BLASTX nr result

ID: Cimicifuga21_contig00000415 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00000415
         (1951 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509516.1| B2 protein, putative [Ricinus communis] gi|2...   440   e-121
ref|XP_004145666.1| PREDICTED: B2 protein-like [Cucumis sativus]      435   e-119
ref|XP_004167610.1| PREDICTED: LOW QUALITY PROTEIN: B2 protein-l...   434   e-119
ref|XP_002269664.1| PREDICTED: B2 protein-like [Vitis vinifera]       434   e-119
ref|XP_002328947.1| predicted protein [Populus trichocarpa] gi|2...   431   e-118

>ref|XP_002509516.1| B2 protein, putative [Ricinus communis] gi|223549415|gb|EEF50903.1|
            B2 protein, putative [Ricinus communis]
          Length = 304

 Score =  440 bits (1132), Expect = e-121
 Identities = 228/306 (74%), Positives = 241/306 (78%), Gaps = 7/306 (2%)
 Frame = +3

Query: 204  MENQLSFWQLGDELRGQSKVSEDHKWFMAASKLAEQTRSKSERMNNIDLSKNLAETRPRE 383
            ME+  SFWQLGDELRGQSKVSEDHKW MAASKLAEQTR K ERMNN+DLSK LAE  PR+
Sbjct: 1    MESMHSFWQLGDELRGQSKVSEDHKWIMAASKLAEQTRVKGERMNNLDLSKGLAEIWPRD 60

Query: 384  KTVFQEDXXXXXXXXXXXXXDSKMNEPMGKSSFRNELYHNMNVVYQKNTSNNMGNFNVTV 563
            K  FQED             + KM E + K SFRN +Y NMN VYQKN  NN+ N     
Sbjct: 61   KLGFQEDNKFESLNFNMSNLEPKMTENVSKISFRNGIY-NMNAVYQKNNMNNIINLT--- 116

Query: 564  GNKFSNNNH--REPNKXXXXXXXXXXX-----AVDKRFKTLPSTETLPRNEVLGGYIFVC 722
            G+K+  NN   +EPN                 AVDKRFKTLP+TETLPRNEVLGGYIFVC
Sbjct: 117  GSKYMGNNQSIKEPNNNSNNSNNNVENNNANSAVDKRFKTLPATETLPRNEVLGGYIFVC 176

Query: 723  NNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEAVSFGGSNIDPT 902
            NNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEA SFGGSNIDPT
Sbjct: 177  NNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEASSFGGSNIDPT 236

Query: 903  AWEDKKCKGESRFPAQVRIRVRKLCKALEEDSFRPVLHHYDGPKFRLELSIPETLALLDL 1082
            AWEDKKCKGESRFPAQVRIRVRKLCKALEED+FRPVLHHYDGPKFRLELSIPETL LLDL
Sbjct: 237  AWEDKKCKGESRFPAQVRIRVRKLCKALEEDAFRPVLHHYDGPKFRLELSIPETLDLLDL 296

Query: 1083 CGEQGS 1100
            C + GS
Sbjct: 297  CEQAGS 302


>ref|XP_004145666.1| PREDICTED: B2 protein-like [Cucumis sativus]
          Length = 304

 Score =  435 bits (1119), Expect = e-119
 Identities = 221/306 (72%), Positives = 238/306 (77%), Gaps = 7/306 (2%)
 Frame = +3

Query: 204  MENQLSFWQLGDELRGQSKVSEDHKWFMAASKLAEQTRSKSERMNNIDLSKNLAETRPRE 383
            M+   SFWQLGDELRGQ+KVSEDHKW  AASKLAEQTRSK ERMNN+D SK+  + RPRE
Sbjct: 1    MDGSYSFWQLGDELRGQTKVSEDHKWLWAASKLAEQTRSKGERMNNLDFSKSTLDARPRE 60

Query: 384  KTVFQEDXXXXXXXXXXXXXDSKMNEPMGKSSFRNELYHNMNVVYQKNTSNNMGNFNVTV 563
            K  FQED             DSKM +P+ KSS RN +Y NMN VY KN +N  GN     
Sbjct: 61   KFGFQEDNKFESFNFNMLSLDSKMTDPVNKSSLRNGIY-NMNAVYVKNNTNVAGNLP--- 116

