Positives = 441/557 (79%), Gaps = 5/557 (0%)
 Frame = -1

Query: 1851 CQ--RFLSLAPFKLSSRRTIKFPNFGLKSNLGVLRGFSRRAMASLTEPEPVQVKEKIDLT 1678
            CQ  R L L PF L       FP          L     RAMAS   P  VQV++ IDLT
Sbjct: 14   CQTHRLLQLQPFLLPCSTAFGFPT---------LSPLHCRAMAS--SPPSVQVRDSIDLT 62

Query: 1677 EKEKQIFDRLLQVLRHFNLETQLRVAGGWVRDKLLGKECYDIDIALDNMLGREFCEKVNE 1498
             KE QIF +LLQV+RHF+L TQLRVAGGWVRDKLLGKECYDIDIALD+MLGREFCEK+N+
Sbjct: 63   PKETQIFQKLLQVVRHFSLRTQLRVAGGWVRDKLLGKECYDIDIALDDMLGREFCEKIND 122

Query: 1497 YLTDSGEEKQGIGVIQCNPDQSKHLETARMRLYDIWIDFVNLRSENYSENSRIPTMKFGT 1318
            YL+ +GEEKQGIGVIQCNPDQSKHLETARMRL+D WIDFVNLRSE+YSENSRIPTM+FGT
Sbjct: 123  YLSCTGEEKQGIGVIQCNPDQSKHLETARMRLFDEWIDFVNLRSEDYSENSRIPTMRFGT 182

Query: 1317 AEEDAYRRDLTINSLFYNINTNSIEDLTRRGVADLKSGKIVTPLPPKDTFLDDPLRVLRA 1138
            A+EDAYRRDLTINSLFYNINT+S+ED T RG+ DLKSGKIVTPLPPKDTFLDDPLRVLRA
Sbjct: 183  AKEDAYRRDLTINSLFYNINTSSVEDFTGRGIEDLKSGKIVTPLPPKDTFLDDPLRVLRA 242

Query: 1137 IRFGARFEFVLDKELKEAAANDEVKAAIADKISRERIGHEIDLMISGNEPVKAMAYICDL 958
            IRFGARF F+LD+ELK AA  D+V+AAIADKISRERIGHEIDLMISGNEPVKAM YICDL
Sbjct: 243  IRFGARFGFILDEELKLAAGCDDVRAAIADKISRERIGHEIDLMISGNEPVKAMTYICDL 302

Query: 957  QLFWVVFSPPHESKLSKFEGCDRHCVAYMDAAQSLLKVVGFPTFSDEQRRLYLYGALFLP 778
             LF VVFS P   K +  E CDR C+ Y+DA  +L++++G  TF+DEQRRLYLY ALFLP
Sbjct: 303  LLFSVVFSLPPIVKPAISEECDRLCIGYIDAGWNLIQLIGSSTFNDEQRRLYLYAALFLP 362

Query: 777  LRKSMYADNKAKKVPIVNHIFRNSLKLKASDAETVMKVHVASEEFLSLISSIASN---TI 607
             RK++Y   KA+K+P+VNHI RNSLKL+ASDA+TV+ +H A E+F+SLI  I S     I
Sbjct: 363  FRKTLYEGGKARKIPVVNHIIRNSLKLRASDADTVVSIHCAVEKFISLIPFIESTESIQI 422

Query: 606  EHAKEERRSFHVPDTSRQRIRAGKLLREIKSFWRVSLLISTLISSGDLSLIEAFPKASGE 427
              A+       +P TS+ RI  G LLREIK FWRV+L++STL+   D++      K + +
Sbjct: 423  SEAEWGIEILDLPVTSKLRILTGLLLREIKGFWRVALMVSTLLYPNDINHTRDISKNNFQ 482

Query: 426  LEKCWQLYKRVENAIMELGLDNVWEMKPLVNGKEIMSILELKTGGPQVRIWQDRLLEWQL 247
            L+K  ++++ VENAI+ LGL+ VWE+KPLVNGK+IM++L+LK+GGP VR WQ +L++WQL
Sbjct: 483  LDKRRKVFEMVENAIVGLGLEEVWELKPLVNGKDIMNVLQLKSGGPLVRDWQQKLIQWQL 542

Query: 246  AHPTATAEECLDWMRQE 196
            AHP+ TAEECLDWMRQ+
Sbjct: 543  AHPSGTAEECLDWMRQK 559


>emb|CBI18302.3| unnamed protein product [Vitis vinifera]
          Length = 519

 Score =  717 bits (1851), Expect = 0.0
 Identities = 355/512 (69%), Positives = 426/512 (83%), Gaps = 3/512 (0%)
 Frame = -1

