BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00000357
         (865 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACF06506.1| RNA polymerase [Elaeis guineensis]                     228   2e-57
dbj|BAD54456.1| putative RNA polymerase I, II and III 16.5 kDa s...   205   9e-51
gb|EAZ02226.1| hypothetical protein OsI_24321 [Oryza sativa Indi...   205   9e-51
gb|ABK26380.1| unknown [Picea sitchensis]                             202   6e-50
ref|XP_002466106.1| hypothetical protein SORBIDRAFT_01g001330 [S...   199   7e-49

>gb|ACF06506.1| RNA polymerase [Elaeis guineensis]
          Length = 145

 Score =  228 bits (580), Expect = 2e-57
 Identities = 111/145 (76%), Positives = 127/145 (87%)
 Frame = -2

Query: 795 MVEILFEDIFSLEALNPDGKKFDKVSRIVAQSEQFNSKLQLDVNTEVYPLHVGEKFTMML 616
           MVE+LFEDIF+L  ++PDGKKFDKVSRI A+SEQF+  +QLDVNTE+YPLHVG+KFTM+L
Sbjct: 1   MVELLFEDIFTLTRIDPDGKKFDKVSRIEARSEQFDMYMQLDVNTEIYPLHVGDKFTMVL 60

Query: 615 APTLSLDGTPDTGYYAAGARKSLADKFEYVMHGKLYKIADNGSDRNVTVEVYASFGGLLM 436
           APTLSLDGTPD+GYY  G RKSLADKFEYVMHGKLYKI++  S  NV VE+YASFGGLLM
Sbjct: 61  APTLSLDGTPDSGYYMQGQRKSLADKFEYVMHGKLYKISEESSGPNVKVEIYASFGGLLM 120

Query: 435 KLSGEPNIAKKFELDQRLFLLMRKV 361
            L G+P+ A  FELDQRLFLLMRKV
Sbjct: 121 MLKGDPSNATNFELDQRLFLLMRKV 145


>dbj|BAD54456.1| putative RNA polymerase I, II and III 16.5 kDa subunit [Oryza
           sativa Japonica Group]
          Length = 396

 Score =  205 bits (522), Expect = 9e-51
 Identities = 101/147 (68%), Positives = 123/147 (83%), Gaps = 1/147 (0%)
 Frame = -2

Query: 798 KMVEILFEDIFSLEALNPDGKKFDKVSRIVAQSEQFNSKLQLDVNTEVYPLHVGEKFTMM 619
           KMVE LFEDIF++  L+PDGKKFD+VSRI A+SEQF+  +QLDV TEVYP+  G++FTM+
Sbjct: 250 KMVEHLFEDIFTVTRLDPDGKKFDRVSRIEARSEQFDMYMQLDVATEVYPMRAGDRFTMV 309

Query: 618 LAPTLSLDGTPDTGYYAAGARKSLADKFEYVMHGKLYKIADNGSDRNVT-VEVYASFGGL 442
           LAPTL+LDGTPDTG+Y    RK+LADKF+YVMHGKLYKI+++ S    T VE+YASFGGL
Sbjct: 310 LAPTLNLDGTPDTGFYTQAGRKTLADKFDYVMHGKLYKISEDSSSGQATKVEIYASFGGL 369

Query: 441 LMKLSGEPNIAKKFELDQRLFLLMRKV 361
           LM L G+P+ A  FELDQRLFLL+RKV
Sbjct: 370 LMMLKGDPSSAASFELDQRLFLLIRKV 396


>gb|EAZ02226.1| hypothetical protein OsI_24321 [Oryza sativa Indica Group]
           gi|125598367|gb|EAZ38147.1| hypothetical protein
           OsJ_22498 [Oryza sativa Japonica Group]
          Length = 191

 Score =  205 bits (522), Expect = 9e-51
 Identities = 101/147 (68%), Positives = 123/147 (83%), Gaps = 1/147 (0%)
 Frame = -2