Query: 564  GNKFSNNNHREPN-------KXXXXXXXXXXXAVDKRFKTLPSTETLPRNEVLGGYIFVC 722
            G KFS N++   +                   A+DKRFKTLP+TETLPRNEVLGGYIFVC
Sbjct: 117  GAKFSGNDYINKDLTNYSSTNNNVGENANSINAIDKRFKTLPATETLPRNEVLGGYIFVC 176

Query: 723  NNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEAVSFGGSNIDPT 902
            NNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEA SFGGSNIDPT
Sbjct: 177  NNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEAASFGGSNIDPT 236

Query: 903  AWEDKKCKGESRFPAQVRIRVRKLCKALEEDSFRPVLHHYDGPKFRLELSIPETLALLDL 1082
            AWEDKKCKGESRFPAQVRIR+RKLC+ALEEDSFRPVLHHYDGPKFRLELSIPETL LLDL
Sbjct: 237  AWEDKKCKGESRFPAQVRIRIRKLCRALEEDSFRPVLHHYDGPKFRLELSIPETLDLLDL 296

Query: 1083 CGEQGS 1100
            C + GS
Sbjct: 297  CEQAGS 302


>ref|XP_004167610.1| PREDICTED: LOW QUALITY PROTEIN: B2 protein-like [Cucumis sativus]
          Length = 304

 Score =  434 bits (1116), Expect = e-119
 Identities = 220/306 (71%), Positives = 238/306 (77%), Gaps = 7/306 (2%)
 Frame = +3

Query: 204  MENQLSFWQLGDELRGQSKVSEDHKWFMAASKLAEQTRSKSERMNNIDLSKNLAETRPRE 383
            M+   SFWQLGDELRGQ+KVSEDHKW  AASKLAEQTRSK ERMNN+D SK+  + RPRE
Sbjct: 1    MDGSYSFWQLGDELRGQTKVSEDHKWLWAASKLAEQTRSKGERMNNLDFSKSTLDARPRE 60

Query: 384  KTVFQEDXXXXXXXXXXXXXDSKMNEPMGKSSFRNELYHNMNVVYQKNTSNNMGNFNVTV 563
            K  FQED             DSKM +P+ KSS RN +Y NMN VY +N +N  GN     
Sbjct: 61   KFGFQEDNKFESFNFNMLSLDSKMTDPVNKSSLRNGIY-NMNAVYXENNTNVAGNLP--- 116

Query: 564  GNKFSNNNHREPN-------KXXXXXXXXXXXAVDKRFKTLPSTETLPRNEVLGGYIFVC 722
            G KFS N++   +                   A+DKRFKTLP+TETLPRNEVLGGYIFVC
Sbjct: 117  GAKFSGNDYINKDLTNYSSTNNNVGENANSINAIDKRFKTLPATETLPRNEVLGGYIFVC 176

Query: 723  NNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEAVSFGGSNIDPT 902
            NNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEA SFGGSNIDPT
Sbjct: 177  NNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEAASFGGSNIDPT 236

Query: 903  AWEDKKCKGESRFPAQVRIRVRKLCKALEEDSFRPVLHHYDGPKFRLELSIPETLALLDL 1082
            AWEDKKCKGESRFPAQVRIR+RKLC+ALEEDSFRPVLHHYDGPKFRLELSIPETL LLDL
Sbjct: 237  AWEDKKCKGESRFPAQVRIRIRKLCRALEEDSFRPVLHHYDGPKFRLELSIPETLDLLDL 296

Query: 1083 CGEQGS 1100
            C + GS
Sbjct: 297  CEQAGS 302


>ref|XP_002269664.1| PREDICTED: B2 protein-like [Vitis vinifera]
          Length = 302

 Score =  434 bits (1115), Expect = e-119
 Identities = 218/301 (72%), Positives = 235/301 (78%), Gaps = 3/301 (0%)
 Frame = +3

Query: 204  MENQLSFWQLGDELRGQSKVSEDHKWFMAASKLAEQTRSKSERMNNIDLSKNLAETRPRE 383
            ME+  SFWQLGDELRGQSKVSEDHKW M ASKLAEQTRSK ER NN+DLSK  +E RPR+
Sbjct: 1    MESMNSFWQLGDELRGQSKVSEDHKWLMVASKLAEQTRSKGERFNNLDLSKGPSEIRPRD 60

