BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00000383
         (1875 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18334.3| unnamed protein product [Vitis vinifera]              307   5e-81
emb|CAN65705.1| hypothetical protein VITISV_001744 [Vitis vinifera]   296   1e-77
ref|XP_003595491.1| hypothetical protein MTR_2g048340 [Medicago ...   275   2e-71
ref|NP_001045836.1| Os02g0138200 [Oryza sativa Japonica Group] g...   273   2e-70
ref|XP_002522935.1| conserved hypothetical protein [Ricinus comm...   270   1e-69

>emb|CBI18334.3| unnamed protein product [Vitis vinifera]
          Length = 847

 Score =  307 bits (787), Expect = 5e-81
 Identities = 191/440 (43%), Positives = 249/440 (56%), Gaps = 6/440 (1%)
 Frame = +2

Query: 236  LETMRIFVGGIGEKVTEKDLHNTFSSLGTVKGVEFVKTSGRSFAYIHFQPTSQKSLSKLF 415
            + T RIFVGG+GE VT  D++   SSLGTVK V+ ++T GRSFAY+ F P+S KSLSKLF
Sbjct: 181  ITTTRIFVGGLGETVTSDDINKMLSSLGTVKVVDIMRTKGRSFAYLDFLPSSAKSLSKLF 240

Query: 416  SSYNGCVWKGGRLRLEKAKEHYLVRLRREWEEDAELV----HKTNDKPVAVAEENKDIXX 583
            S+YNGC WKGGRL+LEKAKEHYLVRL REW ED EL       + DK   +   +K    
Sbjct: 241  STYNGCFWKGGRLKLEKAKEHYLVRLSREWAEDGELAISQPSNSIDKNTNIVASDK---- 296

Query: 584  XXXXXXXXXXXXXIFFPKLRKVKSVPYSGTGKHKYSFQRIEVPALPIHFCDCEEHCVSSE 763
                         IFFPKLRK+KS+P+SGTGKHKYSFQRIEVP+LP HFCDCEEH     
Sbjct: 297  LKKTVNQEKSQLRIFFPKLRKMKSLPFSGTGKHKYSFQRIEVPSLPTHFCDCEEHSGPPH 356

Query: 764  IAKVKEISDFEDQAGNVNEEELNMMRSVMNKIFSREDNFSTKCSNFIMSTEGGSSNQSTE 943
            IA+ +   D E Q+G +N++ELN+M SVMNKIF RE +                      
Sbjct: 357  IAQKQYFCDPESQSGGMNKDELNVMNSVMNKIFERETDLK-------------------- 396

Query: 944  DFSPNEIDDSPPNGSDADQEDDADNLVTNIVSGGNTKSGLMETGRLKNVSKESNFGKRQP 1123
                   D+   +G+++D  +D DNLV N+ +G + +  L+ +   + +S      ++  
Sbjct: 397  -------DELRVDGNESDLVEDEDNLVINMFTGRH-RMALLGSQEQEAIS----MNQKSR 444

Query: 1124 FNVTSTQNKIKSQNEKNSDLFNFSDTVSKKKPRLLLSDESNRNEFTSTMTKKKGHPETYS 1303
            FN T T          ++D        S KK + L  DES+ NEF S +  KK   +T+S
Sbjct: 445  FNDTWT----------STDGPAPITLPSTKKRKSLHIDESDGNEFLSAIPGKKPSLQTHS 494

Query: 1304 KESTGLLAAQ-PDRKGSSQQLPTSLSWRQNPSWRELVGRTANGSFSISHVLPD-SSMKQN 1477
             +S     AQ  + +   Q+   +LSW Q  SWRELVG   N  F IS +LP   S KQ 
Sbjct: 495  NDSGVQSGAQTSELRPGIQKTTANLSWSQKSSWRELVGDKGNNPFIISDMLPGVGSRKQE 554