Query: 798 KMVEILFEDIFSLEALNPDGKKFDKVSRIVAQSEQFNSKLQLDVNTEVYPLHVGEKFTMM 619
           KMVE LFEDIF++  L+PDGKKFD+VSRI A+SEQF+  +QLDV TEVYP+  G++FTM+
Sbjct: 45  KMVEHLFEDIFTVTRLDPDGKKFDRVSRIEARSEQFDMYMQLDVATEVYPMRAGDRFTMV 104

Query: 618 LAPTLSLDGTPDTGYYAAGARKSLADKFEYVMHGKLYKIADNGSDRNVT-VEVYASFGGL 442
           LAPTL+LDGTPDTG+Y    RK+LADKF+YVMHGKLYKI+++ S    T VE+YASFGGL
Sbjct: 105 LAPTLNLDGTPDTGFYTQAGRKTLADKFDYVMHGKLYKISEDSSSGQATKVEIYASFGGL 164

Query: 441 LMKLSGEPNIAKKFELDQRLFLLMRKV 361
           LM L G+P+ A  FELDQRLFLL+RKV
Sbjct: 165 LMMLKGDPSSAASFELDQRLFLLIRKV 191


>gb|ABK26380.1| unknown [Picea sitchensis]
          Length = 145

 Score =  202 bits (515), Expect = 6e-50
 Identities = 99/145 (68%), Positives = 120/145 (82%)
 Frame = -2

Query: 795 MVEILFEDIFSLEALNPDGKKFDKVSRIVAQSEQFNSKLQLDVNTEVYPLHVGEKFTMML 616
           MVE+LFEDIF++  ++PDGKKFDKVSRI A+SEQF+  + LDVN +VYP+ VGEKF + L
Sbjct: 1   MVELLFEDIFTVTRIDPDGKKFDKVSRIEARSEQFDMYMLLDVNIDVYPVSVGEKFAVAL 60

Query: 615 APTLSLDGTPDTGYYAAGARKSLADKFEYVMHGKLYKIADNGSDRNVTVEVYASFGGLLM 436
           APTL+LDGTPD GY+  G RKSLADK+EYVM+GKLY +++ GS  NV VE+ ASFGGLLM
Sbjct: 61  APTLNLDGTPDNGYFIQGGRKSLADKYEYVMYGKLYNLSEEGSGANVKVEINASFGGLLM 120

Query: 435 KLSGEPNIAKKFELDQRLFLLMRKV 361
            L G+P+ A  FELDQRLFLLMRKV
Sbjct: 121 LLKGDPSNAGNFELDQRLFLLMRKV 145


>ref|XP_002466106.1| hypothetical protein SORBIDRAFT_01g001330 [Sorghum bicolor]
           gi|241919960|gb|EER93104.1| hypothetical protein
           SORBIDRAFT_01g001330 [Sorghum bicolor]
          Length = 145

 Score =  199 bits (506), Expect = 7e-49
 Identities = 98/145 (67%), Positives = 115/145 (79%)
 Frame = -2

Query: 795 MVEILFEDIFSLEALNPDGKKFDKVSRIVAQSEQFNSKLQLDVNTEVYPLHVGEKFTMML 616
           M E LFED F +  L+PDGKKFDKVSR+ A+SEQ    +QLDV T+VYPL  GEKF M+L
Sbjct: 1   MSEHLFEDTFIVSRLDPDGKKFDKVSRVEARSEQLGMYMQLDVATDVYPLRAGEKFNMVL 60

Query: 615 APTLSLDGTPDTGYYAAGARKSLADKFEYVMHGKLYKIADNGSDRNVTVEVYASFGGLLM 436
           APTL+LDGTPDTGYY    RK+LAD +EYVM GKLYKI+++ S +N  VE+YASFGGLLM
Sbjct: 61  APTLNLDGTPDTGYYTQAGRKTLADNYEYVMQGKLYKISEDTSSQNAKVEIYASFGGLLM 120

Query: 435 KLSGEPNIAKKFELDQRLFLLMRKV 361
            L G+P+ A  FELDQRLFLLMRKV
Sbjct: 121 LLRGDPSTAASFELDQRLFLLMRKV 145