BLASTX nr result
ID: Cimicifuga21_contig00000444
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00000444
(1367 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002277422.1| PREDICTED: histone deacetylase HDT1-like [Vi... 137 5e-30
emb|CBI30242.3| unnamed protein product [Vitis vinifera] 137 5e-30
gb|ACZ54946.1| type 2 histone deacetylase b [Nicotiana tabacum] 133 9e-29
ref|XP_002328078.1| histone deacetylase [Populus trichocarpa] gi... 133 9e-29
gb|ABK93186.1| unknown [Populus trichocarpa] 133 9e-29
>ref|XP_002277422.1| PREDICTED: histone deacetylase HDT1-like [Vitis vinifera]
Length = 307
Score = 137 bits (346), Expect = 5e-30
Identities = 68/95 (71%), Positives = 79/95 (83%), Gaps = 2/95 (2%)
Frame = -1
Query: 1268 MEFWGVEVKAGEPLKVKQEEGTILHLSQASLGEVKK--GNDSVLLSVNIDGKKTVLGTLS 1095
MEFWGVEVKAGEPL+V + ++H+SQASLGE+KK GN+ V L NI G+K VLGTLS
Sbjct: 1 MEFWGVEVKAGEPLEVVPGDDMLVHISQASLGEIKKDKGNELVCLYANIGGQKLVLGTLS 60
Query: 1094 ADKFPQISYDLVFEKDFELSHTGKNGSVYFCGYRA 990
A+KFPQIS+DLVFEK FELSH KNGSVYFCGY+A
Sbjct: 61 AEKFPQISFDLVFEKKFELSHNWKNGSVYFCGYKA 95
Score = 128 bits (321), Expect = 4e-27
Identities = 64/102 (62%), Positives = 76/102 (74%), Gaps = 3/102 (2%)
Frame = -1
Query: 653 TPKNVKQSKKRPAESVTKTPAPEKKAKLVTPQKSGGDGKKGSTHTATPHPSK-AGK--SN 483
TPK SKKRP ESV+KTP P+KKAK VTPQK+G D KK H ATP+PSK AGK +N
Sbjct: 206 TPKKAGPSKKRPTESVSKTPVPDKKAKFVTPQKTGDDDKKSGGHVATPYPSKQAGKTPAN 265
Query: 482 ADKSKQQTPKSAGQVVCKTCSKTFNSDGALQSHTKAKHSDAK 357
+K KQQ KS G CK+C+++FNS+ ALQSHTKAKH+ AK
Sbjct: 266 TEKPKQQVQKSGGSFSCKSCNRSFNSENALQSHTKAKHTAAK 307
>emb|CBI30242.3| unnamed protein product [Vitis vinifera]
Length = 113
Score = 137 bits (346), Expect = 5e-30
Identities = 68/95 (71%), Positives = 79/95 (83%), Gaps = 2/95 (2%)
Frame = -1
Query: 1268 MEFWGVEVKAGEPLKVKQEEGTILHLSQASLGEVKK--GNDSVLLSVNIDGKKTVLGTLS 1095
MEFWGVEVKAGEPL+V + ++H+SQASLGE+KK GN+ V L NI G+K VLGTLS
Sbjct: 1 MEFWGVEVKAGEPLEVVPGDDMLVHISQASLGEIKKDKGNELVCLYANIGGQKLVLGTLS 60
Query: 1094 ADKFPQISYDLVFEKDFELSHTGKNGSVYFCGYRA 990
A+KFPQIS+DLVFEK FELSH KNGSVYFCGY+A
Sbjct: 61 AEKFPQISFDLVFEKKFELSHNWKNGSVYFCGYKA 95
>gb|ACZ54946.1| type 2 histone deacetylase b [Nicotiana tabacum]
Length = 294
Score = 133 bits (335), Expect = 9e-29
Identities = 72/127 (56%), Positives = 85/127 (66%), Gaps = 1/127 (0%)
Frame = -1
Query: 1268 MEFWGVEVKAGEPLKVKQEEGTILHLSQASLGEVKKGN-DSVLLSVNIDGKKTVLGTLSA 1092
MEFWG EVK+GEPL V+ +G +LHLSQASLGE+KK SV LSVNIDGKK VLGTL++
Sbjct: 1 MEFWGAEVKSGEPLTVQPGDGMVLHLSQASLGELKKDKVQSVCLSVNIDGKKLVLGTLNS 60
Query: 1091 DKFPQISYDLVFEKDFELSHTGKNGSVYFCGYRAXXXXXXXXXXXXXXXXXXXXETPVAP 912
DK PQ +DLVF++DFELSH KNGSVYF GY+A + P+
