BLASTX nr result

ID: Cimicifuga21_contig00000397 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00000397
         (907 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285175.1| PREDICTED: actin-depolymerizing factor [Viti...   248   2e-63
ref|XP_002300779.1| predicted protein [Populus trichocarpa] gi|1...   242   1e-61
gb|ADB85088.1| actin-depolymerizing factor 6 [Jatropha curcas]        241   2e-61
gb|AAD23407.1| actin depolymerizing factor [Populus tremula x Po...   240   3e-61
ref|XP_002524620.1| actin depolymerizing factor, putative [Ricin...   239   6e-61

>ref|XP_002285175.1| PREDICTED: actin-depolymerizing factor [Vitis vinifera]
           gi|296083652|emb|CBI23641.3| unnamed protein product
           [Vitis vinifera]
          Length = 143

 Score =  248 bits (632), Expect = 2e-63
 Identities = 121/143 (84%), Positives = 127/143 (88%)
 Frame = +2

Query: 155 MSFRMSNASSGMGVADHSTGTFMELQRKKVHRYVIFKIDXXXXXXXXXXTGGPAESYDDF 334
           MSFR SNASSGMGVADH   T++ELQRKKVHRYVIFKID          TGGPAESYDDF
Sbjct: 1   MSFRGSNASSGMGVADHCKATYLELQRKKVHRYVIFKIDEKKKEVVVEKTGGPAESYDDF 60

Query: 335 TASLPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPATSRIRAKMLYATSKDRFRRVLDG 514
           TASLPENDCRYA+YDFD+VTSENCQKSKIFFIAWSP+ SRIRAKMLYATSKDRFRR L+G
Sbjct: 61  TASLPENDCRYAIYDFDFVTSENCQKSKIFFIAWSPSVSRIRAKMLYATSKDRFRRELEG 120

Query: 515 IHYEIQATDPTEMDLEVLRERAN 583
           IHYEIQATDPTEMDLEVLRERAN
Sbjct: 121 IHYEIQATDPTEMDLEVLRERAN 143


>ref|XP_002300779.1| predicted protein [Populus trichocarpa] gi|118482922|gb|ABK93374.1|
           unknown [Populus trichocarpa]
           gi|118484750|gb|ABK94244.1| unknown [Populus
           trichocarpa] gi|222842505|gb|EEE80052.1| predicted
           protein [Populus trichocarpa]
          Length = 146

 Score =  242 bits (617), Expect = 1e-61
 Identities = 122/146 (83%), Positives = 128/146 (87%), Gaps = 3/146 (2%)
 Frame = +2

Query: 155 MSFRMS---NASSGMGVADHSTGTFMELQRKKVHRYVIFKIDXXXXXXXXXXTGGPAESY 325
           MSFR +   NASSGMGVADHS   F+ELQRKKVHRYVIFKID          TGGPAESY
Sbjct: 1   MSFRGASRPNASSGMGVADHSKIAFVELQRKKVHRYVIFKIDEKKKEVVVEKTGGPAESY 60

Query: 326 DDFTASLPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPATSRIRAKMLYATSKDRFRRV 505
           +DFTASLPENDCRYAVYDFD+VTSENCQKSKIFFIAWSP+TSRIRAKMLYATSKDRFRR 
Sbjct: 61  EDFTASLPENDCRYAVYDFDFVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRE 120

Query: 506 LDGIHYEIQATDPTEMDLEVLRERAN 583
           LDGIHYEIQATDPTEMDLEV+RERAN
Sbjct: 121 LDGIHYEIQATDPTEMDLEVIRERAN 146


>gb|ADB85088.1| actin-depolymerizing factor 6 [Jatropha curcas]
          Length = 146

 Score =  241 bits (615), Expect = 2e-61
 Identities = 119/146 (81%), Positives = 127/146 (86%), Gaps = 3/146 (2%)
 Frame = +2

Query: 155 MSFR---MSNASSGMGVADHSTGTFMELQRKKVHRYVIFKIDXXXXXXXXXXTGGPAESY 325
           MSFR     NA+SGMGVADHS  TF+ELQRKKVHRYV+F+ID          TGGPAESY
Sbjct: 1   MSFRGLSRPNATSGMGVADHSINTFLELQRKKVHRYVVFRIDEKKKEVVVEKTGGPAESY 60

Query: 326 DDFTASLPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPATSRIRAKMLYATSKDRFRRV 505
           +DF ASLPENDCRYAVYDFD+VTSENCQKSKIFFIAWSP+TSRIRAKMLYATSKDRFRR 
Sbjct: 61  EDFAASLPENDCRYAVYDFDFVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRE 120

Query: 506 LDGIHYEIQATDPTEMDLEVLRERAN 583
           LDGIHYEIQATDPTEMDLEV+RERAN
Sbjct: 121 LDGIHYEIQATDPTEMDLEVIRERAN 146


>gb|AAD23407.1| actin depolymerizing factor [Populus tremula x Populus alba]
          Length = 138

 Score =  240 bits (613), Expect = 3e-61
 Identities = 118/137 (86%), Positives = 123/137 (89%)
 Frame = +2

Query: 173 NASSGMGVADHSTGTFMELQRKKVHRYVIFKIDXXXXXXXXXXTGGPAESYDDFTASLPE 352
           NASSGMGVADHS   F+ELQRKKVHRYVIFKID          TGGPAESY+DFTASLPE
Sbjct: 2   NASSGMGVADHSKIAFVELQRKKVHRYVIFKIDEKKKEVVVEKTGGPAESYEDFTASLPE 61

Query: 353 NDCRYAVYDFDYVTSENCQKSKIFFIAWSPATSRIRAKMLYATSKDRFRRVLDGIHYEIQ 532
           NDCRYAVYDFD+VTSENCQKSKIFFIAWSP+TSRIRAKMLYATSKDRFRR LDGIHYEIQ
Sbjct: 62  NDCRYAVYDFDFVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQ 121

Query: 533 ATDPTEMDLEVLRERAN 583
           ATDPTEMDLEV+RERAN
Sbjct: 122 ATDPTEMDLEVIRERAN 138


>ref|XP_002524620.1| actin depolymerizing factor, putative [Ricinus communis]
           gi|223536173|gb|EEF37828.1| actin depolymerizing factor,
           putative [Ricinus communis]
          Length = 146

 Score =  239 bits (610), Expect = 6e-61
 Identities = 118/146 (80%), Positives = 126/146 (86%), Gaps = 3/146 (2%)
 Frame = +2

Query: 155 MSFR---MSNASSGMGVADHSTGTFMELQRKKVHRYVIFKIDXXXXXXXXXXTGGPAESY 325
           MSFR     NA+SGMGVADHS  TF+ELQRKKVHRYV+FKID          TGGPAESY
Sbjct: 1   MSFRGISRPNATSGMGVADHSINTFLELQRKKVHRYVVFKIDEKKKEVVVEKTGGPAESY 60

Query: 326 DDFTASLPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPATSRIRAKMLYATSKDRFRRV 505
           +DF ASLP+NDCRYAVYDFD+VTSENCQKSKIFF AWSP+TSRIRAKMLYATSKDRFRR 
Sbjct: 61  EDFAASLPDNDCRYAVYDFDFVTSENCQKSKIFFFAWSPSTSRIRAKMLYATSKDRFRRQ 120

Query: 506 LDGIHYEIQATDPTEMDLEVLRERAN 583
           LDGIHYEIQATDPTEMDLEVLR+RAN
Sbjct: 121 LDGIHYEIQATDPTEMDLEVLRDRAN 146


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