Query: 1722 TEPEPVQVKEKIDLTEKEKQIFDRLLQVLRHFNLETQLRVAGGWVRDKLLGKECYDIDIA 1543
            + P  VQV++ IDLT KE QIF +LLQV+RHF+L TQLRVAGGWVRDKLLGKECYDIDIA
Sbjct: 3    SSPPSVQVRDSIDLTPKETQIFQKLLQVVRHFSLRTQLRVAGGWVRDKLLGKECYDIDIA 62

Query: 1542 LDNMLGREFCEKVNEYLTDSGEEKQGIGVIQCNPDQSKHLETARMRLYDIWIDFVNLRSE 1363
            LD+MLGREFCEK+N+YL+ +GEEKQGIGVIQCNPDQSKHLETARMRL+D WIDFVNLRSE
Sbjct: 63   LDDMLGREFCEKINDYLSCTGEEKQGIGVIQCNPDQSKHLETARMRLFDEWIDFVNLRSE 122

Query: 1362 NYSENSRIPTMKFGTAEEDAYRRDLTINSLFYNINTNSIEDLTRRGVADLKSGKIVTPLP 1183
            +YSENSRIPTM+FGTA+EDAYRRDLTINSLFYNINT+S+ED T RG+ DLKSGKIVTPLP
Sbjct: 123  DYSENSRIPTMRFGTAKEDAYRRDLTINSLFYNINTSSVEDFTGRGIEDLKSGKIVTPLP 182

Query: 1182 PKDTFLDDPLRVLRAIRFGARFEFVLDKELKEAAANDEVKAAIADKISRERIGHEIDLMI 1003
            PKDTFLDDPLRVLRAIRFGARF F+LD+ELK AA  D+V+AAIADKISRERIGHEIDLMI
Sbjct: 183  PKDTFLDDPLRVLRAIRFGARFGFILDEELKLAAGCDDVRAAIADKISRERIGHEIDLMI 242

Query: 1002 SGNEPVKAMAYICDLQLFWVVFSPPHESKLSKFEGCDRHCVAYMDAAQSLLKVVGFPTFS 823
            SGNEPVKAM YICDL LF VVFS P   K +  E CDR C+ Y+DA  +L++++G  TF+
Sbjct: 243  SGNEPVKAMTYICDLLLFSVVFSLPPIVKPAISEECDRLCIGYIDAGWNLIQLIGSSTFN 302

Query: 822  DEQRRLYLYGALFLPLRKSMYADNKAKKVPIVNHIFRNSLKLKASDAETVMKVHVASEEF 643
            DEQRRLYLY ALFLP RK++Y   KA+K+P+VNHI RNSLKL+ASDA+TV+ +H A E+F
Sbjct: 303  DEQRRLYLYAALFLPFRKTLYEGGKARKIPVVNHIIRNSLKLRASDADTVVSIHCAVEKF 362

Query: 642  LSLISSIASN---TIEHAKEERRSFHVPDTSRQRIRAGKLLREIKSFWRVSLLISTLISS 472
            +SLI  I S     I  A+       +P TS+ RI  G LLREIK FWRV+L++STL+  
Sbjct: 363  ISLIPFIESTESIQISEAEWGIEILDLPVTSKLRILTGLLLREIKGFWRVALMVSTLLYP 422

Query: 471  GDLSLIEAFPKASGELEKCWQLYKRVENAIMELGLDNVWEMKPLVNGKEIMSILELKTGG 292
             D++      K + +L+K  ++++ VENAI+ LGL+ VWE+KPLVNGK+IM++L+LK+GG
Sbjct: 423  NDINHTRDISKNNFQLDKRRKVFEMVENAIVGLGLEEVWELKPLVNGKDIMNVLQLKSGG 482

Query: 291  PQVRIWQDRLLEWQLAHPTATAEECLDWMRQE 196
            P VR WQ +L++WQLAHP+ TAEECLDWMRQ+
Sbjct: 483  PLVRDWQQKLIQWQLAHPSGTAEECLDWMRQK 514


>ref|XP_002533879.1| poly(A) polymerase, putative [Ricinus communis]
            gi|223526180|gb|EEF28510.1| poly(A) polymerase, putative
            [Ricinus communis]
          Length = 577

