BLASTX nr result

ID: Cimicifuga21_contig00000381 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00000381
         (659 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281037.1| PREDICTED: 60S ribosomal protein L30 [Vitis ...   223   2e-56
ref|XP_002313617.1| predicted protein [Populus trichocarpa] gi|2...   218   1e-54
gb|ADB02906.1| 60S ribosomal protein L30 [Jatropha curcas]            217   2e-54
ref|XP_002528991.1| 60S ribosomal protein L30, putative [Ricinus...   216   2e-54
gb|AFK43355.1| unknown [Lotus japonicus]                              216   3e-54

>ref|XP_002281037.1| PREDICTED: 60S ribosomal protein L30 [Vitis vinifera]
           gi|296082469|emb|CBI21474.3| unnamed protein product
           [Vitis vinifera]
          Length = 112

 Score =  223 bits (568), Expect = 2e-56
 Identities = 109/112 (97%), Positives = 110/112 (98%)
 Frame = -3

Query: 582 MVATKKTKKTHESINNRLALVMKSGKYTLGYKTVLDSLRSSKGKLIIISNNCPPLRKSEI 403
           MVA KKTKKTHESINNRLALVMKSGKYTLGYKTVL SLRSSKGKLI+ISNNCPPLRKSEI
Sbjct: 1   MVAGKKTKKTHESINNRLALVMKSGKYTLGYKTVLKSLRSSKGKLILISNNCPPLRKSEI 60

Query: 402 EYYAMLAKVGVHHFNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKTLPGDH 247
           EYYAMLAKVGVHHFNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKTLPGDH
Sbjct: 61  EYYAMLAKVGVHHFNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKTLPGDH 112


>ref|XP_002313617.1| predicted protein [Populus trichocarpa]
           gi|224131730|ref|XP_002328094.1| predicted protein
           [Populus trichocarpa] gi|118483895|gb|ABK93838.1|
           unknown [Populus trichocarpa]
           gi|222837609|gb|EEE75974.1| predicted protein [Populus
           trichocarpa] gi|222850025|gb|EEE87572.1| predicted
           protein [Populus trichocarpa]
          Length = 112

 Score =  218 bits (554), Expect = 1e-54
 Identities = 105/112 (93%), Positives = 109/112 (97%)
 Frame = -3

Query: 582 MVATKKTKKTHESINNRLALVMKSGKYTLGYKTVLDSLRSSKGKLIIISNNCPPLRKSEI 403
           MVA KKTKKTHESINNRLALVMKSGKYTLGYKTVL SLR+SKGKLIIISNNCPPLRKSEI
Sbjct: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKSLRNSKGKLIIISNNCPPLRKSEI 60

Query: 402 EYYAMLAKVGVHHFNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKTLPGDH 247
           EYYAMLAKVGVHH+NGNNVDLGTACGKYFRV CLSIIDPGDSDIIK++PGDH
Sbjct: 61  EYYAMLAKVGVHHYNGNNVDLGTACGKYFRVCCLSIIDPGDSDIIKSVPGDH 112


>gb|ADB02906.1| 60S ribosomal protein L30 [Jatropha curcas]
          Length = 112

 Score =  217 bits (552), Expect = 2e-54
 Identities = 104/112 (92%), Positives = 110/112 (98%)
 Frame = -3

Query: 582 MVATKKTKKTHESINNRLALVMKSGKYTLGYKTVLDSLRSSKGKLIIISNNCPPLRKSEI 403
           MV+ KKTKKTHESINNRLALVMKSG+YTLGYKTVL SLRSSKGKLI+ISNNCPPLRKSEI
Sbjct: 1   MVSGKKTKKTHESINNRLALVMKSGRYTLGYKTVLRSLRSSKGKLIVISNNCPPLRKSEI 60

Query: 402 EYYAMLAKVGVHHFNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKTLPGDH 247
           EYYAML+KVGVHH+NGNNVDLGTACGKYFRVSCLSIIDPGDSDIIK+LPGDH
Sbjct: 61  EYYAMLSKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKSLPGDH 112


>ref|XP_002528991.1| 60S ribosomal protein L30, putative [Ricinus communis]
           gi|223531581|gb|EEF33410.1| 60S ribosomal protein L30,
           putative [Ricinus communis]
          Length = 112

 Score =  216 bits (551), Expect = 2e-54
 Identities = 104/112 (92%), Positives = 109/112 (97%)
 Frame = -3

Query: 582 MVATKKTKKTHESINNRLALVMKSGKYTLGYKTVLDSLRSSKGKLIIISNNCPPLRKSEI 403
           M A KKTKKTHESINNRLALVMKSGKYTLGYKTVL SLR+SKGKLIIISNNCPPLRKSEI
Sbjct: 1   MAAGKKTKKTHESINNRLALVMKSGKYTLGYKTVLRSLRTSKGKLIIISNNCPPLRKSEI 60

Query: 402 EYYAMLAKVGVHHFNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKTLPGDH 247
           EYYAML+KVGVHH+NGNNVDLGTACGKYFRVSCLSI+DPGDSDIIK+LPGDH
Sbjct: 61  EYYAMLSKVGVHHYNGNNVDLGTACGKYFRVSCLSIVDPGDSDIIKSLPGDH 112


>gb|AFK43355.1| unknown [Lotus japonicus]
          Length = 112

 Score =  216 bits (550), Expect = 3e-54
 Identities = 105/111 (94%), Positives = 108/111 (97%)
 Frame = -3

Query: 582 MVATKKTKKTHESINNRLALVMKSGKYTLGYKTVLDSLRSSKGKLIIISNNCPPLRKSEI 403
           MVA KKTKKTHESINNRLALVMKSGKYTLGYKTVL SLRSSKGKLIII+NNCPPLRKSEI
Sbjct: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKSLRSSKGKLIIIANNCPPLRKSEI 60

Query: 402 EYYAMLAKVGVHHFNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKTLPGD 250
           EYYAMLAKVGVHH+NGNNVDLGTACGKY+RV CLSIIDPGDSDIIKTLPGD
Sbjct: 61  EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIDPGDSDIIKTLPGD 111


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