BLASTX nr result
ID: Cimicifuga21_contig00000394
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00000394
(950 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AGE44298.1| whirly transcription factor domain containing pro... 192 1e-46
ref|NP_001045956.1| Os02g0158400 [Oryza sativa Japonica Group] g... 190 4e-46
sp|D9J034.1|WHY2_SOLTU RecName: Full=Single-stranded DNA-bindig ... 182 1e-43
ref|XP_002453336.1| hypothetical protein SORBIDRAFT_04g004060 [S... 181 3e-43
gb|AFW66475.1| DNA binding protein isoform 1 [Zea mays] gi|41392... 180 5e-43
>gb|AGE44298.1| whirly transcription factor domain containing protein [Musa AB
Group]
Length = 245
Score = 192 bits (488), Expect = 1e-46
Identities = 93/150 (62%), Positives = 111/150 (74%), Gaps = 2/150 (1%)
Frame = +1
Query: 118 YTVFKGKAALSCAPSVPSFNLESS--SKYDKKGCVFLTFWPAAGDRKYDWEKKQIFALSP 291
YTVFKGKAALS +P +P+F S S+ KKGCV LTFWPA G RKYDW+KKQ FALSP
Sbjct: 65 YTVFKGKAALSVSPILPTFREVDSGVSRVHKKGCVILTFWPAIGQRKYDWQKKQAFALSP 124
Query: 292 TEIGSLISLEPGKSCEFFHDPSMKSSNAGQIRKQLSVTPLPDDGGYLFXXXXXXXXXXXX 471
TE+GSLI L P +SCEFFHDPSMKSS GQ++K LS++PL D GYL
Sbjct: 125 TEVGSLIGLGPAESCEFFHDPSMKSSLEGQVKKSLSISPLNDKAGYLLNLSVVNNIQKTN 184
Query: 472 ERFSVPVSMAEYTVMRTGFTFVLPHIIGWN 561
ERFS+PVS AE+T +RT F++VLPHI+GW+
Sbjct: 185 ERFSLPVSKAEFTAIRTVFSYVLPHIMGWS 214
>ref|NP_001045956.1| Os02g0158400 [Oryza sativa Japonica Group]
gi|50251252|dbj|BAD28032.1| putative Chain C, Structure
Of The Plant Transcriptional Regulator Pbf-2 [Oryza
sativa Japonica Group] gi|50252182|dbj|BAD28177.1|
putative Chain C, Structure Of The Plant Transcriptional
Regulator Pbf-2 [Oryza sativa Japonica Group]
gi|113535487|dbj|BAF07870.1| Os02g0158400 [Oryza sativa
Japonica Group] gi|215692593|dbj|BAG88013.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|215704516|dbj|BAG94149.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215740785|dbj|BAG96941.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|218190103|gb|EEC72530.1| hypothetical protein
OsI_05924 [Oryza sativa Indica Group]
gi|222622212|gb|EEE56344.1| hypothetical protein
OsJ_05450 [Oryza sativa Japonica Group]
Length = 228
Score = 190 bits (483), Expect = 4e-46
Identities = 100/171 (58%), Positives = 121/171 (70%), Gaps = 3/171 (1%)
Frame = +1
Query: 88 ENGSKKFIPGYTVFKGKAALSCAPSVPSFN-LESS-SKYDKKGCVFLTFWPAAGDRKYDW 261
EN S + YTVFKGKAALS P +PSF+ LES S+ +K G V LTF+PA G RKYD+
Sbjct: 40 ENTSGRKFASYTVFKGKAALSMQPILPSFSKLESGGSRVNKNGSVMLTFFPAVGQRKYDY 99
Query: 262 EKKQIFALSPTEIGSLISLEPGKSCEFFHDPSMKSSNAGQIRKQLSVTPLPDDGGYLFXX 441
KKQ+FALSPTE+GSLISL P +SCEFFHDPSMKSS+ GQ++K LSVTPL +D GY
Sbjct: 100 SKKQLFALSPTEVGSLISLGPAESCEFFHDPSMKSSHEGQVKKSLSVTPLGNDSGYFLNI 159
Query: 442 XXXXXXXXXXERFSVPVSMAEYTVMRTGFTFVLPHIIGWN-*LTKQVPAAS 591