 Score =  676 bits (1743), Expect = 0.0
 Identities = 348/567 (61%), Positives = 434/567 (76%), Gaps = 7/567 (1%)
 Frame = -1

Query: 1839 LSLAPFKLSSRRTIKFPNFGLKS----NLGVLRGFSRRAMASLTEPEPVQVKEKIDLTEK 1672
            L L P   SS     F NF  ++    +  + R FS RAM + T    +QVK+KI+LTE 
Sbjct: 16   LLLPPLLRSSTSAFAFRNFRPETPRYLHSFLRRRFSCRAMGTSTPQAVIQVKDKIELTEI 75

Query: 1671 EKQIFDRLLQVLRHFNLETQLRVAGGWVRDKLLGKECYDIDIALDNMLGREFCEKVNEYL 1492
            EK+IFDRLL  LRHFNL+TQLRVAGGWVRDKLLGK+CYDIDIA+DNMLG EF +KV EYL
Sbjct: 76   EKKIFDRLLNTLRHFNLQTQLRVAGGWVRDKLLGKDCYDIDIAIDNMLGSEFVDKVREYL 135

Query: 1491 TDSGEEKQGIGVIQCNPDQSKHLETARMRLYDIWIDFVNLRSENYSENSRIPTMKFGTAE 1312
              +GEE  G+G+I  NPDQSKHLETARMRL+D+WIDFVNLR E+Y+E+SRIPTMKFGTAE
Sbjct: 136  LSTGEEVGGLGIIPRNPDQSKHLETARMRLFDLWIDFVNLRCEDYTEDSRIPTMKFGTAE 195

Query: 1311 EDAYRRDLTINSLFYNINTNSIEDLTRRGVADLKSGKIVTPLPPKDTFLDDPLRVLRAIR 1132
            EDA+RRDLTINSLFYNINT+S+EDLT RG+ DLK GKIVTPLPPK TFLDDPLRVLRAIR
Sbjct: 196  EDAFRRDLTINSLFYNINTSSVEDLTERGIEDLKFGKIVTPLPPKATFLDDPLRVLRAIR 255

Query: 1131 FGARFEFVLDKELKEAAANDEVKAAIADKISRERIGHEIDLMISGNEPVKAMAYICDLQL 952
            FGARF F+LD+ELKEAAA D+VK A+A KIS+ERIG+EIDLM+SGN+PVKAM YI DL L
Sbjct: 256  FGARFGFILDEELKEAAACDDVKNALAAKISKERIGNEIDLMLSGNQPVKAMTYIGDLTL 315

Query: 951  FWVVFSPPHESKLSKFEGCDRHCVAYMDAAQSLLKVVGFPTFSDEQRRLYLYGALFLPLR 772
            FW++F  P + + +  EGC + C+AY+DA  +L++ +    F+DEQRRL LY ALFLP R
Sbjct: 316  FWIIFGLPPKVEPAVSEGCHKLCIAYLDATWNLIQSIRSSFFTDEQRRLSLYAALFLPFR 375

Query: 771  KSMYADNKAKKVPIVNHIFRNSLKLKASDAETVMKVHVASEEFLSLISSIASNTIEHAKE 592
              +Y + K K VP+VN IF++SLK KASD+ETVMK+H + E+FL++I  + S+      E
Sbjct: 376  NIIYIE-KGKNVPVVNFIFKDSLKQKASDSETVMKIHKSLEKFLNIIPLLTSDDDTQPAE 434

Query: 591  ---ERRSFHVPDTSRQRIRAGKLLREIKSFWRVSLLISTLISSGDLSLIEAFPKASGELE 421
                     VP +++ R+  G LLREIK FWRV+LLIST+I   D+   ++F     EL+
Sbjct: 435  VDWALELIDVPFSAKLRVLTGFLLREIKDFWRVALLISTMIYPADIDSTQSFLDKQFELD 494

Query: 420  KCWQLYKRVENAIMELGLDNVWEMKPLVNGKEIMSILELKTGGPQVRIWQDRLLEWQLAH 241
            K  +L+K VE+AI + GL+ +W++KPLVNGKEIMS+L+LK+GGP VR WQ +LL WQLAH
Sbjct: 495  KRKELFKTVEDAITKQGLEKIWDVKPLVNGKEIMSVLQLKSGGPLVREWQQKLLAWQLAH 554

Query: 240  PTATAEECLDWMRQELKGQTNTKRAKV 160
            PT TAEECLDWM+     +T+ KRA++
Sbjct: 555  PTGTAEECLDWMK-----ETHLKRARI 576