Query: 1478 LPKSSGSDISRTGDSKQQKL 1537
              KS G ++    DSK+Q L
Sbjct: 555  QVKSDGRNVHDIIDSKKQNL 574


>emb|CAN65705.1| hypothetical protein VITISV_001744 [Vitis vinifera]
          Length = 654

 Score =  296 bits (758), Expect = 1e-77
 Identities = 193/448 (43%), Positives = 254/448 (56%), Gaps = 14/448 (3%)
 Frame = +2

Query: 236  LETMRIFVGGIGEKVTEKDLHNTFSSLGTVKGVEFVKTSGRSFAYIHFQPTSQKSLSKLF 415
            + T RIFVGG+GE VT  D++   SSLGTVK V+ V+T GRSFAY+ F P+S KSLSKLF
Sbjct: 18   ITTTRIFVGGLGETVTSDDINKMLSSLGTVKVVDIVRTKGRSFAYLDFLPSSAKSLSKLF 77

Query: 416  SSYNGCVWKGGRLRLEKAKEHYLVRLRREWEEDAELV----HKTNDKPVAVAEENKDIXX 583
            S+       GGRL+LEKAKEHYLVRL REW ED EL       + DK   +   +K    
Sbjct: 78   ST-------GGRLKLEKAKEHYLVRLSREWAEDGELAISQPSNSIDKNTNIVSSDK---- 126

Query: 584  XXXXXXXXXXXXXIFFPKLRKVKSVPYSGTGKHKYSFQRIEVPALPIHFCDCEEHCVSSE 763
                         IFFPKLRK+KS+P+SGTGKHKYSFQRIEVP+LP HFCDCEEH     
Sbjct: 127  LKKTVNQEKSQLRIFFPKLRKMKSLPFSGTGKHKYSFQRIEVPSLPTHFCDCEEHSGPPH 186

Query: 764  IAKVKEISDFEDQAGNVNEEELNMMRSVMNKIFSREDNFSTKCSNFIMSTEGGSSNQSTE 943
            IA+ +   D E Q+G +N++ELNMM SVMNKIF RE +     +   ++  G  S +ST 
Sbjct: 187  IAQKQYFCDPEPQSGGMNKDELNMMNSVMNKIFERETDLKVAYNVTGLTKGGHDSLKSTN 246

Query: 944  D--FSPNEIDDSPP------NGSDADQEDDADNLVTNIVSGGNTKSGLMETGRLKNVSKE 1099
            +     NE D +        +G+++D  +D DNLV N+ +G + +  L+ +   + +S  
Sbjct: 247  ERLIDDNESDHAADEDELRVDGNESDLAEDEDNLVINMFTGRH-RMALLGSQEQEAIS-- 303

Query: 1100 SNFGKRQPFNVTSTQNKIKSQNEKNSDLFNFSDTVSKKKPRLLLSDESNRNEFTSTMTKK 1279
                ++  FN T T          ++D        S KK + L  DES+ NEF S +  K
Sbjct: 304  --MNQKSRFNDTWT----------STDGPAPITLPSTKKRKSLHIDESDGNEFLSAIPGK 351

Query: 1280 KGHPETYSKESTGLLAAQ-PDRKGSSQQLPTSLSWRQNPSWRELVGRTANGSFSISHVLP 1456
            K   +T+S +S     AQ  + +   Q+   +LSW Q  SWRELVG   N  F IS +LP
Sbjct: 352  KPSLQTHSNDSGVQSGAQTSELRPGIQKTTANLSWSQKSSWRELVGDKGNNPFIISDMLP 411

Query: 1457 D-SSMKQNLPKSSGSDISRTGDSKQQKL 1537
               S KQ   KS G ++    DSK+Q L
Sbjct: 412  GVGSRKQEQVKSDGRNVHDIIDSKKQNL 439


