BLASTX nr result

ID: Cimicifuga21_contig00000447 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00000447
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302996.1| predicted protein [Populus trichocarpa] gi|2...    76   3e-12
ref|XP_002305180.1| predicted protein [Populus trichocarpa] gi|2...    75   6e-12
emb|CAN62773.1| hypothetical protein VITISV_028724 [Vitis vinifera]    71   8e-11
ref|XP_002315915.1| predicted protein [Populus trichocarpa] gi|2...    62   5e-08
ref|NP_001235776.1| uncharacterized protein LOC100527161 [Glycin...    60   2e-07

>ref|XP_002302996.1| predicted protein [Populus trichocarpa] gi|222844722|gb|EEE82269.1|
           predicted protein [Populus trichocarpa]
          Length = 138

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 35/68 (51%), Positives = 47/68 (69%), Gaps = 3/68 (4%)
 Frame = -3

Query: 196 FYGSLKRYWRRRQYQRLD---RTSKYTKTIQLGGKQKRTWKIKTLPKLKLGFKIVSPIKL 26
           FYGS KRYWRR++YQR D      K  K  + GG  +R WKIK +PKL++   I SP+KL
Sbjct: 8   FYGSWKRYWRRKRYQRFDGAITARKNIKVTRFGGSPRRVWKIKAVPKLRILKSIASPLKL 67

Query: 25  LAKLRDAY 2
           ++KL++AY
Sbjct: 68  MSKLKNAY 75


>ref|XP_002305180.1| predicted protein [Populus trichocarpa] gi|222848144|gb|EEE85691.1|
           predicted protein [Populus trichocarpa]
          Length = 133

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 37/68 (54%), Positives = 46/68 (67%), Gaps = 3/68 (4%)
 Frame = -3

Query: 196 FYGSLKRYWRRRQYQRLD---RTSKYTKTIQLGGKQKRTWKIKTLPKLKLGFKIVSPIKL 26
           F GS KRYWRR++YQRLD      K T   + GG  +RTWKIK +PKL++   I SP KL
Sbjct: 8   FNGSWKRYWRRKRYQRLDGAITARKNTNVARFGGSPRRTWKIKAVPKLRILKNIASPTKL 67

Query: 25  LAKLRDAY 2
           L KL++AY
Sbjct: 68  LRKLKNAY 75


>emb|CAN62773.1| hypothetical protein VITISV_028724 [Vitis vinifera]
          Length = 113

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 35/60 (58%), Positives = 48/60 (80%), Gaps = 1/60 (1%)
 Frame = -3

Query: 178 RYWRRRQYQRLDRTSKYT-KTIQLGGKQKRTWKIKTLPKLKLGFKIVSPIKLLAKLRDAY 2
           R+WRR +YQRLD  +K   K ++LGGKQ+R W+I+ +PKL L  KI+SP+KLLAKL++AY
Sbjct: 14  RHWRRGKYQRLDVANKRNVKMVRLGGKQRRFWRIRQIPKLHL--KIISPLKLLAKLKNAY 71


>ref|XP_002315915.1| predicted protein [Populus trichocarpa] gi|222864955|gb|EEF02086.1|
           predicted protein [Populus trichocarpa]
          Length = 130

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 33/64 (51%), Positives = 43/64 (67%)
 Frame = -3

Query: 193 YGSLKRYWRRRQYQRLDRTSKYTKTIQLGGKQKRTWKIKTLPKLKLGFKIVSPIKLLAKL 14
           Y ++KRYWRR +YQRL+  SK    I   G  +R WK++ +PKL +  +I SPIKLLAK 
Sbjct: 9   YENVKRYWRRNRYQRLNGASKRKLKIARLGSGRR-WKLRAVPKLHM--EIASPIKLLAKF 65

Query: 13  RDAY 2
            DAY
Sbjct: 66  HDAY 69


>ref|NP_001235776.1| uncharacterized protein LOC100527161 [Glycine max]
           gi|255631688|gb|ACU16211.1| unknown [Glycine max]
          Length = 140

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 34/77 (44%), Positives = 47/77 (61%), Gaps = 11/77 (14%)
 Frame = -3

Query: 199 PFYGSLKRYWRRRQYQRLDRTSKYTKTIQLGGKQ-----------KRTWKIKTLPKLKLG 53
           P YG +KRY RRR+YQRLD     T T   GGK+           +R W+IK +PKL   
Sbjct: 10  PTYGGIKRYLRRRRYQRLDGDGGATAT--TGGKKTKMIRSRRRSPRRQWRIKAIPKLT-- 65

Query: 52  FKIVSPIKLLAKLRDAY 2
           + + SP+K++AKL++AY
Sbjct: 66  WMVRSPLKMMAKLKNAY 82


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