>ref|XP_002327340.1| predicted protein [Populus trichocarpa] gi|222835710|gb|EEE74145.1|
            predicted protein [Populus trichocarpa]
          Length = 528

 Score =  667 bits (1722), Expect = 0.0
 Identities = 338/519 (65%), Positives = 408/519 (78%), Gaps = 3/519 (0%)
 Frame = -1

Query: 1707 VQVKEKIDLTEKEKQIFDRLLQVLRHFNLETQLRVAGGWVRDKLLGKECYDIDIALDNML 1528
            ++VK+KI+L E EKQIFDRL+  LRHFNL T+LRVAGGWVRDKLLGKEC DIDIA+DNML
Sbjct: 14   IEVKDKIELNEVEKQIFDRLVNTLRHFNLNTELRVAGGWVRDKLLGKECCDIDIAIDNML 73

Query: 1527 GREFCEKVNEYLTDSGEEKQGIGVIQCNPDQSKHLETARMRLYDIWIDFVNLRSENYSEN 1348
            G EF +KV EYL  +GEE  G+GVI  NPDQSKHLETARMRL D+WIDFVNLRSE+YSEN
Sbjct: 74   GSEFVDKVREYLLSTGEEAHGVGVIPRNPDQSKHLETARMRLLDLWIDFVNLRSEDYSEN 133

Query: 1347 SRIPTMKFGTAEEDAYRRDLTINSLFYNINTNSIEDLTRRGVADLKSGKIVTPLPPKDTF 1168
            SRIPTM FGTA+EDAYRRDLTINSLFYNINT+S+EDLT RG+ DLKSGKIVTPLPPKDTF
Sbjct: 134  SRIPTMTFGTAKEDAYRRDLTINSLFYNINTSSVEDLTGRGIEDLKSGKIVTPLPPKDTF 193

Query: 1167 LDDPLRVLRAIRFGARFEFVLDKELKEAAANDEVKAAIADKISRERIGHEIDLMISGNEP 988
            LDDPLRVLRAIRFGARF FVL++ELKEAAA D+VK A+  KIS+ERIG EIDLMISGN+P
Sbjct: 194  LDDPLRVLRAIRFGARFGFVLEEELKEAAACDDVKNALKAKISKERIGTEIDLMISGNQP 253

Query: 987  VKAMAYICDLQLFWVVFSPPHESKLSKFEGCDRHCVAYMDAAQSLLKVVGFPTFSDEQRR 808
            VKAM YI DL LFWVVF+   + + +  E C   CVAY+DAA +L+ ++G  +F+ EQRR
Sbjct: 254  VKAMTYIADLTLFWVVFNLHPKVEPTVSEECQGLCVAYLDAAWNLIHLIGGSSFTGEQRR 313

Query: 807  LYLYGALFLPLRKSMYADNKAKKVPIVNHIFRNSLKLKASDAETVMKVHVASEEFLSLIS 628
            L LY ALFLPLR ++Y D K KKVP+VN+IFR+SLK KASD ETV+K+H + E+FL+LI 
Sbjct: 314  LCLYAALFLPLRNTIYKDEKGKKVPVVNYIFRDSLKQKASDPETVIKIHRSLEKFLTLIP 373

Query: 627  SIASNTIEHAKE---ERRSFHVPDTSRQRIRAGKLLREIKSFWRVSLLISTLISSGDLSL 457
             + SN      E       F VP TS+ R+  G LLRE+K FWRV LLIST++   D   
Sbjct: 374  LLTSNDDTQPAEVDMGMELFDVPITSKLRVATGFLLREVKEFWRVGLLISTMLYPSDTDS 433

Query: 456  IEAFPKASGELEKCWQLYKRVENAIMELGLDNVWEMKPLVNGKEIMSILELKTGGPQVRI 277
             + F +   EL++   L+K  E+AI+ LGL+ VW++KPLVNGK+IM++L+LK+GGP V+ 
Sbjct: 434  TQDFLEKKFELDRRKDLFKAAEDAIVNLGLERVWDLKPLVNGKDIMTVLQLKSGGPVVKE 493

Query: 276  WQDRLLEWQLAHPTATAEECLDWMRQELKGQTNTKRAKV 160
            WQ +LL WQ AHP  T EECLDWM+     +T+ KRAK+
Sbjct: 494  WQQKLLAWQFAHPAGTVEECLDWMK-----ETHLKRAKM 527


