BLASTX nr result

ID: Cimicifuga21_contig00000408 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00000408
         (1474 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297863.1| predicted protein [Populus trichocarpa] gi|1...    68   5e-09
ref|XP_002512640.1| conserved hypothetical protein [Ricinus comm...    64   1e-07
ref|XP_002279849.1| PREDICTED: uncharacterized protein LOC100265...    63   2e-07
ref|XP_002304657.1| predicted protein [Populus trichocarpa] gi|2...    63   2e-07
gb|ACU23606.1| unknown [Glycine max]                                   62   4e-07

>ref|XP_002297863.1| predicted protein [Populus trichocarpa] gi|118485800|gb|ABK94748.1|
            unknown [Populus trichocarpa] gi|222845121|gb|EEE82668.1|
            predicted protein [Populus trichocarpa]
          Length = 186

 Score = 68.2 bits (165), Expect = 5e-09
 Identities = 45/108 (41%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
 Frame = +1

Query: 1108 LRTGKPRCINWKSEVT*RRSSKELQFLWEIXXXXXXXXXCWCDGENSLSDTTPSSTT--Y 1281
            L+TG+   INW++ +  R   +  Q   E             D E S S+++PSS+   Y
Sbjct: 80   LKTGEVYYINWRNGMKAREDPRITQ---EYNGDFYSEDDSSYDSEESSSESSPSSSREHY 136

Query: 1282 SNSFAKA-HVLV-EGCKNCLMYFMLPKRVEQCPKCNNASLLRFDPQPN 1419
             N   K  HVLV  GCK+C MYFM+PK+VE CPKC N  LL FD   N
Sbjct: 137  HNRLQKEDHVLVVAGCKSCFMYFMVPKQVEVCPKC-NGQLLHFDRSEN 183


>ref|XP_002512640.1| conserved hypothetical protein [Ricinus communis]
            gi|223548601|gb|EEF50092.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 199

 Score = 63.9 bits (154), Expect = 1e-07
 Identities = 41/105 (39%), Positives = 56/105 (53%), Gaps = 5/105 (4%)
 Frame = +1

Query: 1108 LRTGKPRCINWKSEVT*RRSSKELQFLWEIXXXXXXXXXCWCDGENSLSDTTPSST---- 1275
            L+TG+   INW++ +  +   +  Q   E             D E S S+++P S+    
Sbjct: 92   LKTGEIYYINWRNGMKAKEDPRVTQ---EYSGDYYSEDESSYDSEESSSESSPPSSREHY 148

Query: 1276 TYSNSFAKAHVLV-EGCKNCLMYFMLPKRVEQCPKCNNASLLRFD 1407
            T      + HVLV  GCK+CLMYFM+PK+VE CPKC N  LL FD
Sbjct: 149  TSRGEQKEDHVLVVAGCKSCLMYFMVPKQVEDCPKC-NGQLLHFD 192


>ref|XP_002279849.1| PREDICTED: uncharacterized protein LOC100265236 [Vitis vinifera]
          Length = 805

 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 101/386 (26%), Positives = 160/386 (41%), Gaps = 28/386 (7%)
 Frame = +2

Query: 2    KRGHQPTGRLARTAKSSGFRSVQDMLTANGPENISVLWENVMSSDSKK-IKEHKRKALDD 178
            K G  PTG L  TAK++GF SV +ML A  P+      ++++ S SK+ +    RK   +
Sbjct: 133  KIGCNPTGMLVYTAKATGFSSVSEMLQAIDPDGSCKNVKDIVCSPSKESLIVSPRKRGKE 192

Query: 179  NVFGGRKDD-----------DTQSKKRTKKAHLSGINLSIAGNEDEKITERVEVGEKMPK 325
            N F G+KD            D    K+ K+  L   +    GN+D   + +     K   
Sbjct: 193  NSFDGKKDSNLHPLKLMLSPDETKPKKIKREQLKEHD----GNKDGGASLK-----KSSS 243