>ref|XP_003595491.1| hypothetical protein MTR_2g048340 [Medicago truncatula]
            gi|124360045|gb|ABN08061.1| RNA-binding region RNP-1 (RNA
            recognition motif); Pyridoxal-dependent decarboxylase
            [Medicago truncatula] gi|355484539|gb|AES65742.1|
            hypothetical protein MTR_2g048340 [Medicago truncatula]
          Length = 660

 Score =  275 bits (704), Expect = 2e-71
 Identities = 178/464 (38%), Positives = 248/464 (53%), Gaps = 17/464 (3%)
 Frame = +2

Query: 242  TMRIFVGGIGEKVTEKDLHNTFSSLGTVKGVEFVKTSGRSFAYIHFQPTSQKSLSKLFSS 421
            T+RIFVGGIGE VT  D+   F SLG+V+ +E ++T GRS AY+ F   S KSLSKLFS 
Sbjct: 10   TVRIFVGGIGEAVTSDDIRRLFESLGSVQSLETIRTKGRSLAYLDFLADS-KSLSKLFSK 68

Query: 422  YNGCVWKGGRLRLEKAKEHYLVRLRREWEEDAELVHKTNDKPVAVAEEN--KDIXXXXXX 595
            YNGCVWKGG+L+LEKAKEHYL RL++EWEEDA L  +     V+  +E+  K+       
Sbjct: 69   YNGCVWKGGKLKLEKAKEHYLDRLKKEWEEDAILSIEPPASDVSTHKEDLVKEKPNARRI 128

Query: 596  XXXXXXXXXIFFPKLRKVKSVPYSGTGKHKYSFQRIEVPALPIHFCDCEEHCVSSEIAKV 775
                     I+FP+LR VKS+P+SGTGKHKYSFQ I+V  LP+HFCDCEEHC      K 
Sbjct: 129  VDPDAKPLNIYFPRLRTVKSIPFSGTGKHKYSFQNIKVGPLPVHFCDCEEHCSPFITKKE 188

Query: 776  K-----EISDFEDQAGNVNEEELNMMRSVMNKIFSREDNFSTKCSNFIMSTEGGSSNQST 940
            K     E    + + G +N+EE+N+M +VMNK+  +E   +TK          G  + S 
Sbjct: 189  KLSMNGETEREKSEIGGINDEEINIMNAVMNKLLEKEKVSNTK--------HLGKKHDSF 240

Query: 941  EDFSPNEIDDSPPNGSDADQEDDADNLVTNIVSGGNTKSGLMETGRLKNV------SKES 1102
            E  S    ++   + +  D +DD D+L+TNI +  N K+ L  T  L+ +      S ++
Sbjct: 241  ESLSVIHSNECEVDSATDDGDDDDDDLITNIATKKN-KAALTGTEELERIMESQEWSNKT 299

Query: 1103 NFGKRQPFNVTSTQNKIKSQNEKNSDLFNFSDTVSKKKPRLLLSDESNRNEFTSTMTKKK 1282
            N  + +P      Q + KS + K             KK + L   ES  N   S+    K
Sbjct: 300  NIAEEEP---VEAQKRSKSNSNK------------VKKRKSLSKSESESNGVASSTPVGK 344

Query: 1283 GHPETYSKE-STGLLAAQPDRK-GSSQQLPTSLSWRQNPSWRELVGRTANGSFSISHVLP 1456
               +T   E  +G    +P+   G S      +SW Q  SWRELVG+  N SFS S + P
Sbjct: 345  SKMQTLLDEVGSGAKPTEPEYDFGES----AKVSWSQKSSWRELVGKGGNASFSASLISP 400

Query: 1457 --DSSMKQNLPKSSGSDISRTGDSKQQKLRKQARCKPANSEPIE 1582
              DS+  Q     S +  S   +++  +  +    +P N++ IE
Sbjct: 401  KFDSADDQQNSDGSYTSSSTNDETEDMESDEYPESEPTNTKVIE 444