>ref|XP_004171177.1| PREDICTED: CCA tRNA nucleotidyltransferase, mitochondrial-like
            [Cucumis sativus]
          Length = 577

 Score =  655 bits (1689), Expect = 0.0
 Identities = 342/531 (64%), Positives = 412/531 (77%), Gaps = 8/531 (1%)
 Frame = -1

Query: 1728 SLTEPEP-VQVKEKIDLTEKEKQIFDRLLQVLRHFNLETQLRVAGGWVRDKLLGKECYDI 1552
            +++ P+P VQVK+ I+LTE E++IF RLL  LRHFNL+TQLRVAGGWVRDKLLGK+CYDI
Sbjct: 53   AISSPKPLVQVKDNIELTETEEKIFHRLLGTLRHFNLQTQLRVAGGWVRDKLLGKDCYDI 112

Query: 1551 DIALDNMLGREFCEKVNEYLTDSGEEKQGIGVIQCNPDQSKHLETARMRLYDIWIDFVNL 1372
            DIALDNMLG EF +KV EYL   GEE QG+ VI CNPDQSKHLETARMR++D+WIDFVNL
Sbjct: 113  DIALDNMLGSEFVDKVREYLLTVGEEAQGVAVIPCNPDQSKHLETARMRIFDMWIDFVNL 172

Query: 1371 RSENYSENSRIPT-MKFGTAEEDAYRRDLTINSLFYNINTNSIEDLTRRGVADLKSGKIV 1195
            R E YSENSRIPT  KFGTAEEDAYRRDLTINSLFYNIN + +ED T+RG++DLK GKIV
Sbjct: 173  RCEEYSENSRIPTKQKFGTAEEDAYRRDLTINSLFYNINLSIVEDFTKRGISDLKFGKIV 232

Query: 1194 TPLPPKDTFLDDPLRVLRAIRFGARFEFVLDKELKEAAANDEVKAAIADKISRERIGHEI 1015
            TPLP K TF+DDPLRVLRAIRF ARFEF LD+ELKEAAA +EVKAA+A KISRERIG EI
Sbjct: 233  TPLPAKATFMDDPLRVLRAIRFCARFEFTLDEELKEAAACEEVKAALAAKISRERIGVEI 292

Query: 1014 DLMISGNEPVKAMAYICDLQLFWVVFSPPHESKLSKFEGCDRHCVAYMDAAQSLLKVVGF 835
            DLMI+GN+PVKAM+YI DL LFW VF+ P   +    E C+R CVA +DA  +L++ +  
Sbjct: 293  DLMIAGNQPVKAMSYISDLTLFWTVFTLPSNIEPEISEVCNRLCVACLDATWNLIQHINC 352

Query: 834  PTFSDEQRRLYLYGALFLPLRKSMYADNKAKKVPIVNHIFRNSLKLKASDAETVMKVHVA 655
             TFSDEQ+RL LY +LFLP RK  + D K+KK+PIVN+IFR+SLK KASDAETV+ VH A
Sbjct: 353  FTFSDEQKRLSLYASLFLPFRKFTFKDKKSKKIPIVNYIFRDSLKRKASDAETVVNVHQA 412

Query: 654  SEEFLSLISSIAS------NTIEHAKEERRSFHVPDTSRQRIRAGKLLREIKSFWRVSLL 493
             E+FLSLI  + S      N ++   E      VP TSR R+  G LLREIK FW V+LL
Sbjct: 413  LEKFLSLIPLLVSKEEIQPNGVDWGVE---CADVPATSRIRVLTGLLLREIKDFWPVALL 469

Query: 492  ISTLISSGDLSLIEAFPKASGELEKCWQLYKRVENAIMELGLDNVWEMKPLVNGKEIMSI 313
            ++TL+   D+   +       ELEK  +L+  V N I++LGL+NVWEMKPLVNGKEIM+I
Sbjct: 470  MATLLYPADVDYAQDLLNRHFELEKRKELFDDVYNEIVKLGLENVWEMKPLVNGKEIMNI 529

Query: 312  LELKTGGPQVRIWQDRLLEWQLAHPTATAEECLDWMRQELKGQTNTKRAKV 160
            L+LK GGP VR WQ ++L WQLAHP+ T+EECLDW+R     +T++KR K+
Sbjct: 530  LQLKAGGPLVREWQQKILAWQLAHPSGTSEECLDWIR-----ETHSKRVKL 575