Query: 384  KTVFQEDXXXXXXXXXXXXXDSKMNEPMGKSSFRNELYHNMNVVYQKNTSNNMGNFNVTV 563
            + VFQED             + K+ + M KS+FRN LY NMN  Y K+ +N MGN NV  
Sbjct: 61   RNVFQEDNKFENLNFNMLNLEPKVTDNMNKSNFRNGLY-NMNAAYPKSNANVMGNVNVNK 119

Query: 564  GNKFSNNNH---REPNKXXXXXXXXXXXAVDKRFKTLPSTETLPRNEVLGGYIFVCNNDT 734
             N   NN        N            A+DKRFKTLP++ETLPRNEVLGGYIFVCNNDT
Sbjct: 120  HNGNHNNKELSSNSNNSNTNNENTGGNSAMDKRFKTLPASETLPRNEVLGGYIFVCNNDT 179

Query: 735  MQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEAVSFGGSNIDPTAWED 914
            MQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEA SFGGSNIDPTAWED
Sbjct: 180  MQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEAASFGGSNIDPTAWED 239

Query: 915  KKCKGESRFPAQVRIRVRKLCKALEEDSFRPVLHHYDGPKFRLELSIPETLALLDLCGEQ 1094
            KKCKGESRFPAQVRIRVR LCKALEED+FRPVLHHYDGPKFRLELS+PETL LLDLC + 
Sbjct: 240  KKCKGESRFPAQVRIRVRNLCKALEEDAFRPVLHHYDGPKFRLELSVPETLDLLDLCEQA 299

Query: 1095 G 1097
            G
Sbjct: 300  G 300


>ref|XP_002328947.1| predicted protein [Populus trichocarpa] gi|222839377|gb|EEE77714.1|
            predicted protein [Populus trichocarpa]
          Length = 300

 Score =  431 bits (1108), Expect = e-118
 Identities = 222/303 (73%), Positives = 238/303 (78%), Gaps = 3/303 (0%)
 Frame = +3

Query: 204  MENQLSFWQLGDELRGQSKVSEDHKWFMAASKLAEQTRSKSERMNNIDLSKNLAETRPRE 383
            ME+  SFWQLGDELRGQSKVSEDHKW MAA KLAEQTR K ERMNN+DLSK L E R R+
Sbjct: 1    MESLHSFWQLGDELRGQSKVSEDHKWLMAALKLAEQTRGKGERMNNLDLSKGLPEMRSRD 60

Query: 384  KTVFQEDXXXXXXXXXXXXXDSKMNEPMGKSSFRNELYHNMNVVYQKNTSNNMGNFNVTV 563
            K  FQE+             +SKM E   KSS  N  Y NMN VYQKN  N++GN     
Sbjct: 61   KIGFQEENKFESFNFNMMNLESKMTENGNKSSLMNNAY-NMNAVYQKNNINSVGNMT--- 116

Query: 564  GNKFSNNN--HREP-NKXXXXXXXXXXXAVDKRFKTLPSTETLPRNEVLGGYIFVCNNDT 734
            G+K+S NN   ++P N             VDKRFKTLP+TETLPRNEVLGGYIFVCNNDT
Sbjct: 117  GSKYSGNNLSSKDPSNHSNNNINNDNNNTVDKRFKTLPATETLPRNEVLGGYIFVCNNDT 176

Query: 735  MQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEAVSFGGSNIDPTAWED 914
            MQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEA SFGGSNIDPTAWED
Sbjct: 177  MQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEAASFGGSNIDPTAWED 236

Query: 915  KKCKGESRFPAQVRIRVRKLCKALEEDSFRPVLHHYDGPKFRLELSIPETLALLDLCGEQ 1094
            KKCKGESRFPAQVRIR+RKL KALEED+FRPVLHHYDGPKFRLELS+PETL LLDLC + 
Sbjct: 237  KKCKGESRFPAQVRIRIRKLYKALEEDAFRPVLHHYDGPKFRLELSVPETLDLLDLCEQA 296

Query: 1095 GSL 1103
            GSL
Sbjct: 297  GSL 299


Top