BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00000414
         (829 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37645.3| unnamed protein product [Vitis vinifera]              147   3e-33
ref|XP_002280084.2| PREDICTED: high mobility group B2 protein-li...   141   2e-31
ref|XP_003631923.1| PREDICTED: high mobility group B2 protein-li...   139   6e-31
ref|XP_002272299.1| PREDICTED: high mobility group-like isoform ...   138   1e-30
emb|CAA05365.1| high mobility group protein [Solanum tuberosum]       135   9e-30

>emb|CBI37645.3| unnamed protein product [Vitis vinifera]
          Length = 154

 Score =  147 bits (371), Expect = 3e-33
 Identities = 79/118 (66%), Positives = 85/118 (72%), Gaps = 3/118 (2%)
 Frame = -1

Query: 661 MKNPKSKAGTAKKADSKLSVXXXXXXXXXXXXXXXXXXXXXXK---RPASAFFVFMEEFR 491
           MK  KSKA   K+ADSKLSV                          RPASAFFVFMEEFR
Sbjct: 1   MKGGKSKAAEVKRADSKLSVKKKGAAAVGKKTAKKEKAVKDPNKPKRPASAFFVFMEEFR 60

Query: 490 KTYKEKHPNNKSVSVVGKAGGDKWKSLSDAEKAPYVAKAEKRKTEYNKNLQAYNKKLA 317
           K YKEKHP NKSVSVVGKAGGDKWKSLS+AEKAPYVAKAEKRKTEYNK++QAYNK++A
Sbjct: 61  KQYKEKHPANKSVSVVGKAGGDKWKSLSEAEKAPYVAKAEKRKTEYNKSMQAYNKRMA 118


>ref|XP_002280084.2| PREDICTED: high mobility group B2 protein-like isoform 1 [Vitis
           vinifera]
          Length = 156

 Score =  141 bits (355), Expect = 2e-31
 Identities = 78/120 (65%), Positives = 85/120 (70%), Gaps = 5/120 (4%)
 Frame = -1

Query: 661 MKNPKSKAGTAKKADS--KLSVXXXXXXXXXXXXXXXXXXXXXXK---RPASAFFVFMEE 497
           MK  KSKA   K+ADS  +LSV                          RPASAFFVFMEE
Sbjct: 1   MKGGKSKAAEVKRADSNARLSVKKKGAAAVGKKTAKKEKAVKDPNKPKRPASAFFVFMEE 60

Query: 496 FRKTYKEKHPNNKSVSVVGKAGGDKWKSLSDAEKAPYVAKAEKRKTEYNKNLQAYNKKLA 317
           FRK YKEKHP NKSVSVVGKAGGDKWKSLS+AEKAPYVAKAEKRKTEYNK++QAYNK++A
Sbjct: 61  FRKQYKEKHPANKSVSVVGKAGGDKWKSLSEAEKAPYVAKAEKRKTEYNKSMQAYNKRMA 120


>ref|XP_003631923.1| PREDICTED: high mobility group B2 protein-like isoform 2 [Vitis
           vinifera]
          Length = 125

 Score =  139 bits (351), Expect = 6e-31
 Identities = 77/119 (64%), Positives = 84/119 (70%), Gaps = 5/119 (4%)
 Frame = -1

Query: 661 MKNPKSKAGTAKKADS--KLSVXXXXXXXXXXXXXXXXXXXXXXK---RPASAFFVFMEE 497
           MK  KSKA   K+ADS  +LSV                          RPASAFFVFMEE
Sbjct: 1   MKGGKSKAAEVKRADSNARLSVKKKGAAAVGKKTAKKEKAVKDPNKPKRPASAFFVFMEE 60

Query: 496 FRKTYKEKHPNNKSVSVVGKAGGDKWKSLSDAEKAPYVAKAEKRKTEYNKNLQAYNKKL 320
           FRK YKEKHP NKSVSVVGKAGGDKWKSLS+AEKAPYVAKAEKRKTEYNK++QAYNK++
Sbjct: 61  FRKQYKEKHPANKSVSVVGKAGGDKWKSLSEAEKAPYVAKAEKRKTEYNKSMQAYNKRM 119


>ref|XP_002272299.1| PREDICTED: high mobility group-like isoform 1 [Vitis vinifera]
           gi|359491843|ref|XP_003634333.1| PREDICTED: high
           mobility group-like isoform 2 [Vitis vinifera]
           gi|297745562|emb|CBI40727.3| unnamed protein product
           [Vitis vinifera]
          Length = 153

 Score =  138 bits (348), Expect = 1e-30
 Identities = 76/118 (64%), Positives = 84/118 (71%), Gaps = 3/118 (2%)
 Frame = -1

Query: 661 MKNPKSKAGTAKKADSKLSVXXXXXXXXXXXXXXXXXXXXXXK---RPASAFFVFMEEFR 491
           MK  +SK+ T KKAD+KLSV                          RPASAFFVFMEEFR
Sbjct: 1   MKGGRSKSDT-KKADAKLSVKKGAAATKAGKKTKKEKPVKDPNKPKRPASAFFVFMEEFR 59

Query: 490 KTYKEKHPNNKSVSVVGKAGGDKWKSLSDAEKAPYVAKAEKRKTEYNKNLQAYNKKLA 317
           K YKEKHP+NKSVSVVGKAGGDKWKS+S+AEKAPYVAKAEKRK EY KN++AYNKK A
Sbjct: 60  KQYKEKHPSNKSVSVVGKAGGDKWKSMSEAEKAPYVAKAEKRKVEYEKNMKAYNKKQA 117


>emb|CAA05365.1| high mobility group protein [Solanum tuberosum]
          Length = 141

 Score =  135 bits (341), Expect = 9e-30
 Identities = 75/115 (65%), Positives = 78/115 (67%)
 Frame = -1

Query: 661 MKNPKSKAGTAKKADSKLSVXXXXXXXXXXXXXXXXXXXXXXKRPASAFFVFMEEFRKTY 482
           MK  KSKA    KAD+KL V                       RP SAFFVFMEEFRKTY
Sbjct: 1   MKGAKSKA----KADTKLGVRKKATESKKAKNAAKDPNKPK--RPPSAFFVFMEEFRKTY 54

Query: 481 KEKHPNNKSVSVVGKAGGDKWKSLSDAEKAPYVAKAEKRKTEYNKNLQAYNKKLA 317
           KEKHPNNKSV+VVGKAGGDKWK LSD EKAPY AKAEKRK EY KN+ AYNKKLA
Sbjct: 55  KEKHPNNKSVAVVGKAGGDKWKQLSDEEKAPYQAKAEKRKAEYQKNMDAYNKKLA 109