Sbjct: 61 DKVPQQQFDLVFDRDFELSHNWKNGSVYFFGYKA-TNPFEEEEDDEDDEEESDEDIPLTI 119
Query: 911 VENGKPE 891
NGKPE
Sbjct: 120 ANNGKPE 126
Score = 121 bits (303), Expect = 5e-25
Identities = 66/100 (66%), Positives = 78/100 (78%), Gaps = 1/100 (1%)
Frame = -1
Query: 653 TPKNVKQSKKRPAESVTKTPAPEKKAKLVTPQKSGGDGKKGSTHTATPHPSK-AGKSNAD 477
TPK + KKR A+S TKTPA +KKAK VTPQK+ DGKKGS H ATPHPSK AGKS A+
Sbjct: 199 TPKKAEPGKKRKADSATKTPA-DKKAKFVTPQKT--DGKKGSGHVATPHPSKQAGKSPAN 255
Query: 476 KSKQQTPKSAGQVVCKTCSKTFNSDGALQSHTKAKHSDAK 357
K+ QQTPKS G +CKTC++ F S+ AL+SH+KAKHS AK
Sbjct: 256 KN-QQTPKSGGAHLCKTCNRGFGSENALESHSKAKHSAAK 294
>ref|XP_002328078.1| histone deacetylase [Populus trichocarpa] gi|222837593|gb|EEE75958.1|
histone deacetylase [Populus trichocarpa]
Length = 260
Score = 133 bits (335), Expect = 9e-29
Identities = 65/95 (68%), Positives = 81/95 (85%), Gaps = 1/95 (1%)
Frame = -1
Query: 1271 AMEFWGVEVKAGEPLKVKQEEGTILHLSQASLGEV-KKGNDSVLLSVNIDGKKTVLGTLS 1095
+MEFWGVEVKAGEPLKV+ ++ ++HLSQA+LGE KKGN+SV L + +D KK VLGTLS
Sbjct: 3 SMEFWGVEVKAGEPLKVEPKDFYMIHLSQAALGESSKKGNESVPLFLKLDEKKLVLGTLS 62
Query: 1094 ADKFPQISYDLVFEKDFELSHTGKNGSVYFCGYRA 990
DK PQ+S+DLVFE++FELSH KNGSV+FCGY+A
Sbjct: 63 PDKIPQLSFDLVFEREFELSHNWKNGSVFFCGYQA 97
Score = 74.3 bits (181), Expect = 7e-11
Identities = 39/79 (49%), Positives = 51/79 (64%)
Frame = -1
Query: 653 TPKNVKQSKKRPAESVTKTPAPEKKAKLVTPQKSGGDGKKGSTHTATPHPSKAGKSNADK 474
TPK +QSKKR ++S KTP KKAK TPQK+ G GK G TPHP+K GK+ ++
Sbjct: 187 TPKKAEQSKKRTSDSAIKTPVSSKKAKTATPQKTDG-GKAGQ---VTPHPAK-GKAASNG 241
Query: 473 SKQQTPKSAGQVVCKTCSK 417
+ +TPKS G CK+C +
Sbjct: 242 NNPKTPKSGGNFSCKSCER 260
>gb|ABK93186.1| unknown [Populus trichocarpa]
Length = 279
Score = 133 bits (335), Expect = 9e-29
Identities = 65/95 (68%), Positives = 81/95 (85%), Gaps = 1/95 (1%)
Frame = -1
Query: 1271 AMEFWGVEVKAGEPLKVKQEEGTILHLSQASLGEV-KKGNDSVLLSVNIDGKKTVLGTLS 1095
+MEFWGVEVKAGEPLKV+ ++ ++HLSQA+LGE KKGN+SV L + +D KK VLGTLS
Sbjct: 3 SMEFWGVEVKAGEPLKVEPKDFYMIHLSQAALGESSKKGNESVPLFLKLDEKKLVLGTLS 62
Query: 1094 ADKFPQISYDLVFEKDFELSHTGKNGSVYFCGYRA 990
DK PQ+S+DLVFE++FELSH KNGSV+FCGY+A
Sbjct: 63 PDKIPQLSFDLVFEREFELSHNWKNGSVFFCGYQA 97
Score = 99.4 bits (246), Expect = 2e-18
Identities = 50/97 (51%), Positives = 67/97 (69%)
Frame = -1
Query: 653 TPKNVKQSKKRPAESVTKTPAPEKKAKLVTPQKSGGDGKKGSTHTATPHPSKAGKSNADK 474
TPK +QSKKR ++S KTP KKAK TPQK+ G GK G TPHP+K G++ ++
Sbjct: 187 TPKKAEQSKKRTSDSAIKTPVSSKKAKTATPQKTDG-GKAGQV---TPHPAK-GEAASNG 241
Query: 473 SKQQTPKSAGQVVCKTCSKTFNSDGALQSHTKAKHSD 363
+ +TPKS G CK+C ++F SDGAL+SH++AKH D
Sbjct: 242 NNPKTPKSGGNFSCKSCERSFGSDGALKSHSQAKHGD 278