Query: 326  IRLSKLKILARAKK---IEEHECIS--LEKINTGKNMFEGSKDDGPKAQLISEINVNVLE 490
             R SK ++ A  K+   ++E  C +   +K++   N+     + G K   +  +   +++
Sbjct: 244  RRPSKNEVKADGKEDDVLQEKGCGASVSQKVSLDSNVIGKKGEQGAKPNKVGVLGNAIID 303

Query: 491  NEDDTISERVDGGKKMPKERQNNLKKLARAKRCINVGENGAQSENNAEEPHISMKPSTEN 670
            N       +V    K+ K R     KL R +  ++V       ++N           T +
Sbjct: 304  NV-GAKPNKVVRSHKVKKHRM----KLRRKEFDVDV---PVSHDSNVTGEKGEEGDCTTS 355

Query: 671  EEEGTNEMADVDQ--KKPKKPRNRKETTLDPTKTQERIADSTQASQICCSEEICTELIWK 844
            +  G  + A +D    KP +     +      K Q++  D    S  C S  I      K
Sbjct: 356  QNMGVLDSAIIDNVGAKPNEVVRSHKVKKHRMKFQKKEFD-VDVSMSCDSNVIGD----K 410

Query: 845  EEETDEK---HRTLLD---CDKNGGKENLEDKRMPIDMCKLETEPDGDISLPQDIDLTTV 1006
             E+ D K   +  +LD    D  G K N  +K     M     E D D+ LPQ I LTT+
Sbjct: 411  GEDGDCKTCQNVGVLDNAIIDNAGAKPN--NKVRKHSMKFQLKEFDVDVPLPQGISLTTI 468

Query: 1007 SDIELLAEDV---LQIIEIFNPSGEI 1075
            + IEL  EDV   LQ +E     G++
Sbjct: 469  AGIELSPEDVGHALQFLEFCAAFGKV 494


>ref|XP_002304657.1| predicted protein [Populus trichocarpa] gi|222842089|gb|EEE79636.1|
            predicted protein [Populus trichocarpa]
          Length = 177

 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 41/108 (37%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
 Frame = +1

Query: 1108 LRTGKPRCINWKSEVT*RRSSKELQFLWEIXXXXXXXXXCWCDGENSLSDTTPSSTT--Y 1281
            L+TG+   INW++ +  R   +  Q   +             D E S S+++P S+   +
Sbjct: 71   LKTGEIYYINWRNGMKAREDPRITQ---DYNGDFYSEDDSSYDSEESSSESSPPSSREHF 127

Query: 1282 SNSFAKA-HVLV-EGCKNCLMYFMLPKRVEQCPKCNNASLLRFDPQPN 1419
            +N   K  HVLV  GCK+C MYFM+PK+VE CPKC +  LL FD   N
Sbjct: 128  NNRLEKEDHVLVVAGCKSCFMYFMVPKQVEDCPKC-DGQLLHFDRSEN 174


>gb|ACU23606.1| unknown [Glycine max]
          Length = 197

 Score = 62.0 bits (149), Expect = 4e-07
 Identities = 37/114 (32%), Positives = 55/114 (48%), Gaps = 10/114 (8%)
 Frame = +1

Query: 1108 LRTGKPRCINWKSEVT*RRSSKELQFLWEIXXXXXXXXX----CWCDGENSLSDTTPSST 1275
            L+TG+   INW++ +  +   +  +  + +              W D E S S++ PSS+
Sbjct: 82   LKTGEIYYINWRNGMKAKEDPRSRRADYSVSRDCESEEEEEEESWYDSEESSSESCPSSS 141

Query: 1276 TYSNSFAKAH------VLVEGCKNCLMYFMLPKRVEQCPKCNNASLLRFDPQPN 1419
                   +        ++V GCK CLMYFM+PK+VE CPKC    LL FD   N
Sbjct: 142  KEHYDEGQVEKQNNNVLVVAGCKGCLMYFMVPKQVEDCPKC-TGQLLHFDRSEN 194


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