BLASTX nr result

ID: Cimicifuga21_contig00000398 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00000398
         (917 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284580.1| PREDICTED: uncharacterized protein LOC100245...   192   9e-47
ref|XP_002529307.1| conserved hypothetical protein [Ricinus comm...   187   4e-45
ref|XP_002306835.1| predicted protein [Populus trichocarpa] gi|2...   187   4e-45
gb|ABK94628.1| unknown [Populus trichocarpa]                          186   9e-45
emb|CBI23587.3| unnamed protein product [Vitis vinifera]              185   1e-44

>ref|XP_002284580.1| PREDICTED: uncharacterized protein LOC100245894 [Vitis vinifera]
          Length = 230

 Score =  192 bits (488), Expect = 9e-47
 Identities = 100/172 (58%), Positives = 126/172 (73%)
 Frame = -3

Query: 870 RRREKKNKLAS*ASNLLSVCSFVRTTMGFTSFAGRVLFASVFIISAWQQFNEFGVDGGPA 691
           R R ++ +  S A + LS    VRT+M F SF GRVLFASVFI+SAWQ+FNEFGVDGGPA
Sbjct: 51  RERGRRQRRDSKAFHQLSC---VRTSMAFVSFVGRVLFASVFILSAWQEFNEFGVDGGPA 107

Query: 690 AKALKPKFHVVTNHVSSKFGVEVPEIEIKHLVAAAIAFKGIGGVLFIFGSSLGAYLLLLH 511
            ++L PK  V + HVS+  GV+VPE+EIK+LVAA+IA KG+GG+LFIFGSSLGA+LLLLH
Sbjct: 108 VESLAPKLDVFSKHVSANVGVQVPEVEIKNLVAASIALKGLGGLLFIFGSSLGAHLLLLH 167

Query: 510 QVAASPILYDLYNNGIDKNDYVEHVLKYSQSXXXXXXXXXXXGMKNSIPKRQ 355
           Q    PILYD YN  +DK ++V   LK++Q+           GMKNS+P+RQ
Sbjct: 168 QAIVIPILYDFYNYDVDKKEFVVLFLKFTQNLALFGALLFFIGMKNSMPRRQ 219


>ref|XP_002529307.1| conserved hypothetical protein [Ricinus communis]
           gi|223531231|gb|EEF33076.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 157

 Score =  187 bits (474), Expect = 4e-45
 Identities = 92/146 (63%), Positives = 110/146 (75%)
 Frame = -3

Query: 792 MGFTSFAGRVLFASVFIISAWQQFNEFGVDGGPAAKALKPKFHVVTNHVSSKFGVEVPEI 613
           M F SF GRVLFASVFI+SAWQ+FN+FGVDGGPAAK+  PKF+V + HVSS  G +VP +
Sbjct: 1   MAFASFVGRVLFASVFILSAWQEFNDFGVDGGPAAKSFAPKFNVFSRHVSSNTGFQVPPV 60

Query: 612 EIKHLVAAAIAFKGIGGVLFIFGSSLGAYLLLLHQVAASPILYDLYNNGIDKNDYVEHVL 433
           EIKHLVAAAIA KG+GG+LFIFGSS GAYLLLLHQ   +PILYD YN   DK ++ +   
Sbjct: 61  EIKHLVAAAIAVKGLGGLLFIFGSSFGAYLLLLHQAVVTPILYDFYNYDADKKEFHQLFT 120

Query: 432 KYSQSXXXXXXXXXXXGMKNSIPKRQ 355
           K++Q+           GMKNSIP+RQ
Sbjct: 121 KFTQNLALFGALLFFIGMKNSIPRRQ 146


>ref|XP_002306835.1| predicted protein [Populus trichocarpa] gi|222856284|gb|EEE93831.1|
           predicted protein [Populus trichocarpa]
          Length = 157

 Score =  187 bits (474), Expect = 4e-45
 Identities = 93/146 (63%), Positives = 114/146 (78%)
 Frame = -3

