BLASTX nr result

ID: Cimicifuga21_contig00000278 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00000278
         (1039 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003519018.1| PREDICTED: 40S ribosomal protein S5-like [Gl...   355   1e-95
ref|XP_003533901.1| PREDICTED: 40S ribosomal protein S5-like [Gl...   355   1e-95
ref|XP_002534312.1| 40S ribosomal protein S5, putative [Ricinus ...   354   2e-95
gb|AFK39266.1| unknown [Lotus japonicus]                              353   3e-95
ref|XP_002531594.1| 40S ribosomal protein S5, putative [Ricinus ...   352   7e-95

>ref|XP_003519018.1| PREDICTED: 40S ribosomal protein S5-like [Glycine max]
          Length = 204

 Score =  355 bits (911), Expect = 1e-95
 Identities = 180/188 (95%), Positives = 184/188 (97%)
 Frame = -3

Query: 875 KLFNRWSFEDVQVADLSLADYIGVQSSKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSL 696
           KLFNRWSFEDV+V D+SLADYIGV  SKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSL
Sbjct: 17  KLFNRWSFEDVEVNDMSLADYIGVSPSKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSL 76

Query: 695 MMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVNSGPREDATRIGSAGVVRR 516
           MMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAV+NSGPREDATRIGSAGVVRR
Sbjct: 77  MMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVINSGPREDATRIGSAGVVRR 136

Query: 515 QAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAHKGSSNSYAIKKKDEI 336
           QAVDISPLRRVNQAIYLLTTGARE+AFRNIKTIAECLADELINA KGSSNSYAIKKKDEI
Sbjct: 137 QAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEI 196

Query: 335 ERVAKANR 312
           ERVAKANR
Sbjct: 197 ERVAKANR 204


>ref|XP_003533901.1| PREDICTED: 40S ribosomal protein S5-like [Glycine max]
          Length = 204

 Score =  355 bits (910), Expect = 1e-95
 Identities = 179/188 (95%), Positives = 184/188 (97%)
 Frame = -3

Query: 875 KLFNRWSFEDVQVADLSLADYIGVQSSKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSL 696
           KLFNRWSF+DV+V D+SLADYIGV  SKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSL
Sbjct: 17  KLFNRWSFDDVEVTDMSLADYIGVSPSKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSL 76

Query: 695 MMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVNSGPREDATRIGSAGVVRR 516
           MMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAV+NSGPREDATRIGSAGVVRR
Sbjct: 77  MMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVINSGPREDATRIGSAGVVRR 136

Query: 515 QAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAHKGSSNSYAIKKKDEI 336
           QAVDISPLRRVNQAIYLLTTGARE+AFRNIKTIAECLADELINA KGSSNSYAIKKKDEI
Sbjct: 137 QAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEI 196

Query: 335 ERVAKANR 312
           ERVAKANR
Sbjct: 197 ERVAKANR 204


>ref|XP_002534312.1| 40S ribosomal protein S5, putative [Ricinus communis]
           gi|223525513|gb|EEF28068.1| 40S ribosomal protein S5,
           putative [Ricinus communis]
          Length = 209

 Score =  354 bits (909), Expect = 2e-95
 Identities = 178/188 (94%), Positives = 185/188 (98%)
 Frame = -3

Query: 875 KLFNRWSFEDVQVADLSLADYIGVQSSKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSL 696
           KLFNRW+FEDVQV D+SL+DYIG+Q +KHATYVPHTAGRYSVKRFRKAQCPIVERLTNSL
Sbjct: 22  KLFNRWTFEDVQVNDISLSDYIGIQPAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSL 81

Query: 695 MMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVNSGPREDATRIGSAGVVRR 516
           MMHGRNNGKKLMAVRI+KHAMEIIHLLTDLNPIQVIVDAVVNSGPREDATRIGSAGVVRR
Sbjct: 82  MMHGRNNGKKLMAVRIVKHAMEIIHLLTDLNPIQVIVDAVVNSGPREDATRIGSAGVVRR 141

Query: 515 QAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAHKGSSNSYAIKKKDEI 336
           QAVDISPLRRVNQAIYLLTTGARE+AFRNIKTIAECLADELINA KGSSNSYAIKKKDEI
Sbjct: 142 QAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEI 201

Query: 335 ERVAKANR 312
           ERVAKANR
Sbjct: 202 ERVAKANR 209


>gb|AFK39266.1| unknown [Lotus japonicus]
          Length = 204

 Score =  353 bits (907), Expect = 3e-95
 Identities = 176/188 (93%), Positives = 185/188 (98%)
 Frame = -3

Query: 875 KLFNRWSFEDVQVADLSLADYIGVQSSKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSL 696
           KLFNRWS++DVQV D+SLADY+GV +SKHATYVPHTAGRYSVKRFRKAQCPI+ERLTNSL
Sbjct: 17  KLFNRWSYDDVQVTDISLADYVGVVASKHATYVPHTAGRYSVKRFRKAQCPIIERLTNSL 76

Query: 695 MMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVNSGPREDATRIGSAGVVRR 516
           MMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNP+QVIVDAV+NSGPREDATRIGSAGVVRR
Sbjct: 77  MMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPVQVIVDAVINSGPREDATRIGSAGVVRR 136

Query: 515 QAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAHKGSSNSYAIKKKDEI 336
           QAVDISPLRRVNQAIYLLTTGARE+AFRNIKTIAECLADELINA KGSSNSYAIKKKDEI
Sbjct: 137 QAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEI 196

Query: 335 ERVAKANR 312
           ERVAKANR
Sbjct: 197 ERVAKANR 204


>ref|XP_002531594.1| 40S ribosomal protein S5, putative [Ricinus communis]
           gi|223528790|gb|EEF30797.1| 40S ribosomal protein S5,
           putative [Ricinus communis]
          Length = 211

 Score =  352 bits (904), Expect = 7e-95
 Identities = 178/188 (94%), Positives = 184/188 (97%)
 Frame = -3

Query: 875 KLFNRWSFEDVQVADLSLADYIGVQSSKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSL 696
           KLFNRW+FEDVQV D+SL+DYIGVQ +KHATYVPHTAGRYSVKRFRKAQCPIVERLTNSL
Sbjct: 24  KLFNRWTFEDVQVNDISLSDYIGVQPAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSL 83

Query: 695 MMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVNSGPREDATRIGSAGVVRR 516
           MMHGRNNGKKLMAVRI+KHAMEIIHLLTD NPIQVIVDAVVNSGPREDATRIGSAGVVRR
Sbjct: 84  MMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVVNSGPREDATRIGSAGVVRR 143

Query: 515 QAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAHKGSSNSYAIKKKDEI 336
           QAVDISPLRRVNQAIYLLTTGARE+AFRNIKTIAECLADELINA KGSSNSYAIKKKDEI
Sbjct: 144 QAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEI 203

Query: 335 ERVAKANR 312
           ERVAKANR
Sbjct: 204 ERVAKANR 211


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