BLASTX nr result

ID: Cimicifuga21_contig00000443 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00000443
         (755 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278652.1| PREDICTED: glutaredoxin-C6 [Vitis vinifera] ...   142   1e-31
ref|XP_002308552.1| glutaredoxin [Populus trichocarpa] gi|222854...   124   3e-26
gb|ABK93401.1| unknown [Populus trichocarpa]                          124   3e-26
ref|XP_003544540.1| PREDICTED: glutaredoxin-C6-like [Glycine max]     122   1e-25
ref|XP_004141321.1| PREDICTED: glutaredoxin-C6-like [Cucumis sat...   120   4e-25

>ref|XP_002278652.1| PREDICTED: glutaredoxin-C6 [Vitis vinifera]
           gi|147866668|emb|CAN83675.1| hypothetical protein
           VITISV_003840 [Vitis vinifera]
          Length = 137

 Score =  142 bits (357), Expect = 1e-31
 Identities = 81/133 (60%), Positives = 91/133 (68%), Gaps = 6/133 (4%)
 Frame = -3

Query: 684 RFQQLADGEVTLELNTPTEAKLPLTIDVAETVEEKIQRLISENPVIIFSRSSCYMCHVMK 505
           RF+ L +G V LEL TPT    PL IDV E+ E +IQRLISENPVIIFSR SC MCHVMK
Sbjct: 6   RFRTLTEGGVRLEL-TPTTTS-PLAIDVTESTEMRIQRLISENPVIIFSRPSCCMCHVMK 63

Query: 504 KLLSTLRVHPTXXXXXXXXXXXXVAAGHDS------APVVFIGGNRVGGLESLVALHVTG 343
           +LLST+ VHPT             A   DS      AP VFIGG RVGGLESLVALH++G
Sbjct: 64  RLLSTIGVHPTVIELDDEEIGALAAHSADSTSTAPVAPAVFIGGTRVGGLESLVALHLSG 123

Query: 342 NLVPKLGEAGALW 304
           +LVP+L E GALW
Sbjct: 124 HLVPRLVEVGALW 136


>ref|XP_002308552.1| glutaredoxin [Populus trichocarpa] gi|222854528|gb|EEE92075.1|
           glutaredoxin [Populus trichocarpa]
          Length = 130

 Score =  124 bits (310), Expect = 3e-26
 Identities = 71/124 (57%), Positives = 82/124 (66%), Gaps = 7/124 (5%)
 Frame = -3

Query: 657 VTLELNTPTEAKLPLTIDVAETVEEKIQRLISENPVIIFSRSSCYMCHVMKKLLSTLRVH 478
           V L+L TP  +   L+ID AE+ E +IQRLISE+PVIIFSRSSC MCHVMKKLL+T+ VH
Sbjct: 8   VRLDLTTPPNSS-SLSIDGAESTETRIQRLISEHPVIIFSRSSCCMCHVMKKLLATIGVH 66

Query: 477 PTXXXXXXXXXXXXVAAGHDS-------APVVFIGGNRVGGLESLVALHVTGNLVPKLGE 319
           PT              A  D        AP VFIGG  VGGLESLVALH++G+LVPKL E
Sbjct: 67  PTVIELDDHEISALPPAAEDGSPSPSSLAPAVFIGGTCVGGLESLVALHLSGHLVPKLVE 126

Query: 318 AGAL 307
            G L
Sbjct: 127 VGVL 130


>gb|ABK93401.1| unknown [Populus trichocarpa]
          Length = 151

 Score =  124 bits (310), Expect = 3e-26
 Identities = 71/124 (57%), Positives = 82/124 (66%), Gaps = 7/124 (5%)
 Frame = -3

Query: 657 VTLELNTPTEAKLPLTIDVAETVEEKIQRLISENPVIIFSRSSCYMCHVMKKLLSTLRVH 478
           V L+L TP  +   L+ID AE+ E +IQRLISE+PVIIFSRSSC MCHVMKKLL+T+ VH
Sbjct: 13  VRLDLTTPPNSS-SLSIDGAESTETRIQRLISEHPVIIFSRSSCCMCHVMKKLLATIGVH 71

Query: 477 PTXXXXXXXXXXXXVAAGHDS-------APVVFIGGNRVGGLESLVALHVTGNLVPKLGE 319
           PT              A  D        AP VFIGG  VGGLESLVALH++G+LVPKL E
Sbjct: 72  PTVIELDDHEISALPPAAEDGSPSPSSLAPAVFIGGTCVGGLESLVALHLSGHLVPKLVE 131

Query: 318 AGAL 307
            G L
Sbjct: 132 VGVL 135


>ref|XP_003544540.1| PREDICTED: glutaredoxin-C6-like [Glycine max]
          Length = 141

 Score =  122 bits (305), Expect = 1e-25
 Identities = 70/140 (50%), Positives = 91/140 (65%), Gaps = 11/140 (7%)
 Frame = -3

Query: 690 MWRFQQLADGEVTLELNTPTE--------AKLPLTIDVAETVEEKIQRLISENPVIIFSR 535
           M   ++ ++  V L+L+TPT         +   L+IDV E+ E +IQRLISE+PVIIF+R
Sbjct: 1   MQGLRRCSNDVVQLDLSTPTTTTTTTTTTSSCSLSIDVDESTEARIQRLISEHPVIIFTR 60

Query: 534 SSCYMCHVMKKLLSTLRVHPTXXXXXXXXXXXXVAAGH---DSAPVVFIGGNRVGGLESL 364
           SSC MCHVMKKLL+T+ V+PT                +   +  P VFIGG+ VGGLESL
Sbjct: 61  SSCCMCHVMKKLLATIGVNPTVIELDDHEIAALPFPDNNHRNPIPAVFIGGDSVGGLESL 120

Query: 363 VALHVTGNLVPKLGEAGALW 304
           VALHV+G+LVPKL + GALW
Sbjct: 121 VALHVSGHLVPKLVQVGALW 140


>ref|XP_004141321.1| PREDICTED: glutaredoxin-C6-like [Cucumis sativus]
           gi|449486670|ref|XP_004157363.1| PREDICTED:
           glutaredoxin-C6-like [Cucumis sativus]
          Length = 135

 Score =  120 bits (300), Expect = 4e-25
 Identities = 66/121 (54%), Positives = 85/121 (70%), Gaps = 5/121 (4%)
 Frame = -3

Query: 651 LELNTP---TEAKLPLTIDVAETVEEKIQRLISENPVIIFSRSSCYMCHVMKKLLSTLRV 481
           L+L+ P   T +   L+IDVAE+ + +I+RLISE+PVIIFSR+SC MCHVMKKLL+T+ V
Sbjct: 14  LDLSPPPSTTPSPASLSIDVAESADTRIRRLISEHPVIIFSRTSCCMCHVMKKLLATIGV 73

Query: 480 HPT--XXXXXXXXXXXXVAAGHDSAPVVFIGGNRVGGLESLVALHVTGNLVPKLGEAGAL 307
           HPT               ++   + P VFIGG  +GGLESLVALH++G+LVPKL E GAL
Sbjct: 74  HPTVIELEDDEIHALASFSSTTTATPAVFIGGAFLGGLESLVALHLSGHLVPKLVEVGAL 133

Query: 306 W 304
           W
Sbjct: 134 W 134


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