Query: 792 MGFTSFAGRVLFASVFIISAWQQFNEFGVDGGPAAKALKPKFHVVTNHVSSKFGVEVPEI 613
           M FTSF GRVLFASVFI+SA+Q+FNEFGVDGGPAAKALKPKF V T+HV S  G++VPEI
Sbjct: 1   MAFTSFLGRVLFASVFILSAYQEFNEFGVDGGPAAKALKPKFGVFTSHVQSHAGIQVPEI 60

Query: 612 EIKHLVAAAIAFKGIGGVLFIFGSSLGAYLLLLHQVAASPILYDLYNNGIDKNDYVEHVL 433
           EIKHLV+AAI  KGIGG+LFI GSSLGAYLL++HQ+ A PILYD YN   ++ ++ +  +
Sbjct: 61  EIKHLVSAAIFLKGIGGILFIIGSSLGAYLLIIHQLIAIPILYDFYNYDSEEKEFNQLFI 120

Query: 432 KYSQSXXXXXXXXXXXGMKNSIPKRQ 355
           K++Q+           GMKNS P+RQ
Sbjct: 121 KFTQNMALYGALLFFIGMKNSFPRRQ 146


>gb|ABK94628.1| unknown [Populus trichocarpa]
          Length = 157

 Score =  186 bits (471), Expect = 9e-45
 Identities = 92/146 (63%), Positives = 114/146 (78%)
 Frame = -3

Query: 792 MGFTSFAGRVLFASVFIISAWQQFNEFGVDGGPAAKALKPKFHVVTNHVSSKFGVEVPEI 613
           M FTSF GRVLFASV+I+SA+Q+FNEFGVDGGPAAKALKPKF V T+HV S  G++VPEI
Sbjct: 1   MAFTSFLGRVLFASVYILSAYQEFNEFGVDGGPAAKALKPKFGVFTSHVQSHAGIQVPEI 60

Query: 612 EIKHLVAAAIAFKGIGGVLFIFGSSLGAYLLLLHQVAASPILYDLYNNGIDKNDYVEHVL 433
           EIKHLV+AAI  KGIGG+LFI GSSLGAYLL++HQ+ A PILYD YN   ++ ++ +  +
Sbjct: 61  EIKHLVSAAIFLKGIGGILFIIGSSLGAYLLIIHQLIAIPILYDFYNYDSEEKEFNQLFI 120

Query: 432 KYSQSXXXXXXXXXXXGMKNSIPKRQ 355
           K++Q+           GMKNS P+RQ
Sbjct: 121 KFTQNMALYGALLFFIGMKNSFPRRQ 146


>emb|CBI23587.3| unnamed protein product [Vitis vinifera]
          Length = 157

 Score =  185 bits (469), Expect = 1e-44
 Identities = 91/146 (62%), Positives = 112/146 (76%)
 Frame = -3

Query: 792 MGFTSFAGRVLFASVFIISAWQQFNEFGVDGGPAAKALKPKFHVVTNHVSSKFGVEVPEI 613
           M F SF GRVLFASVFI+SAWQ+FNEFGVDGGPA ++L PK  V + HVS+  GV+VPE+
Sbjct: 1   MAFVSFVGRVLFASVFILSAWQEFNEFGVDGGPAVESLAPKLDVFSKHVSANVGVQVPEV 60

Query: 612 EIKHLVAAAIAFKGIGGVLFIFGSSLGAYLLLLHQVAASPILYDLYNNGIDKNDYVEHVL 433
           EIK+LVAA+IA KG+GG+LFIFGSSLGA+LLLLHQ    PILYD YN  +DK ++V   L
Sbjct: 61  EIKNLVAASIALKGLGGLLFIFGSSLGAHLLLLHQAIVIPILYDFYNYDVDKKEFVVLFL 120

Query: 432 KYSQSXXXXXXXXXXXGMKNSIPKRQ 355
           K++Q+           GMKNS+P+RQ
Sbjct: 121 KFTQNLALFGALLFFIGMKNSMPRRQ 146


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