>ref|NP_001045836.1| Os02g0138200 [Oryza sativa Japonica Group]
            gi|42409268|dbj|BAD10531.1| RNA recognition motif
            (RRM)-containing protein-like [Oryza sativa Japonica
            Group] gi|113535367|dbj|BAF07750.1| Os02g0138200 [Oryza
            sativa Japonica Group] gi|125538008|gb|EAY84403.1|
            hypothetical protein OsI_05779 [Oryza sativa Indica
            Group] gi|125580747|gb|EAZ21678.1| hypothetical protein
            OsJ_05309 [Oryza sativa Japonica Group]
            gi|215694017|dbj|BAG89216.1| unnamed protein product
            [Oryza sativa Japonica Group]
          Length = 552

 Score =  273 bits (697), Expect = 2e-70
 Identities = 178/489 (36%), Positives = 258/489 (52%), Gaps = 26/489 (5%)
 Frame = +2

Query: 248  RIFVGGIGEKVTEKDLHNTFSSLGTVKGVEFVKTSGRSFAYIHFQPTSQKSLSKLFSSYN 427
            RIFVGGI E V   DL   F+S+G V GVEFV+T+GRSFAY+ F   S K+L+KLFS+YN
Sbjct: 17   RIFVGGISEGVAAADLEAMFASVGRVAGVEFVRTNGRSFAYVDFHCPSDKALAKLFSTYN 76

Query: 428  GCVWKGGRLRLEKAKEHYLVRLRREWEEDAELVHKTNDKPVAVAEENKDIXXXXXXXXXX 607
            GC WKGG+LRLEKAKEHYL RL+REWE++A       + P +   E+K            
Sbjct: 77   GCKWKGGKLRLEKAKEHYLTRLKREWEQEAA---AAQEMPASADVESKKEKLELNKAVLD 133

Query: 608  XXXXXIFFPKLRKVKSVPYSGTGKHKYSFQRIEVPALPIHFCDCEEHCVSSEIAKVKEIS 787
                 I+FPKLRKVK++P+ GTGKHKYSF+ IEVP+ PIHFCDCEEHC   E A  +  S
Sbjct: 134  STKINIYFPKLRKVKALPFKGTGKHKYSFRHIEVPSYPIHFCDCEEHCGPPEAANDEYAS 193

Query: 788  DFEDQAGNVNEEELNMMRSVMNKIFSREDNF--STKCSN----FIMSTEGGSSNQ----S 937
              +  A    E+E ++M SVM+K+F +E++   S +  N    F  +    + N+     
Sbjct: 194  VLDAAA---YEKERSIMNSVMSKLFEKENDHLDSMEIQNHGVDFDAAEPSNARNELQMDK 250

Query: 938  TEDFSPNEIDDSPPNGSDADQEDDADNLVTNIVSGGNTKSGLMETGRLKNVSKESNFGKR 1117
             E+ S  ++DD      D   E++ D+LV NIV+     S        +   K+S F KR
Sbjct: 251  REETSEEDLDDQMEETED-PSEEELDDLVLNIVTCKPKSSVAQLNSEKQAADKDSRFRKR 309

Query: 1118 QPFNVTSTQNKIKSQNEKNSDLFNFSDTVSKKKPRLLLSDESNRNEFTSTMTKK------ 1279
            Q F  +S Q + KS         +FS+T ++K+    +S      + +S ++ K      
Sbjct: 310  QQFEESSLQKRHKSS--------DFSETRNRKQSFPAISGAIQNEQKSSDLSGKGTHEFS 361

Query: 1280 ---KGHPETYSKESTGLLAAQPDRKGSSQQL----PTSLS-WRQNPSWRELVGRTANGSF 1435
                G   + S +    LA    R GS Q      P  +S W Q  +WR+LVG   + SF
Sbjct: 362  SELDGDKSSASVQDVEALADSSTRNGSEQNSLASEPKRVSLWTQKSAWRDLVGGMGSASF 421

