BLASTX nr result

ID: Cimicifuga21_contig00000446 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00000446
         (603 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302996.1| predicted protein [Populus trichocarpa] gi|2...   114   1e-23
ref|XP_002305180.1| predicted protein [Populus trichocarpa] gi|2...   112   6e-23
ref|XP_002526291.1| conserved hypothetical protein [Ricinus comm...   103   2e-20
ref|XP_002315915.1| predicted protein [Populus trichocarpa] gi|2...   103   2e-20
emb|CAN62773.1| hypothetical protein VITISV_028724 [Vitis vinifera]   103   2e-20

>ref|XP_002302996.1| predicted protein [Populus trichocarpa] gi|222844722|gb|EEE82269.1|
           predicted protein [Populus trichocarpa]
          Length = 138

 Score =  114 bits (286), Expect = 1e-23
 Identities = 59/128 (46%), Positives = 85/128 (66%), Gaps = 7/128 (5%)
 Frame = +3

Query: 87  SYHGSLKMHWSRKQYQRLDDTSNSTKTI---RLGGKRKRSWKIKALPKLKLRFKIVSPIK 257
           S++GS K +W RK+YQR D    + K I   R GG  +R WKIKA+PKL++   I SP+K
Sbjct: 7   SFYGSWKRYWRRKRYQRFDGAITARKNIKVTRFGGSPRRVWKIKAVPKLRILKSIASPLK 66

Query: 258 LLRKLRDAYVNMMFRLAGNVGALNGDNFFGAKTAPKAKKIS----KAEEFETKLILEIYK 425
           L+ KL++AY+NMM  +AGNV   +G N FG +  P+ +++      +E FE +L+ EIYK
Sbjct: 67  LMSKLKNAYINMMLGMAGNV---DGTNVFGNRRVPRGRQVKAPNYPSEAFEKRLVYEIYK 123

Query: 426 SLKASREL 449
           +L A+REL
Sbjct: 124 NLLATREL 131


>ref|XP_002305180.1| predicted protein [Populus trichocarpa] gi|222848144|gb|EEE85691.1|
           predicted protein [Populus trichocarpa]
          Length = 133

 Score =  112 bits (279), Expect = 6e-23
 Identities = 58/126 (46%), Positives = 84/126 (66%), Gaps = 6/126 (4%)
 Frame = +3

Query: 90  YHGSLKMHWSRKQYQRLDDT---SNSTKTIRLGGKRKRSWKIKALPKLKLRFKIVSPIKL 260
           ++GS K +W RK+YQRLD       +T   R GG  +R+WKIKA+PKL++   I SP KL
Sbjct: 8   FNGSWKRYWRRKRYQRLDGAITARKNTNVARFGGSPRRTWKIKAVPKLRILKNIASPTKL 67

Query: 261 LRKLRDAYVNMMFRLAGNVGALNGDNFFGAKTAPKAKKISKA---EEFETKLILEIYKSL 431
           LRKL++AY++M+  +AGN    +G + FG K  P+ +++  A   E FE +L+ EIYK+L
Sbjct: 68  LRKLKNAYISMILSVAGNA---DGTHVFGDKRVPRGRQVKAAYPSEAFEKRLVYEIYKNL 124

Query: 432 KASREL 449
            A+REL
Sbjct: 125 LATREL 130


>ref|XP_002526291.1| conserved hypothetical protein [Ricinus communis]
           gi|223534372|gb|EEF36080.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 136

 Score =  103 bits (258), Expect = 2e-20
 Identities = 63/135 (46%), Positives = 88/135 (65%), Gaps = 7/135 (5%)
 Frame = +3

Query: 66  MDIASTNSYHGSLKMHWSRKQYQRLDDTSNST---KTIRLGGKR-KRSWKIKALPKLKLR 233
           M++ S+  Y  +LK  W R++YQRL  ++NS    K IRLGG   +R WK++     KL+
Sbjct: 1   MEMISSACYD-TLKRCWRRRRYQRLHCSTNSKRKLKIIRLGGAATRRIWKLRTTAP-KLQ 58

Query: 234 FKIVSPIKLLRKLRDAYVNMMFRLAGNVGALNGDNFFGAKTAPKAKKISK---AEEFETK 404
           +K++SP+++L    DAYV+MM RLA N+G LNG   FG K   K K+IS     EE +T+
Sbjct: 59  WKLLSPVRILVNFHDAYVDMMIRLANNMGKLNGRGVFGRKKFAKDKQISMVSCGEEVDTR 118

Query: 405 LILEIYKSLKASREL 449
           L+LEIYK L A+REL
Sbjct: 119 LVLEIYKRLVAAREL 133


>ref|XP_002315915.1| predicted protein [Populus trichocarpa] gi|222864955|gb|EEF02086.1|
           predicted protein [Populus trichocarpa]
          Length = 130

 Score =  103 bits (258), Expect = 2e-20
 Identities = 60/132 (45%), Positives = 85/132 (64%), Gaps = 4/132 (3%)
 Frame = +3

Query: 66  MDIASTNSYHGSLKMHWSRKQYQRLDDTSN-STKTIRLGGKRKRSWKIKALPKLKLRFKI 242
           M+I S+  Y  ++K +W R +YQRL+  S    K  RLG  R+  WK++A+PKL +  +I
Sbjct: 1   MEIISSACYE-NVKRYWRRNRYQRLNGASKRKLKIARLGSGRR--WKLRAVPKLHM--EI 55

Query: 243 VSPIKLLRKLRDAYVNMMFRLAGNVGALNGDNFFGAKTAPKAKKI---SKAEEFETKLIL 413
            SPIKLL K  DAY++MM RLA N+G+LN   FF  K   K + I   S  +E +++L+L
Sbjct: 56  ASPIKLLAKFHDAYIDMMLRLATNIGSLNNKGFFRGKKVAKDQHISMVSSGDEVDSRLLL 115

Query: 414 EIYKSLKASREL 449
           EIYK L ASR++
Sbjct: 116 EIYKKLAASRDM 127


>emb|CAN62773.1| hypothetical protein VITISV_028724 [Vitis vinifera]
          Length = 113

 Score =  103 bits (258), Expect = 2e-20
 Identities = 53/100 (53%), Positives = 73/100 (73%), Gaps = 4/100 (4%)
 Frame = +3

Query: 111 HWSRKQYQRLDDTSN-STKTIRLGGKRKRSWKIKALPKLKLRFKIVSPIKLLRKLRDAYV 287
           HW R +YQRLD  +  + K +RLGGK++R W+I+ +PKL L  KI+SP+KLL KL++AYV
Sbjct: 15  HWRRGKYQRLDVANKRNVKMVRLGGKQRRFWRIRQIPKLHL--KIISPLKLLAKLKNAYV 72

Query: 288 NMMFRLAGNVGALNGDNFFGAKTAPKAKKISKA---EEFE 398
           +MM  L+G+VGALN  N FG K  PKA+++  A   EEF+
Sbjct: 73  SMMLNLSGSVGALNSGNVFGGKRVPKARQVPIAYSNEEFD 112


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