ER S+P+S AE+TVMRT +F LPHI+GW+ LT P+ S
Sbjct: 160 TVLNNLQKTTERLSLPISKAEFTVMRTALSFALPHILGWDQALTNHQPSPS 210
>sp|D9J034.1|WHY2_SOLTU RecName: Full=Single-stranded DNA-bindig protein WHY2,
mitochondrial; AltName: Full=Protein WHIRLY 2;
Short=StWHY2; Flags: Precursor
gi|298359665|gb|ADI77438.1| Why2 protein [Solanum
tuberosum]
Length = 238
Score = 182 bits (462), Expect = 1e-43
Identities = 89/178 (50%), Positives = 117/178 (65%), Gaps = 2/178 (1%)
Frame = +1
Query: 49 GYSLWTRNFISQAENGSKKFIPGYTVFKGKAALSCAPSVPSFNLESSS--KYDKKGCVFL 222
G+S +N ++ A + Y+VFKGKAALS P +P+FN S K +++G + L
Sbjct: 38 GFSTVRQNVVADAGKREGRVFAPYSVFKGKAALSAEPRLPTFNRLDSGGVKLNRRGVIML 97
Query: 223 TFWPAAGDRKYDWEKKQIFALSPTEIGSLISLEPGKSCEFFHDPSMKSSNAGQIRKQLSV 402
TFWP+ G+RKYDWEK+Q+FALS TE+GSLIS+ S EFFHDPSM SSNAGQ+RK LS+
Sbjct: 98 TFWPSVGERKYDWEKRQLFALSATEVGSLISMGTRDSSEFFHDPSMLSSNAGQVRKSLSI 157
Query: 403 TPLPDDGGYLFXXXXXXXXXXXXERFSVPVSMAEYTVMRTGFTFVLPHIIGWN*LTKQ 576
P D GY +RF+VPV+ AE+ VMRT F+F LPHI+GW+ T +
Sbjct: 158 KPNADGSGYFISLSVVNNNLKTNDRFTVPVTTAEFAVMRTAFSFALPHIMGWDRFTNR 215
>ref|XP_002453336.1| hypothetical protein SORBIDRAFT_04g004060 [Sorghum bicolor]
gi|241933167|gb|EES06312.1| hypothetical protein
SORBIDRAFT_04g004060 [Sorghum bicolor]
Length = 230
Score = 181 bits (458), Expect = 3e-43
Identities = 91/160 (56%), Positives = 112/160 (70%), Gaps = 2/160 (1%)
Frame = +1
Query: 88 ENGSKKFIPGYTVFKGKAALSCAPSVPSFN-LESS-SKYDKKGCVFLTFWPAAGDRKYDW 261
+N S K YTVFKGKAALS P +PSF+ LES S+ + G + LTF+PA G RKYD+
Sbjct: 42 DNLSSKKYASYTVFKGKAALSIQPILPSFSKLESGGSRVSRNGSIMLTFFPAVGPRKYDF 101
Query: 262 EKKQIFALSPTEIGSLISLEPGKSCEFFHDPSMKSSNAGQIRKQLSVTPLPDDGGYLFXX 441
KKQ+FALSPTE+GSLISL P +SCEFFHDPSMKSSN G ++K LS+TPL D GY
Sbjct: 102 TKKQLFALSPTEVGSLISLGPAESCEFFHDPSMKSSNEGMVKKSLSITPLGSDSGYFVNI 161
Query: 442 XXXXXXXXXXERFSVPVSMAEYTVMRTGFTFVLPHIIGWN 561
+R SVP++ AE+ VMRT +F LPHI+GW+
Sbjct: 162 TVVNSVEKTNDRLSVPITKAEFAVMRTTLSFALPHIMGWD 201
>gb|AFW66475.1| DNA binding protein isoform 1 [Zea mays]
gi|413926544|gb|AFW66476.1| DNA binding protein isoform
2 [Zea mays]
Length = 274
Score = 180 bits (456), Expect = 5e-43
Identities = 96/168 (57%), Positives = 115/168 (68%), Gaps = 3/168 (1%)
Frame = +1
Query: 91 NGSKKFIPGYTVFKGKAALSCAPSVPSFN-LESS-SKYDKKGCVFLTFWPAAGDRKYDWE 264
N S K YTVFKGKAALS P +PSF+ LES S+ K G V LTF+PA G RKYD+
Sbjct: 85 NLSGKKFASYTVFKGKAALSIHPILPSFSKLESGGSRVSKNGSVMLTFFPAVGQRKYDYT 144
Query: 265 KKQIFALSPTEIGSLISLEPGKSCEFFHDPSMKSSNAGQIRKQLSVTPLPDDGGYLFXXX 444
KKQ+FALSPTE+GSLISL P +SCEFFHDPSMKSSN G ++K LS+TPL D GY
Sbjct: 145 KKQLFALSPTEVGSLISLGPAESCEFFHDPSMKSSNEGTVKKSLSITPLGSDSGYFVNIT 204
Query: 445 XXXXXXXXXERFSVPVSMAEYTVMRTGFTFVLPHIIGWN-*LTKQVPA 585
+R SVP++ AE+ V+RT +F LPHI+GW+ LT PA
Sbjct: 205 VVNSAERTNDRLSVPITKAEFAVIRTTLSFALPHIMGWDQALTNHHPA 252