Query: 1436 SISHVLPDSSMKQNLPKSSGSDISRTGDSKQQKLRKQARCKPANS--EPIEVTQDEVLQD 1609
            S+S +LP+++     PK     +S   ++       + + KP+    +P E     + + 
Sbjct: 422  SLSQILPNTNPAP--PK-----VSNATEASASHAESRTKVKPSGKSLKPSEAATQLLPEQ 474

Query: 1610 KVSTDVLSI 1636
            K+ T  +++
Sbjct: 475  KMPTSSMAM 483


>ref|XP_002522935.1| conserved hypothetical protein [Ricinus communis]
            gi|223537829|gb|EEF39446.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 636

 Score =  270 bits (690), Expect = 1e-69
 Identities = 168/441 (38%), Positives = 241/441 (54%), Gaps = 11/441 (2%)
 Frame = +2

Query: 239  ETMRIFVGGIGEKVTEKDLHNTFSSLGT-VKGVEFVKTSGRSFAYIHFQPTSQKSLSKLF 415
            E +RI VGG+GE VT  DL N  S +G   + V+ ++T GRSFAYI F P+S  +L KLF
Sbjct: 12   ERVRIHVGGLGENVTRDDLCNLLSKVGIGFQSVDIIRTKGRSFAYIDFLPSSVSALPKLF 71

Query: 416  SSYNGCVWKGGRLRLEKAKEHYLVRLRREWEEDAELVHKT--NDKPVAVAEENKDIXXXX 589
            ++YNGCVWKGGRL+L+KAKEHYL RL+REW EDA+L + T  +D      ++ +      
Sbjct: 72   NTYNGCVWKGGRLKLDKAKEHYLDRLKREWAEDAQLANSTCSDDVNNDADKQMESPRKTK 131

Query: 590  XXXXXXXXXXXIFFPKLRKVKSVPYSGTGKHKYSFQRIEVPALPIHFCDCEEHCVSSEIA 769
                       +FFP+L+K+KS+P+SGTGKHKYSF+R+EVP+LP+HFCDCEEH  S    
Sbjct: 132  KDLSLDKKQLRLFFPRLQKLKSIPFSGTGKHKYSFRRVEVPSLPLHFCDCEEHSGSLHAP 191

Query: 770  KVKEISDFEDQAGNVNEEELNMMRSVMNKIFSREDNFSTKCSNFIMSTEGGSSNQST--E 943
            K K+I   E+Q G VN+EEL++M SVMN++F  E+          +S    S N+ T  E
Sbjct: 192  KGKQIPVLEEQGGGVNQEELDLMISVMNRLFEIEN----------VSGAPHSDNELTKEE 241

Query: 944  DFSPNEIDDSPPNGSDADQEDDADNLVTNIVSGGNTKSGLMETGRLKNVS---KESNFGK 1114
            D++ N  D+   + S+     D D+L+ N+VS            R K  +   +ES   K
Sbjct: 242  DYNTNATDNPQLDESEGYSTADEDDLIINVVS------------RRKETAFSNQESKLNK 289

Query: 1115 RQPFNVTSTQNKIKSQNEKNSDLFNFSDTVSKKKPRLLLSDESNRNEFTSTMTKKKGHPE 1294
            RQ       Q  ++ +   +                     E++ N + S  ++ KG  +
Sbjct: 290  RQASEDRPAQEVLRKRTRNDK--------------------ENDTNNYVSVASQGKGSLQ 329

Query: 1295 TYSKESTGLLAAQPDRKGSS--QQLPTSLSWRQNPSWRELVGRTANGSFSISHVLPD-SS 1465
              S    G+L+     +  S  +Q    +SW Q  SWRELVG   N + SIS +LP  S+
Sbjct: 330  APSN-GPGMLSGDQLIESQSIVKQSAPGVSWSQKSSWRELVGNRNNNAISISDILPGISA 388

Query: 1466 MKQNLPKSSGSDISRTGDSKQ 1528
             K+   KS+ +  S  G +K+
Sbjct: 389  NKEEETKSAATLNSNKGKNKE 409